FFCP PHASE1:Hg19::chr19:57352087..57352102,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:57352087..57352102,-
|short_description=p1@PEG3,p1@ZIM2
|description=CAGE_peak_1_at_PEG3_5end,CAGE_peak_1_at_ZIM2_5end
|association_with_transcript=0bp_to...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23619,5178 | |EntrezGene=23619,5178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12875,8826 | |HGNC=12875,8826 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZV7,C9JP50,Q9GZU2,B4DIM4,A7E2B8,Q96Q96 | |UniProt=Q9NZV7,C9JP50,Q9GZU2,B4DIM4,A7E2B8,Q96Q96 | ||
|association_with_transcript=0bp_to_ENST00000221722,ENST00000292074,ENST00000391708,ENST00000423103,ENST00000560101,NM_001146184,NM_001146185,NM_001146187,NM_001146326,NM_001146327,NM_006210,NM_015363,uc002qnq.2,uc002qnr.2,uc002qnv.2,uc002qnw.2,uc002qnx.2,uc010etp.2,uc010etr.2,uc010ygs.1_5end | |||
|cluster_id=chr19:57352087..57352102,- | |||
|coexpression_cluster_id=C1457 | |||
|description=CAGE_peak_1_at_PEG3_5end,CAGE_peak_1_at_ZIM2_5end | |||
|id=chr19:57352087..57352102,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.01e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.04e-26;32!UBERON:0003528;1.12e-26;34!UBERON:0002020;1.12e-26;34!UBERON:0001893;1.16e-26;34!UBERON:0002780;1.35e-26;41!UBERON:0001890;1.35e-26;41!UBERON:0002791;1.61e-26;32!UBERON:0000073;2.61e-25;53!UBERON:0002616;2.61e-25;53!UBERON:0000956;1.53e-22;25!UBERON:0000203;1.53e-22;25!UBERON:0002619;1.84e-21;22!UBERON:0001950;9.24e-20;20!UBERON:0001017;1.87e-18;75!UBERON:0000955;3.36e-18;68!UBERON:0001016;1.77e-16;83!UBERON:0007023;1.42e-15;114!UBERON:0000125;7.27e-10;9!UBERON:0002308;7.27e-10;9!UBERON:0002420;7.80e-10;9!UBERON:0007245;7.80e-10;9!UBERON:0010009;7.80e-10;9!UBERON:0010011;7.80e-10;9!UBERON:0000454;7.80e-10;9!UBERON:0004732;3.00e-09;13!UBERON:0004733;1.59e-08;12!UBERON:0002028;1.59e-08;12!UBERON:0000922;2.94e-08;49!UBERON:0011216;3.58e-08;132!UBERON:0009663;4.63e-08;7!UBERON:0001894;2.23e-07;7!UBERON:0001871;3.04e-07;6!UBERON:0000200;5.00e-07;6!UBERON:0002298;5.40e-07;6 | |||
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|phase1_expression=0.726713517082227,0.642301571672949,1.40954404095971,0,0,0,0,0,1.30592814099919,0.491467873003018,0.697801167972428,1.74753097704138,1.58260186937072,0.123766352960047,0.994192127183747,0,0,0,0,2.33930010345897,0.612002073732759,1.88072832886853,6.29719171688325,3.14811177667634,6.02604670055053,0,0.164201178899891,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,2.43806866313962,10.0605128955545,28.7690764147943,0,0,0,0,0,2.83604451492204,3.76939975686359,2.54720878510066,53.9633791050576,0,0,0,0.348259474598534,0,0.476981248610684,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,1.57170560838319,1.0135033243499,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,7.8494864019923,0,0,31.7435256107762,0.538842688278752,0.653847612453835,3.32986340818849,6.91411109375999,0.937285727335186,0,0,0,1.76151747965647,2.26622122115384,1.54495887372473,0.204154171254893,0.982674538494144,0.103325781175765,0,0.247266929278557,0,0,4.20840284885166,3.503318556415,0,0.877955241761676,0,0.751190294532984,1.24775401476023,0,0.427114777637135,0,0,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,1.2931684545505,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,2.8810180793198,0,1.26755034821831,0.982827216677626,32.4934448674772,0,0,0.514703430895577,0.329250856225877,0,0.402115889646523,0.740707561268237,1.3032332212413,0,2.88662684050547,2.31860809950154,2.81780866165972,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0.144119953416961,0.25248486685276,2.47641787739459,0,0,0,3.29047976650635,0,0,1.68196626518041,1.30788020649