FFCP PHASE1:Hg19::chr9:116263639..116263656,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466314_5end | |||
|cluster_id=chr9:116263639..116263656,+ | |||
|description=CAGE_peak_27_at_RGS3_5end | |||
|id=chr9:116263639..116263656,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.54e-19!24;CL:0000115!1.02e-13!35;CL:0005020!1.15e-11!6;CL:0002138!1.15e-11!6;CL:0005022!1.15e-11!6;CL:0000071!6.40e-11!18;CL:0002546!6.40e-11!18;CL:0002078!6.26e-10!44;CL:1000413!5.90e-08!9;CL:0002605!2.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.54e-25;2!CL:0002605;8.53e-17;3!CL:0000128;1.02e-07;7!CL:0000126;1.02e-07;7!CL:0000127;1.02e-07;7!CL:0002319;2.81e-07;25!CL:0002545;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.90e-17,3;CL:0000128,9.88e-08,7;CL:0000126,9.88e-08,7;CL:0000127,9.88e-08,7;CL:0002453,9.88e-08,7;CL:0002319,2.93e-07,25;CL:0002545,3.09e-07,2;CL:0000047,7.88e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.06e-13;1!UBERON:0010226;5.06e-13;1!UBERON:0005425;5.06e-13;1!UBERON:0010122;2.35e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.07e-43!57;UBERON:0005068!8.07e-43!57;UBERON:0006241!8.07e-43!57;UBERON:0007135!8.07e-43!57;UBERON:0001017!8.79e-41!82;UBERON:0001893!2.80e-40!34;UBERON:0005743!3.21e-40!86;UBERON:0002020!2.00e-39!34;UBERON:0003528!2.00e-39!34;UBERON:0002616!1.09e-38!59;UBERON:0002791!2.13e-38!33;UBERON:0002780!1.93e-37!41;UBERON:0001890!1.93e-37!41;UBERON:0006240!1.93e-37!41;UBERON:0000073!4.28e-37!94;UBERON:0001016!4.28e-37!94;UBERON:0001869!5.13e-37!32;UBERON:0003080!2.42e-36!42;UBERON:0007023!3.35e-35!115;UBERON:0003075!4.80e-34!86;UBERON:0007284!4.80e-34!86;UBERON:0000955!7.17e-33!69;UBERON:0006238!7.17e-33!69;UBERON:0002346!5.99e-32!90;UBERON:0000956!1.47e-30!25;UBERON:0000203!1.47e-30!25;UBERON:0003056!2.55e-27!61;UBERON:0002619!4.20e-25!22;UBERON:0004111!4.10e-22!241;UBERON:0001950!1.58e-21!20;UBERON:0000477!2.57e-21!286;UBERON:0000025!8.92e-21!194;UBERON:0000033!5.98e-20!123;UBERON:0000153!1.94e-19!129;UBERON:0007811!1.94e-19!129;UBERON:0004121!3.51e-19!169;UBERON:0000924!2.10e-18!173;UBERON:0006601!2.10e-18!173;UBERON:0000483!7.03e-13!309;UBERON:0000119!1.37e-12!312;UBERON:0001872!4.80e-11!5;UBERON:0000064!5.65e-11!219;UBERON:0001986!6.40e-11!18;UBERON:0004638!6.40e-11!18;UBERON:0004852!6.40e-11!18;UBERON:0002308!3.21e-10!9;UBERON:0000125!3.21e-10!9;UBERON:0004732!8.52e-10!13;UBERON:0000467!3.78e-09!625;UBERON:0000480!4.27e-09!626;UBERON:0001473!1.56e-08!8;UBERON:0004536!1.56e-08!8;UBERON:0006558!1.56e-08!8;UBERON:0000487!1.79e-08!22;UBERON:0000468!1.86e-08!659;UBERON:0004733!3.39e-08!12;UBERON:0002028!3.39e-08!12;UBERON:0007277!3.39e-08!12;UBERON:0003076!5.09e-08!15;UBERON:0003057!5.09e-08!15;UBERON:0003915!5.90e-08!9;UBERON:0004700!5.90e-08!9;UBERON:0001917!5.90e-08!9;UBERON:0002420!7.69e-08!9;UBERON:0007245!7.69e-08!9;UBERON:0010009!7.69e-08!9;UBERON:0010011!7.69e-08!9;UBERON:0000454!7.69e-08!9;UBERON:0009663!1.30e-07!7;UBERON:0002298!2.47e-07!8;UBERON:0006914!3.63e-07!25;UBERON:0000349!5.56e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.89e-21;32!UBERON:0001893;1.31e-19;34!UBERON:0001869;2.68e-19;32!UBERON:0003528;2.72e-19;34!UBERON:0002020;2.72e-19;34!UBERON:0005383;8.53e-17;3!UBERON:0005382;8.53e-17;3!UBERON:0002780;1.21e-16;41!UBERON:0001890;1.21e-16;41!UBERON:0001870;1.61e-16;3!UBERON:0000956;6.86e-16;25!UBERON:0000203;6.86e-16;25!UBERON:0002084;5.06e-13;1!UBERON:0001874;5.06e-13;1!UBERON:0003112;5.06e-13;1!UBERON:0000941;5.06e-13;1!UBERON:0001785;5.06e-13;1!UBERON:0002464;5.06e-13;1!UBERON:0004904;5.06e-13;1!UBERON:0011158;5.06e-13;1!UBERON:0001021;5.06e-13;1!UBERON:0002082;5.06e-13;1!UBERON:0003128;5.06e-13;1!UBERON:0001703;5.06e-13;1!UBERON:0002241;5.06e-13;1!UBERON:0000369;7.69e-13;4!UBERON:0002435;7.69e-13;4!UBERON:0000204;7.69e-13;4!UBERON:0000073;9.47e-10;53!UBERON:0002616;9.47e-10;53!UBERON:0002619;2.30e-08;22!UBERON:0001016;5.89e-08;83!UBERON:0000955;8.68e-08;68!UBERON:0009663;1.02e-07;7!UBERON:0001873;2.35e-07;2!UBERON:0001954