FFCP PHASE1:Hg19::chr10:76970762..76970795,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:76970762..76970795,+ to FFCP PHASE1:Hg19::chr10:76970762..76970795,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7417 | |EntrezGene=7417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12672 | |HGNC=12672 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSD1 | |UniProt=Q5JSD1 | ||
|association_with_transcript=0bp_to_ENST00000447677_5end | |||
|cluster_id=chr10:76970762..76970795,+ | |||
|description=CAGE_peak_2_at_VDAC2_5end | |||
|id=chr10:76970762..76970795,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.71e-15!248;CL:0000220!5.05e-15!246;CL:0000359!2.82e-12!32;CL:0000222!1.19e-11!119;CL:0000192!1.25e-11!42;CL:0000514!1.25e-11!42;CL:0000680!1.75e-11!57;CL:0000056!1.75e-11!57;CL:0000355!1.75e-11!57;CL:0000183!9.12e-11!59;CL:0000393!1.07e-10!60;CL:0000211!1.07e-10!60;CL:0000187!1.58e-10!54;CL:0000055!6.40e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.14e-12;32!CL:0000192;3.26e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.87e-15,250;CL:0000359,1.55e-12,32;CL:0000222,6.95e-12,121;CL:0000192,9.15e-12,43;CL:0000514,9.15e-12,43;CL:0000680,1.16e-11,58;CL:0000056,1.16e-11,58;CL:0000355,1.16e-11,58;CL:0000393,7.17e-11,61;CL:0000211,7.17e-11,61;CL:0000187,1.09e-10,55 | |||
|ontology_enrichment_development_v019=CL:0000514;3.26e-09;43!CL:0000355;7.50e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.75e-18!312;UBERON:0000483!3.91e-18!309;UBERON:0000475!2.56e-17!365;UBERON:0000481!3.19e-16!347;UBERON:0000914!3.47e-15!83;UBERON:0002329!3.47e-15!83;UBERON:0003077!3.47e-15!83;UBERON:0003059!3.47e-15!83;UBERON:0007282!3.47e-15!83;UBERON:0009618!3.47e-15!83;UBERON:0007285!3.47e-15!83;UBERON:0000025!2.42e-14!194;UBERON:0000486!6.17e-14!82;UBERON:0004111!6.24e-14!241;UBERON:0000477!6.48e-13!286;UBERON:0004290!7.11e-13!70;UBERON:0000468!1.72e-12!659;UBERON:0001134!4.59e-12!61;UBERON:0002036!4.59e-12!61;UBERON:0003082!4.59e-12!61;UBERON:0000922!1.11e-11!612;UBERON:0004872!1.33e-11!84;UBERON:0001637!2.79e-11!42;UBERON:0003509!2.79e-11!42;UBERON:0004572!2.79e-11!42;UBERON:0002385!3.35e-11!63;UBERON:0001015!3.35e-11!63;UBERON:0000383!3.35e-11!63;UBERON:0000467!4.46e-11!625;UBERON:0000923!5.01e-11!604;UBERON:0005291!5.01e-11!604;UBERON:0006598!5.01e-11!604;UBERON:0002532!5.01e-11!604;UBERON:0000480!6.59e-11!626;UBERON:0005256!7.30e-11!143;UBERON:0002050!8.45e-11!605;UBERON:0005423!8.45e-11!605;UBERON:0004121!2.04e-10!169;UBERON:0000033!5.37e-10!123;UBERON:0001981!6.11e-10!60;UBERON:0007500!6.11e-10!60;UBERON:0004537!6.11e-10!60;UBERON:0006965!6.11e-10!60;UBERON:0003914!7.22e-10!118;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0002049!1.59e-09!79;UBERON:0007798!1.59e-09!79;UBERON:0000055!2.13e-09!69;UBERON:0004573!1.33e-08!33;UBERON:0004571!1.33e-08!33;UBERON:0000064!2.09e-08!219;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0005743!4.59e-08!86;UBERON:0003104!5.76e-08!238;UBERON:0009142!5.76e-08!238;UBERON:0003075!5.97e-08!86;UBERON:0007284!5.97e-08!86;UBERON:0002100!9.49e-08!216;UBERON:0001017!1.23e-07!82;UBERON:0000490!1.24e-07!138;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0001869!1.45e-07!32;UBERON:0001049!2.84e-07!57;UBERON:0005068!2.84e-07!57;UBERON:0006241!2.84e-07!57;UBERON:0007135!2.84e-07!57;UBERON:0002616!2.89e-07!59;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0000073!3.97e-07!94;UBERON:0001016!3.97e-07!94;UBERON:0002346!4.17e-07!90;UBERON:0002619!4.57e-07!22;UBERON:0003056!5.31e-07!61;UBERON:0001893!8.41e-07!34;UBERON:0001950!8.70e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.76e-08;42!UBERON:0003509;2.76e-08;42!UBERON:0004572;2.76e-08;42!UBERON:0004573;6.45e-08;33!UBERON:0004571;6.45e-08;33!UBERON:0001869;8.45e-07;32!UBERON:0002619;9.00e-07;22 | |||
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| ||
|short_description=p2@VDAC2 | |||
}} | }} |
Latest revision as of 09:05, 19 September 2015
Short description: | p2@VDAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VDAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447677_5end |
EntrezGene: | VDAC2 |
HGNC: | 12672 |
UniProt: | Q5JSD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.87e-15 | 250 |
vascular associated smooth muscle cell | 1.55e-12 | 32 |
mesodermal cell | 6.95e-12 | 121 |
smooth muscle cell | 9.15e-12 | 43 |
smooth muscle myoblast | 9.15e-12 | 43 |
muscle precursor cell | 1.16e-11 | 58 |
myoblast | 1.16e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-11 | 58 |
electrically responsive cell | 7.17e-11 | 61 |
electrically active cell | 7.17e-11 | 61 |
muscle cell | 1.09e-10 | 55 |