FFCP PHASE1:Hg19::chr1:99730028..99730060,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:99730028..99730060,+
|short_description=p2@LPPR4
|description=CAGE_peak_2_at_LPPR4_5end
|association_with_transcript=0bp_to_AK291369,AK297417,BC042963_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9890 | |EntrezGene=9890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z2D5,B4DMD8,Q86XM6 | |UniProt=Q7Z2D5,B4DMD8,Q86XM6 | ||
|association_with_transcript=0bp_to_AK291369,AK297417,BC042963_5end | |||
|cluster_id=chr1:99730028..99730060,+ | |||
|coexpression_cluster_id=C2606 | |||
|description=CAGE_peak_2_at_LPPR4_5end | |||
|id=chr1:99730028..99730060,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.99e-47!82;UBERON:0000073!2.10e-45!94;UBERON:0001016!2.10e-45!94;UBERON:0005743!1.22e-44!86;UBERON:0001049!1.08e-39!57;UBERON:0005068!1.08e-39!57;UBERON:0006241!1.08e-39!57;UBERON:0007135!1.08e-39!57;UBERON:0007023!3.63e-39!115;UBERON:0000955!4.95e-38!69;UBERON:0006238!4.95e-38!69;UBERON:0002616!2.56e-36!59;UBERON:0003080!4.30e-35!42;UBERON:0002780!8.31e-35!41;UBERON:0001890!8.31e-35!41;UBERON:0006240!8.31e-35!41;UBERON:0001893!2.22e-29!34;UBERON:0002020!4.57e-29!34;UBERON:0003528!4.57e-29!34;UBERON:0002791!1.75e-28!33;UBERON:0001869!2.32e-28!32;UBERON:0003075!3.07e-27!86;UBERON:0007284!3.07e-27!86;UBERON:0002346!1.12e-25!90;UBERON:0004121!9.80e-25!169;UBERON:0000924!6.34e-24!173;UBERON:0006601!6.34e-24!173;UBERON:0000153!1.51e-23!129;UBERON:0007811!1.51e-23!129;UBERON:0000033!6.42e-23!123;UBERON:0003056!7.67e-23!61;UBERON:0000956!1.27e-22!25;UBERON:0000203!1.27e-22!25;UBERON:0002619!1.22e-20!22;UBERON:0001950!7.22e-19!20;UBERON:0000475!8.29e-11!365;UBERON:0000468!1.67e-09!659;UBERON:0002420!1.82e-08!9;UBERON:0007245!1.82e-08!9;UBERON:0010009!1.82e-08!9;UBERON:0010011!1.82e-08!9;UBERON:0000454!1.82e-08!9;UBERON:0001871!3.58e-08!7;UBERON:0002308!7.14e-08!9;UBERON:0000125!7.14e-08!9;UBERON:0000467!1.19e-07!625;UBERON:0000062!1.19e-07!511;UBERON:0000480!1.54e-07!626;UBERON:0001894!8.78e-07!7;UBERON:0006222!8.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.80e-42;32!UBERON:0002791;3.82e-41;32!UBERON:0001893;4.30e-41;34!UBERON:0003528;7.53e-41;34!UBERON:0002020;7.53e-41;34!UBERON:0002780;1.88e-40;41!UBERON:0001890;1.88e-40;41!UBERON:0000956;2.26e-36;25!UBERON:0000203;2.26e-36;25!UBERON:0000073;1.41e-33;53!UBERON:0002616;1.41e-33;53!UBERON:0002619;4.37e-33;22!UBERON:0001950;3.76e-30;20!UBERON:0001017;1.74e-26;75!UBERON:0000955;4.45e-25;68!UBERON:0001016;1.85e-23;83!UBERON:0002420;3.91e-13;9!UBERON:0007245;3.91e-13;9!UBERON:0010009;3.91e-13;9!UBERON:0010011;3.91e-13;9!UBERON:0000454;3.91e-13;9!UBERON:0000125;4.11e-12;9!UBERON:0002308;4.11e-12;9!UBERON:0007023;2.63e-11;114!UBERON:0001871;3.41e-11;6!UBERON:0011216;1.01e-10;132!UBERON:0001894;3.72e-10;7!UBERON:0009663;3.75e-10;7!UBERON:0000200;8.06e-10;6!UBERON:0000349;5.08e-09;5!UBERON:0001872;2.54e-08;5!UBERON:0002021;3.51e-08;5!UBERON:0002298;1.24e-07;6!UBERON:0000369;2.96e-07;4!UBERON:0002435;2.96e-07;4!UBERON:0000204;2.96e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.39e-68,81;UBERON:0001016,2.68e-67,89;UBERON:0001049,3.32e-62,56;UBERON:0005068,3.32e-62,56;UBERON:0006241,3.32e-62,56;UBERON:0007135,3.32e-62,56;UBERON:0000073,4.58e-59,53;UBERON:0002616,4.58e-59,53;UBERON:0002780,1.18e-56,41;UBERON:0001890,1.18e-56,41;UBERON:0003080,1.18e-56,41;UBERON:0006240,1.18e-56,41;UBERON:0000955,1.24e-56,68;UBERON:0006238,1.24e-56,68;UBERON:0001893,1.24e-47,34;UBERON:0003528,4.11e-47,34;UBERON:0002020,4.11e-47,34;UBERON:0001869,6.10e-46,32;UBERON:0002791,4.94e-45,32;UBERON:0003075,3.13e-43,82;UBERON:0007284,3.13e-43,82;UBERON:0002346,2.53e-40,86;UBERON:0003056,1.15e-38,61;UBERON:0007023,2.30e-38,114;UBERON:0000956,2.07e-36,25;UBERON:0000203,2.07e-36,25;UBERON:0004121,3.79e-35,171;UBERON:0000924,3.79e-35,171;UBERON:0006601,3.79e-35,171;UBERON:0011216,2.57e-33,223;UBERON:0002619,4.06e-33,22;UBERON:0010371,1.49e-32,104;UBERON:0001950,3.53e-30,20;UBERON:0010314,4.45e-30,132;UBERON:0002420,5.75e-13,9;UBERON:0007245,5.75e-13,9;UBERON:0010009,5.75e-13,9;UBERON:0010011,5.75e-13,9;UBERON:0000454,5.75e-13,9;UBERON:0000125,5.48e-12,9;UBERON:0002308,5.48e-12,9;UBERON:0001871,3.36e-11,6;UBERON:0000025,8.47e-11,192;UBERON:0001894,3.39e-10,7;UBERON:0006222,3.39e-10,7;UBERON:0009663,5.45e-10,7;UBERON:0000200,8.17e-10,6;UBERON:0004111,4.27e-09,240;UBERON:0000349,5.02e-09,5;UBERON:0003076,1.68e-08,15;UBERON:0003057,1.68e-08,15;UBERON:0001872,2.54e-08,5;UBERON:0002021,3.45e-08,5;UBERON:0002298,9.34e-08,6;UBERON:0000923,2.52e-07,560;UBERON:0010316,2.52e-07,560;UBERON:0005291,2.52e-07,560;UBERON:0006598,2.52e-07,560;UBERON:0010317,2.52e-07,560;UBERON:0002532,2.52e-07,560;UBERON:0000369,3.01e-07,4;UBERON:0002435,3.01e-07,4;UBERON:0000204,3.01e-07,4;UBERON:0010082,3.01e-07,4;UBERON:0002050,4.56e-07,564 