FFCP PHASE1:Hg19::chr11:111685389..111685410,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:111685389..111685410,- to FFCP PHASE1:Hg19::chr11:111685389..111685410,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79796 | |EntrezGene=79796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15672 | |HGNC=15672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000527212_5end | |||
|cluster_id=chr11:111685389..111685410,- | |||
|coexpression_cluster_id=C2094 | |||
|description=CAGE_peak_7_at_ALG9_5end | |||
|id=chr11:111685389..111685410,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002590;8.54e-12;3!CL:0002549;4.24e-09;2!CL:0002195;1.46e-08;2!CL:0002571;1.46e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.31e-11,3;CL:0002549,4.78e-09,2;CL:0002195,1.55e-08,2;CL:0002571,1.55e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.97e-11;3!UBERON:0003057;5.97e-11;3!UBERON:0008947;4.00e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-37!115;UBERON:0002616!5.10e-28!59;UBERON:0001049!1.67e-25!57;UBERON:0005068!1.67e-25!57;UBERON:0006241!1.67e-25!57;UBERON:0007135!1.67e-25!57;UBERON:0002346!1.36e-23!90;UBERON:0001017!2.12e-23!82;UBERON:0000955!9.02e-23!69;UBERON:0006238!9.02e-23!69;UBERON:0005743!1.18e-22!86;UBERON:0003075!1.91e-22!86;UBERON:0007284!1.91e-22!86;UBERON:0000073!3.35e-21!94;UBERON:0001016!3.35e-21!94;UBERON:0002780!3.92e-20!41;UBERON:0001890!3.92e-20!41;UBERON:0006240!3.92e-20!41;UBERON:0003080!1.95e-19!42;UBERON:0000924!1.12e-17!173;UBERON:0006601!1.12e-17!173;UBERON:0000033!2.13e-17!123;UBERON:0000153!1.09e-16!129;UBERON:0007811!1.09e-16!129;UBERON:0004121!1.17e-16!169;UBERON:0000477!8.07e-16!286;UBERON:0002020!2.51e-15!34;UBERON:0003528!2.51e-15!34;UBERON:0000481!3.90e-15!347;UBERON:0003056!6.41e-15!61;UBERON:0001737!5.13e-14!9;UBERON:0001893!1.62e-13!34;UBERON:0001869!3.74e-13!32;UBERON:0002791!7.43e-13!33;UBERON:0002619!4.06e-12!22;UBERON:0001950!7.34e-12!20;UBERON:0000956!3.68e-10!25;UBERON:0000203!3.68e-10!25;UBERON:0000064!9.69e-10!219;UBERON:0001894!2.42e-09!7;UBERON:0006222!2.42e-09!7;UBERON:0000062!3.22e-09!511;UBERON:0005284!2.26e-08!5;UBERON:0000475!3.80e-08!365;UBERON:0004111!5.42e-08!241;UBERON:0000119!6.59e-08!312;UBERON:0001871!8.97e-08!7;UBERON:0002050!9.71e-08!605;UBERON:0005423!9.71e-08!605;UBERON:0001557!1.09e-07!19;UBERON:0000922!1.09e-07!612;UBERON:0000468!1.74e-07!659;UBERON:0000923!2.13e-07!604;UBERON:0005291!2.13e-07!604;UBERON:0006598!2.13e-07!604;UBERON:0002532!2.13e-07!604;UBERON:0002298!2.35e-07!8;UBERON:0003076!2.97e-07!15;UBERON:0003057!2.97e-07!15;UBERON:0002420!5.34e-07!9;UBERON:0007245!5.34e-07!9;UBERON:0010009!5.34e-07!9;UBERON:0010011!5.34e-07!9;UBERON:0000454!5.34e-07!9;UBERON:0000483!5.85e-07!309;UBERON:0002308!6.55e-07!9;UBERON:0000125