;3.81e-07;2!UBERON:0003714;3.81e-07;2!UBERON:0002702;3.81e-07;2!UBERON:0005162;3.81e-07;2!UBERON:0000122;3.81e-07;2!UBERON:0005800;3.81e-07;2!UBERON:0003022;3.81e-07;2!UBERON:0001515;3.81e-07;2!UBERON:0002421;3.81e-07;2!UBERON:0002600;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,5.36e-22,32;UBERON:0001869,5.36e-22,32;UBERON:0002780,1.12e-21,41;UBERON:0001890,1.12e-21,41;UBERON:0003080,1.12e-21,41;UBERON:0006240,1.12e-21,41;UBERON:0003528,1.07e-20,34;UBERON:0002020,1.07e-20,34;UBERON:0001893,1.07e-20,34;UBERON:0003056,9.79e-18,61;UBERON:0005383,5.30e-17,3;UBERON:0005382,5.30e-17,3;UBERON:0001016,7.52e-17,89;UBERON:0000073,1.23e-16,53;UBERON:0002616,1.23e-16,53;UBERON:0001870,1.27e-16,3;UBERON:0000956,6.69e-16,25;UBERON:0000203,6.69e-16,25;UBERON:0001017,9.25e-16,81;UBERON:0001049,1.05e-15,56;UBERON:0005068,1.05e-15,56;UBERON:0006241,1.05e-15,56;UBERON:0007135,1.05e-15,56;UBERON:0001874,2.32e-13,1;UBERON:0003112,3.76e-13,1;UBERON:0011158,3.76e-13,1;UBERON:0003128,3.76e-13,1;UBERON:0001703,3.76e-13,1;UBERON:0002241,3.76e-13,1;UBERON:0004761,3.76e-13,1;UBERON:0009617,3.76e-13,1;UBERON:0000941,5.38e-13,1;UBERON:0001785,5.38e-13,1;UBERON:0002464,5.38e-13,1;UBERON:0004904,5.38e-13,1;UBERON:0001021,5.38e-13,1;UBERON:0003902,5.38e-13,1;UBERON:0005425,5.38e-13,1;UBERON:0000369,5.39e-13,4;UBERON:0002435,5.39e-13,4;UBERON:0000204,5.39e-13,4;UBERON:0010082,5.39e-13,4;UBERON:0003075,6.22e-13,82;UBERON:0007284,6.22e-13,82;UBERON:0002084,6.82e-13,1;UBERON:0002082,6.82e-13,1;UBERON:0010226,6.82e-13,1;UBERON:0000955,1.36e-12,68;UBERON:0006238,1.36e-12,68;UBERON:0002346,2.80e-12,86;UBERON:0010314,3.93e-11,132;UBERON:0010371,5.94e-10,104;UBERON:0000025,1.67e-08,192;UBERON:0002619,2.30e-08,22;UBERON:0004121,3.91e-08,171;UBERON:0000924,3.91e-08,171;UBERON:0006601,3.91e-08,171;UBERON:0009663,8.35e-08,7;UBERON:0001873,2.43e-07,2;UBERON:0010122,2.43e-07,2;UBERON:0002702,2.91e-07,2;UBERON:0007023,2.97e-07,114;UBERON:0005800,3.09e-07,2;UBERON:0001515,3.09e-07,2;UBERON:0005253,3.28e-07,2;UBERON:0001954,3.48e-07,2;UBERON:0003022,3.48e-07,2;UBERON:0002421,3.48e-07,2;UBERON:0002600,3.48e-07,2;UBERON:0003714,3.93e-07,2;UBERON:0005162,3.93e-07,2;UBERON:0000122,3.93e-07,2;UBERON:0011216,5.28e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,2.86235987131057,0.410623275218653,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.838998872419812,1.10047216776027,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0.367663080345869,1.62028389576352,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,2.17073589525734,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0.802577647298789,1.63985112007737,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,1.39283751102933,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0.89268582976749,0.806201669840715,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0.321506296930038,0,0,0,0,0.607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,1.6274820991845,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.638535436228605,0.205116364240755,0.252071696221718,0.622415272177961,1.61475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0.781078098613847,0.826747186004736,1.20490039368423,0.546974809018219,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.920818829879887,0,0,0.078493092850514,1.88538707899202,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.611923411718232,0.872701380680755,0,0,0,0,0,0.218531143927391,0,0,0.534434810531121,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p27@RGS3 | |||
}} |
Latest revision as of 07:04, 20 September 2015
Short description: | p27@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466314_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.90e-17 | 3 |
oligodendrocyte | 9.88e-08 | 7 |
macroglial cell | 9.88e-08 | 7 |
astrocyte | 9.88e-08 | 7 |
oligodendrocyte precursor cell | 9.88e-08 | 7 |
neural cell | 2.93e-07 | 25 |
thoracic aorta endothelial cell | 3.09e-07 | 2 |
neuronal stem cell | 7.88e-07 | 8 |