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,1.56711376919903,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,9.15955158819382,4.51685602740518,3.51519390865448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0.361439152384566,4.01070328508712,0.289693037921647,0.795285947051099,0,0,0,0,4.71524671791765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,3.47880366186723,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47266929278557,0,0,0.168336113954066,0.375355559615893,0,1.75591048352335,1.22595118319608,5.10809400282429,0.113432183160021,1.79389635688862,3.20336083227851,2.11931901159562,0.900273288253207,0.515262646192195,4.12224864073007,8.18914167858995,0.506328996723799,0.389748020644795,0.757301322732344,1.74894807420369,0.323292113637624,2.13005755509969,2.21654616100809,4.23901480776219,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.825472625798197,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,2.535908257668,0.531876233169741,2.08014873822732,0,0,0.266422179016099,0,0,0,2.28015329005615,0,0,0,0,0.099972991182057,0,0,0,7.42837052023906,6.89171615004683,0,0,0,0.179060963239896,0,0,0,0,8.89331184778622,27.3293693101006,23.9719531961086,13.9038500227509,22.9657950595139,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,1.03473071292505,0.664225598535437,0.553107505625109,10.9473354229784,0.391602314925481,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.512556597022804,0,0.321707842287215,0,0,0.532685175939381,0,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,0,0,0.580024309752732,0,0.15350367472613,0.137836572484531,0,0.290033387828457,0.0852266274161009,1.60257664164127,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,1.89827654831236,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,6.41549583617533,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,1.64647446479951,0.379473173765715,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,9.61416640147258,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0.296964680832639,0,68.5961876958746,43.3261802544379,0.111308705022906,0,0,2.39097585901284,0.828851746593443,1.25966373927138,1.22722419002586,0,19.5954940226939,0,0,0,3.74844941420348,0,2.22273980289274,19.3866549219044,14.7501276077344,29.9420697001791,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0.291604613383254,1.38899995946634,20.3720518737183,22.5515340229513,0,2.21158519862449,4.72876190325676,24.5711644812449,0,0,1.84680620409113,0,0,0,0,0.31900115973192,3.38911095586891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0.123563938946503,0.208843899010911,4.31367251076333,4.01288823649394,10.7761645033656,0,0,0,0,3.62972148145992,26.9344030234831,3.72800819808079,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.57254001417827,0,0,0,0,1.35784623083787,0,5.64951851951331,0,0,37.2900588180126,0,0.160317640503067,0.640358984218058,0.599428828746391,0,1.14536596165916,0,0,0,0,0.135904206073614,0.104602846312333,0,0,12.6088260629056,3.28572909340783,0,0.429765441419957,0,0.837847203816763,0.687481272035051,0,0.199679000498991,0,0,0.873385142327441,0,0,0,0,0,0,0,82.7038877401675,22.7459688206331,0.643012593860077,0.412618309791701,1.24632101408756,0,0,46.5949099567049,0,0.0788057072991982,0.157363764404994,0,0,0,1.42939065274673,0,0,0.542999601753713,0,0.653174720218818,0,0.082092520749339,1.36310417428337,0,0,1.32506888912221,3.61992277812342,3.9669780522807,0,0,0.747511887973863,23.1090328496509,0.414239055347196,0.496166021811951,0,0,0,2.72008901684737,0.5013797880454,1.83807346058077,0.983617892129413,0.314108192500469,24.8099090390756,28.7981985168633,14.772529823367,4.0138643698305,1.99672292766334,4.22255540001407,86.1911995652718,0,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,1.50940741051545,7.11848977277229,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0,0.214821114084977,0,0,0,0.343395705182793,1.01024846629776,11.3566408405786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,12.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| ||
|short_description=p2@LPPR4 | |||
}} | }} |
Latest revision as of 02:01, 20 September 2015
Short description: | p2@LPPR4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPPR4_5end |
Coexpression cluster: | C2606_amygdala_hippocampus_pineal_medulloblastoma_insula_frontal_nucleus |
Association with transcript: | 0bp_to_AK291369, AK297417, BC042963_5end |
EntrezGene: | LPPR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data