984,2.56684000373325,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,2.43062589218851,0,0,0.325736184293735,1.42156779497018,0,0.602878754119172,0.871533458600294,0.299918973546171,0,1.00451418286425,0,0.239624855491583,0,0,0.289562613335158,0,0.716243852959582,0,0,0,0,20.5816645620195,40.3433546958627,11.5993321916654,11.5586223080701,5.74144876487847,0,0,0,1.2269149171914,0,0.813795071099207,0,0.178428988797162,0.788512075169673,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0.979005787313703,0,0,0,0,9.09382714338778,0,4.5358543999452,0.248107807818777,0.61384789315225,0,0.384417447767103,0,0.321707842287215,0,0,0.710246901252508,0,0,0.697262270759755,0,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,1.61732207919271,0,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,3.84675187674584,0,0.325378394664303,109.120431334938,0,0,0,0,0,5.7035723792352,0.924291702687866,2.14905144616581,3.30807773962873,2.68550612170684,1.88521702088497,3.32383846922794,5.43095417445098,0.330569830721956,0.192190067365106,0.382838137483752,0.708104465988849,0,0,0,0,0,0,0,0.572499546967965,1.116475108079,0,0,0,0,0,0,6.47540847299933,1.92175920815238,2.82749765629647,0,0,0,2.43816869544795,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,106.570782479314,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,11.0028793261297,5.77487913158015,0,0,0,0.0711418433484141,0,6.38653988585013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71381899160387,15.7768678274367,0,0,26.2618933211459,40.3871965932389,20.5797670406485,165.028509529205,124.070425274072,0,0,0,10.5601433773067,8.56480138146558,0,0,0,0,0,0,0,11.935852082069,0,0,136.675917199426,174.960633133251,49.9034495002985,0,0,11.5999932069567,0,0,0,0,256.903664390647,0,255.093519114386,310.535829460425,86.9715897007375,100.18480949769,86.890999972343,231.012823203133,0,0,24.8549334967265,0,176.842514665642,123.775791641076,367.336764468309,86.7683154470821,27.5708756139606,254.790622936907,0,3.29658538429552,0,0,0,0,0,0,0,0,0,0,5.97157158647103,6.63431733775044,14.0536933334734,0,0,0,74.9500598745129,36.1159941284455,291.659234928047,0,0,0,10.2591944740842,16.9387002468129,31.5254944479405,6.63459086099124,0,0,0,0,0.313932918407225,0,3.69992409838731,0,0,0,0,13.4539534546363,0,0,0,0.0821154570532092,5.52837393983991,101.053265061768,30.7333807461524,0,0,237.098930854766,0,0,8.32466679483475,0,0,0,0,0,0,0,0,0,0,0,163.314318529063,74.8872422539202,2.55493176133945,0,0,8.37847203816763,7.79145441639724,2.15361907373044,3.39454300848285,7.72606886645828,8.25734392534928,23.1111145354338,0,511.417218425522,358.227129950946,364.442925761518,354.138219409887,0,0,139.960425406437,96.7044183392187,0,0,0,0.674921674654501,1.5476039091159,222.03962958508,0,4.57073102335349,26.961658301389,0,0,0,5.717562610986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| ||
|short_description=p1@PEG3,p1@ZIM2 | |||
}} | }} |
Latest revision as of 05:08, 20 September 2015
Short description: | p1@PEG3, p1@ZIM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PEG3_5end, CAGE_peak_1_at_ZIM2_5end |
Coexpression cluster: | C1457_neuroectodermal_putamen_ovary_hepatoblastoma_merkel_choriocarcinoma_hepatocellular |
Association with transcript: | 0bp_to_ENST00000221722, ENST00000292074, ENST00000391708, ENST00000423103, ENST00000560101, NM_001146184, NM_001146185, NM_001146187, NM_001146326, NM_001146327, NM_006210, NM_015363, uc002qnq.2, uc002qnr.2, uc002qnv.2, uc002qnw.2, uc002qnx.2, uc010etp.2, uc010etr.2, uc010ygs.1_5end |
EntrezGene: | 23619,5178 |
HGNC: | 8826&submit=Submit 12875, 8826 |
UniProt: | Q9NZV7C9JP50Q9GZU2B4DIM4A7E2B8Q96Q96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data