FFCP PHASE1:Hg19::chr1:21606013..21606059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1889 | |EntrezGene=1889 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |HGNC=3146 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000357071_5end | |association_with_transcript=0bp_to_ENST00000357071_5end | ||
|cluster_id=chr1:21606013..21606059,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_ECE1_5end | |description=CAGE_peak_5_at_ECE1_5end | ||
|id=chr1:21606013..21606059,- | |id=chr1:21606013..21606059,- | ||
|ontology_enrichment_celltype=CL:0002139!5.36e-21!24;CL:0000115!2.58e-20!35;CL:0000071!2.25e-16!18;CL:0002546!2.25e-16!18;CL:0002078!3.77e-15!44;CL:0000222!3.71e-14!119;CL:1000413!3.77e-09!9;CL:0000183!4.30e-08!59;CL:0000359!7.16e-08!32;CL:0000213!9.11e-08!57;CL:0000215!9.11e-08!57;CL:0000192!7.36e-07!42;CL:0000514!7.36e-07!42;CL:0000680!8.33e-07!57;CL:0000056!8.33e-07!57;CL:0000355!8.33e-07!57 | |ontology_enrichment_celltype=CL:0002139!5.36e-21!24;CL:0000115!2.58e-20!35;CL:0000071!2.25e-16!18;CL:0002546!2.25e-16!18;CL:0002078!3.77e-15!44;CL:0000222!3.71e-14!119;CL:1000413!3.77e-09!9;CL:0000183!4.30e-08!59;CL:0000359!7.16e-08!32;CL:0000213!9.11e-08!57;CL:0000215!9.11e-08!57;CL:0000192!7.36e-07!42;CL:0000514!7.36e-07!42;CL:0000680!8.33e-07!57;CL:0000056!8.33e-07!57;CL:0000355!8.33e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.21e-26;24!CL:0000115;6.48e-22;36!CL:0000071;2.94e-20;18!CL:0002078;5.45e-13;45!CL:1000413;3.88e-11;9!CL:0000213;3.46e-08;58!CL:0000215;3.46e-08;58!CL:0002544;5.24e-08;6!CL:0002543;8.96e-08;6!CL:0000359;1.81e-07;32!CL:0002138;2.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.31e-26,24;CL:0000115,5.11e-26,36;CL:0000071,2.98e-20,18;CL:0002546,2.98e-20,18;CL:0002078,1.22e-19,45;CL:0000222,2.16e-14,121;CL:0000213,3.67e-12,58;CL:0000215,3.67e-12,58;CL:1000413,3.90e-11,9;CL:0002544,5.28e-08,6;CL:0002543,8.97e-08,6;CL:0000359,1.78e-07,32;CL:0005020,2.18e-07,6;CL:0002138,2.18e-07,6;CL:0005022,2.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.94e-20;18!CL:0005022;2.16e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!9.53e-41!286;UBERON:0004111!2.46e-38!241;UBERON:0002049!4.45e-34!79;UBERON:0007798!4.45e-34!79;UBERON:0000025!6.47e-34!194;UBERON:0007023!5.84e-31!115;UBERON:0001009!1.39e-29!113;UBERON:0000055!1.47e-29!69;UBERON:0000119!6.56e-29!312;UBERON:0004872!1.17e-28!84;UBERON:0004535!5.73e-28!110;UBERON:0000483!3.04e-27!309;UBERON:0001981!2.99e-25!60;UBERON:0007500!2.99e-25!60;UBERON:0004537!2.99e-25!60;UBERON:0006965!2.99e-25!60;UBERON:0003914!1.86e-22!118;UBERON:0000467!7.78e-20!625;UBERON:0000480!1.20e-19!626;UBERON:0000468!1.27e-18!659;UBERON:0000481!3.24e-18!347;UBERON:0002616!1.70e-16!59;UBERON:0001986!2.25e-16!18;UBERON:0004638!2.25e-16!18;UBERON:0004852!2.25e-16!18;UBERON:0001637!4.41e-16!42;UBERON:0003509!4.41e-16!42;UBERON:0004572!4.41e-16!42;UBERON:0003075!8.34e-16!86;UBERON:0007284!8.34e-16!86;UBERON:0001049!5.96e-15!57;UBERON:0005