FFCP PHASE1:Hg19::chr1:19970778..19970796,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4681 | |EntrezGene=4681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7650 | |HGNC=7650 | ||
|TSSclassifier=strong | |||
|UniProt=P41271 | |UniProt=P41271 | ||
|association_with_transcript=-10bp_to_NM_005380_5end | |association_with_transcript=-10bp_to_NM_005380_5end | ||
|cluster_id=chr1:19970778..19970796,+ | |||
|description=CAGE_peak_3_at_NBL1_5end | |description=CAGE_peak_3_at_NBL1_5end | ||
|id=chr1:19970778..19970796,+ | |id=chr1:19970778..19970796,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.97e-12!180;CL:0000183!1.18e-09!59;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000187!3.40e-08!54;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000359!2.57e-07!32 | |ontology_enrichment_celltype=CL:0000055!8.97e-12!180;CL:0000183!1.18e-09!59;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000187!3.40e-08!54;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000359!2.57e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.07e-07;32!CL:0000192;6.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.77e-09,43;CL:0000514,9.77e-09,43;CL:0000187,1.37e-08,55;CL:0000680,6.91e-08,58;CL:0000056,6.91e-08,58;CL:0000355,6.91e-08,58;CL:0000359,2.17e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.03e-25!365;UBERON:0000481!2.37e-20!347;UBERON:0000119!3.32e-20!312;UBERON:0000483!2.47e-19!309;UBERON:0000477!2.47e-18!286;UBERON:0004111!3.17e-16!241;UBERON:0000025!3.41e-14!194;UBERON:0000064!4.75e-14!219;UBERON:0002616!8.18e-12!59;UBERON:0003075!1.28e-11!86;UBERON:0007284!1.28e-11!86;UBERON:0007023!2.37e-11!115;UBERON:0002100!2.40e-11!216;UBERON:0000033!4.20e-11!123;UBERON:0000468!8.34e-11!659;UBERON:0002346!1.32e-10!90;UBERON:0004121!1.72e-10!169;UBERON:0000467!1.97e-10!625;UBERON:0001049!2.40e-10!57;UBERON:0005068!2.40e-10!57;UBERON:0006241!2.40e-10!57;UBERON:0007135!2.40e-10!57;UBERON:0000480!3.79e-10!626;UBERON:0000914!4.31e-10!83;UBERON:0002329!4.31e-10!83;UBERON:0003077!4.31e-10!83;UBERON:0003059!4.31e-10!83;UBERON:0007282!4.31e-10!83;UBERON:0009618!4.31e-10!83;UBERON:0007285!4.31e-10!83;UBERON:0000955!4.36e-10!69;UBERON:0006238!4.36e-10!69;UBERON:0000153!5.35e-10!129;UBERON:0007811!5.35e-10!129;UBERON:0005256!6.21e-10!143;UBERON:0000924!6.96e-10!173;UBERON:0006601!6.96e-10!173;UBERON:0000486!2.21e-09!82;UBERON:0001869!5.04e-09!32;UBERON:0002050!5.34e-09!605;UBERON:0005423!5.34e-09!605;UBERON:0004290!6.21e-09!70;UBERON:0002020!7.11e-09!34;UBERON:0003528!7.11e-09!34;UBERON:0002619!8.38e-09!22;UBERON:0000923!1.07e-08!604;UBERON:0005291!1.07e-08!604;UBERON:0006598!1.07e-08!604;UBERON:0002532!1.07e-08!604;UBERON:0001893!1.27e-08!34;UBERON:0000922!1.66e-08!612;UBERON:0001017!1.70e-08!82;UBERON:0002791!3.63e-08!33;UBERON:0003080!4.44e-08!42;UBERON:0005743!4.76e-08!86;UBERON:0003103!6.33e-08!69;UBERON:0003056!6.56e-08!61;UBERON:0001950!6.77e-08!20;UBERON:0002385!9.51e-08!63;UBERON:0001015!9.51e-08!63;UBERON:0000383!9.51e-08!63;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0003104!1.15e-07!238;UBERON:0009142!1.15e-07!238;UBERON:0002049!1.31e-07!79;UBERON:0007798!1.31e-07!79;UBERON:0003102!1.51e-07!95;UBERON:0000956!2.25e-07!25;UBERON:0000203!2.25e-07!25;UBERON:0000062!3.77e-07!511;UBERON:0001134!5.90e-07!61;UBERON:0002036!5.90e-07!61;UBERON:0003082!5.90e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.99e-09;22!UBERON:0001869;3.10e-08;32!UBERON:0001950;5.28e-08;20!UBERON:0003528;6.92e-08;34!UBERON:0002020;6.92e-08;34!UBERON:0001893;1.41e-07;34!UBERON:0002791;1.42e-07;32!UBERON:0000956;1.51e-07;25!UBERON:0000203;1.51e-07;25 | |||
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| ||
|short_description=p3@NBL1 | |short_description=p3@NBL1 | ||
}} | }} |
Latest revision as of 15:33, 19 September 2015
Short description: | p3@NBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_005380_5end |
EntrezGene: | NBL1 |
HGNC: | 7650 |
UniProt: | P41271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.77e-09 | 43 |
smooth muscle myoblast | 9.77e-09 | 43 |
muscle cell | 1.37e-08 | 55 |
muscle precursor cell | 6.91e-08 | 58 |
myoblast | 6.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.91e-08 | 58 |
vascular associated smooth muscle cell | 2.17e-07 | 32 |