FFCP PHASE1:Hg19::chr11:105480854..105480865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:105480854..105480865,+ to FFCP PHASE1:Hg19::chr11:105480854..105480865,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2893 | |EntrezGene=2893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4574 | |HGNC=4574 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQN1 | |UniProt=E9PQN1 | ||
|association_with_transcript=6bp_to_ENST00000527669_5end | |||
|cluster_id=chr11:105480854..105480865,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_GRIA4_5end | |||
|id=chr11:105480854..105480865,+ | |||
|ontology_enrichment_celltype=CL:0000064!9.38e-07!3;CL:0005012!9.38e-07!3;CL:0000067!9.38e-07!3;CL:0002304!9.38e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.63e-18;82!UBERON:0006215;2.25e-16;3!UBERON:0006241;1.26e-07;3!UBERON:0003057;1.26e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-82!57;UBERON:0005068!1.29e-82!57;UBERON:0006241!1.29e-82!57;UBERON:0007135!1.29e-82!57;UBERON:0003075!8.86e-73!86;UBERON:0007284!8.86e-73!86;UBERON:0000073!1.49e-72!94;UBERON:0001016!1.49e-72!94;UBERON:0001017!1.61e-71!82;UBERON:0002346!1.66e-71!90;UBERON:0005743!3.06e-70!86;UBERON:0002616!1.34e-68!59;UBERON:0000955!1.08e-61!69;UBERON:0006238!1.08e-61!69;UBERON:0002780!1.18e-59!41;UBERON:0001890!1.18e-59!41;UBERON:0006240!1.18e-59!41;UBERON:0003080!5.23e-58!42;UBERON:0001893!3.20e-57!34;UBERON:0002020!4.68e-57!34;UBERON:0003528!4.68e-57!34;UBERON:0002791!5.86e-55!33;UBERON:0003056!3.33e-54!61;UBERON:0001869!2.95e-53!32;UBERON:0002619!5.82e-46!22;UBERON:0000924!1.69e-45!173;UBERON:0006601!1.69e-45!173;UBERON:0004121!2.40e-45!169;UBERON:0007023!4.07e-45!115;UBERON:0000033!1.70e-43!123;UBERON:0000956!2.57e-43!25;UBERON:0000203!2.57e-43!25;UBERON:0000153!1.87e-42!129;UBERON:0007811!1.87e-42!129;UBERON:0001950!4.15e-42!20;UBERON:0003076!1.27e-24!15;UBERON:0003057!1.27e-24!15;UBERON:0004732!1.86e-20!13;UBERON:0000025!3.39e-19!194;UBERON:0004733!1.75e-18!12;UBERON:0002028!1.75e-18!12;UBERON:0007277!1.75e-18!12;UBERON:0000064!1.21e-16!219;UBERON:0002420!5.86e-15!9;UBERON:0007245!5.86e-15!9;UBERON:0010009!5.86e-15!9;UBERON:0010011!5.86e-15!9;UBERON:0000454!5.86e-15!9;UBERON:0002308!6.96e-15!9;UBERON:0000125!6.96e-15!9;UBERON:0000477!1.86e-14!286;UBERON:0000200!2.05e-14!6;UBERON:0000483!2.24e-14!309;UBERON:0001871!3.93e-14!7;UBERON:0000119!4.42e-14!312;UBERON:0002298!7.36e-14!8;UBERON:0004111!1.95e-13!241;UBERON:0002021!1.36e-12!5;UBERON:0002680!1.52e-12!9;UBERON:0001895!1.52e-12!9;UBERON:0010092!1.52e-12!9;UBERON:0001872!3.75e-12!5;UBERON:0000475!4.02e-12!365;UBERON:0000349!9.72e-12!5;UBERON:0009663!6.47e-11!7;UBERON:0000062!1.56e-08!511;UBERON:0000488!2.41e-08!4;UBERON:0000922!2.78e-08!612;UBERON:0000481!2.83e-08!347;UBERON:0000988!4.86e-08!3;UBERON:0002240!5.85e-08!3;UBERON:0001896!7.36e-08!3;UBERON:0005290!7.36e-08!3;UBERON:0010096!7.36e-08!3;UBERON:0000468!8.74e-08!659;UBERON:0002771!1.01e-07!3;UBERON:0005174!1.45e-07!5;UBERON:0001137!1.45e-07!5;UBERON:0006331!1.45e-07!3;UBERON:0001778!9.38e-07!3;UBERON:0001775!9.