068!5.96e-15!57;UBERON:0006241!5.96e-15!57;UBERON:0007135!5.96e-15!57;UBERON:0000475!1.52e-14!365;UBERON:0000487!3.38e-14!22;UBERON:0002346!4.26e-14!90;UBERON:0005743!1.15e-13!86;UBERON:0001017!2.22e-13!82;UBERON:0000490!2.39e-13!138;UBERON:0000922!4.59e-13!612;UBERON:0000955!1.23e-12!69;UBERON:0006238!1.23e-12!69;UBERON:0002050!1.41e-12!605;UBERON:0005423!1.41e-12!605;UBERON:0000923!3.12e-12!604;UBERON:0005291!3.12e-12!604;UBERON:0006598!3.12e-12!604;UBERON:0002532!3.12e-12!604;UBERON:0004573!7.94e-12!33;UBERON:0004571!7.94e-12!33;UBERON:0000153!9.38e-12!129;UBERON:0007811!9.38e-12!129;UBERON:0000073!1.32e-11!94;UBERON:0001016!1.32e-11!94;UBERON:0006914!2.56e-11!25;UBERON:0003080!2.75e-11!42;UBERON:0000033!3.13e-11!123;UBERON:0002780!4.71e-11!41;UBERON:0001890!4.71e-11!41;UBERON:0006240!4.71e-11!41;UBERON:0007100!1.38e-10!27;UBERON:0003056!1.46e-10!61;UBERON:0004121!2.04e-09!169;UBERON:0003103!2.29e-09!69;UBERON:0001893!2.52e-09!34;UBERON:0002020!3.36e-09!34;UBERON:0003528!3.36e-09!34;UBERON:0003915!3.77e-09!9;UBERON:0004700!3.77e-09!9;UBERON:0001917!3.77e-09!9;UBERON:0000948!4.71e-09!24;UBERON:0005498!4.71e-09!24;UBERON:0004140!4.71e-09!24;UBERON:0009881!4.71e-09!24;UBERON:0004141!4.71e-09!24;UBERON:0003084!4.71e-09!24;UBERON:0007005!4.71e-09!24;UBERON:0004139!4.71e-09!24;UBERON:0004291!4.71e-09!24;UBERON:0002791!5.56e-09!33;UBERON:0002385!7.49e-09!63;UBERON:0001015!7.49e-09!63;UBERON:0000383!7.49e-09!63;UBERON:0001869!1.10e-08!32;UBERON:0005256!1.24e-08!143;UBERON:0000924!1.29e-08!173;UBERON:0006601!1.29e-08!173;UBERON:0004290!2.32e-08!70;UBERON:0001134!2.58e-08!61;UBERON:0002036!2.58e-08!61;UBERON:0003082!2.58e-08!61;UBERON:0000914!2.93e-08!83;UBERON:0002329!2.93e-08!83;UBERON:0003077!2.93e-08!83;UBERON:0003059!2.93e-08!83;UBERON:0007282!2.93e-08!83;UBERON:0009618!2.93e-08!83;UBERON:0007285!2.93e-08!83;UBERON:0000947!6.79e-08!21;UBERON:0010191!6.79e-08!21;UBERON:0000064!7.57e-08!219;UBERON:0000062!1.66e-07!511;UBERON:0002465!1.78e-07!10 | |||
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| ||
|short_description=p5@ECE1 | |short_description=p5@ECE1 | ||
}} | }} |
Latest revision as of 02:47, 25 September 2015
Short description: | p5@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ECE1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000357071_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.31e-26 | 24 |
endothelial cell | 5.11e-26 | 36 |
blood vessel endothelial cell | 2.98e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-20 | 18 |
meso-epithelial cell | 1.22e-19 | 45 |
mesodermal cell | 2.16e-14 | 121 |
lining cell | 3.67e-12 | 58 |
barrier cell | 3.67e-12 | 58 |
endothelial cell of artery | 3.90e-11 | 9 |
aortic endothelial cell | 5.28e-08 | 6 |
vein endothelial cell | 8.97e-08 | 6 |
vascular associated smooth muscle cell | 1.78e-07 | 32 |
lymphangioblast | 2.18e-07 | 6 |
endothelial cell of lymphatic vessel | 2.18e-07 | 6 |
vascular lymphangioblast | 2.18e-07 | 6 |