!6.55e-07!9;UBERON:0000025!7.07e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.49e-33;9!UBERON:0001557;2.49e-33;9!UBERON:0005284;3.71e-19;5!UBERON:0006876;6.88e-16;11!UBERON:0002240;5.97e-11;3!UBERON:0005174;5.97e-11;3!UBERON:0001137;5.97e-11;3!UBERON:0005629;4.24e-09;2!UBERON:0005358;4.24e-09;2!UBERON:0001886;4.24e-09;2!UBERON:0004086;4.24e-09;2!UBERON:0005282;4.24e-09;2!UBERON:0005281;4.24e-09;2!UBERON:0002784;2.51e-08;4!UBERON:0002771;7.43e-08;2!UBERON:0001905;7.43e-08;2!UBERON:0002757;7.43e-08;2!UBERON:0010134;7.43e-08;2!UBERON:0005408;7.43e-08;2!UBERON:0001899;7.43e-08;2!UBERON:0001017;8.44e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.34e-33,9;UBERON:0005284,6.40e-19,5;UBERON:0006876,8.68e-16,11;UBERON:0001017,3.09e-15,81;UBERON:0001557,7.36e-15,19;UBERON:0001016,1.27e-14,89;UBERON:0002346,2.92e-14,86;UBERON:0000955,9.54e-14,68;UBERON:0006238,9.54e-14,68;UBERON:0001049,1.24e-13,56;UBERON:0005068,1.24e-13,56;UBERON:0006241,1.24e-13,56;UBERON:0007135,1.24e-13,56;UBERON:0004121,1.92e-13,171;UBERON:0000924,1.92e-13,171;UBERON:0006601,1.92e-13,171;UBERON:0011216,4.23e-13,223;UBERON:0003075,5.75e-12,82;UBERON:0007284,5.75e-12,82;UBERON:0002240,4.93e-11,3;UBERON:0005174,4.93e-11,3;UBERON:0001137,4.93e-11,3;UBERON:0010371,1.25e-09,104;UBERON:0000073,1.47e-09,53;UBERON:0002616,1.47e-09,53;UBERON:0002780,1.76e-09,41;UBERON:0001890,1.76e-09,41;UBERON:0003080,1.76e-09,41;UBERON:0006240,1.76e-09,41;UBERON:0010314,2.38e-09,132;UBERON:0005629,4.78e-09,2;UBERON:0005358,4.78e-09,2;UBERON:0001886,4.78e-09,2;UBERON:0004086,4.78e-09,2;UBERON:0005282,4.78e-09,2;UBERON:0005281,4.78e-09,2;UBERON:0002784,1.19e-08,4;UBERON:0007023,2.02e-08,114;UBERON:0001905,3.76e-08,2;UBERON:0002757,3.76e-08,2;UBERON:0010134,3.76e-08,2;UBERON:0005408,3.76e-08,2;UBERON:0001899,3.76e-08,2;UBERON:0003528,4.47e-08,34;UBERON:0002020,4.47e-08,34;UBERON:0003056,5.48e-08,61;UBERON:0002771,1.26e-07,2;UBERON:0000923,2.97e-07,560;UBERON:0010316,2.97e-07,560;UBERON:0005291,2.97e-07,560;UBERON:0006598,2.97e-07,560;UBERON:0010317,2.97e-07,560;UBERON:0002532,2.97e-07,560;UBERON:0002050,4.02e-07,564;UBERON:0002791,5.30e-07,32 | |||
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|short_description=p7@ALG9 | |||
}} | }} |
Latest revision as of 03:07, 25 September 2015
Short description: | p7@ALG9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ALG9_5end |
Coexpression cluster: | C2094_Fibroblast_Mesenchymal_neuroectodermal_Hep2_smooth_Smooth_left |
Association with transcript: | 34bp_to_ENST00000527212_5end |
EntrezGene: | ALG9 |
HGNC: | 15672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.31e-11 | 3 |
fibroblast of choroid plexus | 4.78e-09 | 2 |
hepatic stem cell | 1.55e-08 | 2 |
hepatic mesenchymal stem cell | 1.55e-08 | 2 |