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.80e-72;22!UBERON:0001950;4.17e-71;20!UBERON:0000956;4.34e-63;25!UBERON:0000203;4.34e-63;25!UBERON:0001893;9.46e-55;34!UBERON:0001869;8.47e-54;32!UBERON:0003528;3.51e-49;34!UBERON:0002020;3.51e-49;34!UBERON:0000073;2.57e-48;53!UBERON:0002616;2.57e-48;53!UBERON:0002791;5.06e-48;32!UBERON:0002780;5.61e-43;41!UBERON:0001890;5.61e-43;41!UBERON:0001017;1.45e-36;75!UBERON:0000955;8.02e-34;68!UBERON:0001016;3.81e-30;83!UBERON:0004732;3.81e-29;13!UBERON:0000200;2.97e-28;6!UBERON:0004733;2.65e-25;12!UBERON:0002028;2.65e-25;12!UBERON:0001872;4.76e-24;5!UBERON:0002298;5.83e-20;6!UBERON:0001871;4.41e-17;6!UBERON:0002021;1.84e-16;5!UBERON:0001870;2.62e-15;3!UBERON:0001896;1.01e-14;3!UBERON:0005290;1.01e-14;3!UBERON:0002680;3.96e-14;9!UBERON:0001895;3.96e-14;9!UBERON:0007023;4.39e-13;114!UBERON:0011216;6.13e-11;132!UBERON:0002702;9.39e-11;2!UBERON:0002771;3.61e-10;2!UBERON:0005162;3.61e-10;2!UBERON:0000122;3.61e-10;2!UBERON:0000349;3.15e-09;5!UBERON:0002037;2.11e-08;6!UBERON:0010314;4.46e-08;132!UBERON:0000988;1.26e-07;3!UBERON:0002240;1.26e-07;3!UBERON:0005174;1.26e-07;3!UBERON:0001137;1.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.35e-91,56;UBERON:0005068,1.35e-91,56;UBERON:0006241,1.35e-91,56;UBERON:0007135,1.35e-91,56;UBERON:0000073,2.86e-85,53;UBERON:0002616,2.86e-85,53;UBERON:0001017,3.26e-77,81;UBERON:0000955,5.26e-73,68;UBERON:0006238,5.26e-73,68;UBERON:0001016,7.65e-73,89;UBERON:0002619,1.28e-71,22;UBERON:0001950,8.42e-71,20;UBERON:0003075,1.55e-64,82;UBERON:0007284,1.55e-64,82;UBERON:0000956,7.60e-63,25;UBERON:0000203,7.60e-63,25;UBERON:0001893,8.53e-62,34;UBERON:0002346,3.06e-61,86;UBERON:0002780,1.46e-60,41;UBERON:0001890,1.46e-60,41;UBERON:0003080,1.46e-60,41;UBERON:0006240,1.46e-60,41;UBERON:0001869,6.45e-60,32;UBERON:0003528,3.66e-56,34;UBERON:0002020,3.66e-56,34;UBERON:0002791,5.11e-54,32;UBERON:0010371,1.63e-49,104;UBERON:0003056,9.34e-43,61;UBERON:0007023,3.82e-42,114;UBERON:0010314,5.41e-40,132;UBERON:0004121,5.32e-35,171;UBERON:0000924,5.32e-35,171;UBERON:0006601,5.32e-35,171;UBERON:0003076,3.07e-31,15;UBERON:0003057,3.07e-31,15;UBERON:0004732,3.89e-29,13;UBERON:0011216,2.59e-28,223;UBERON:0000200,2.59e-28,6;UBERON:0004733,2.70e-25,12;UBERON:0002028,2.70e-25,12;UBERON:0007277,2.70e-25,12;UBERON:0001872,1.37e-23,5;UBERON:0000025,4.91e-22,192;UBERON:0002298,5.85e-20,6;UBERON:0001871,3.15e-17,6;UBERON:0002021,1.89e-16,5;UBERON:0004111,3.29e-16,240;UBERON:0001870,2.63e-15,3;UBERON:0001896,1.17e-14,3;UBERON:0005290,1.17e-14,3;UBERON:0010096,1.17e-14,3;UBERON:0002680,3.71e-14,9;UBERON:0001895,3.71e-14,9;UBERON:0010092,3.71e-14,9;UBERON:0000483,3.98e-12,306;UBERON:0000119,6.15e-12,309;UBERON:0002702,1.20e-10,2;UBERON:0002771,3.14e-10,2;UBERON:0005162,3.29e-10,2;UBERON:0000122,3.29e-10,2;UBERON:0000349,2.98e-09,5;UBERON:0002037,2.14e-08,6;UBERON:0006215,2.14e-08,6;UBERON:0000988,1.15e-07,3;UBERON:0002240,1.39e-07,3;UBERON:0005174,1.39e-07,3;UBERON:0001137,1.39e-07,3 | |||
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| ||
|short_description=p5@GRIA4 | |||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p5@GRIA4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRIA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 6bp_to_ENST00000527669_5end |
EntrezGene: | GRIA4 |
HGNC: | 4574 |
UniProt: | E9PQN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data