FFCP PHASE1:Hg19::chr9:130374537..130374562,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130374537..130374562,+ to FFCP PHASE1:Hg19::chr9:130374537..130374562,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6812 | |EntrezGene=6812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11444 | |HGNC=11444 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5Q4,B7Z3F4 | |UniProt=F5H5Q4,B7Z3F4 | ||
|association_with_transcript=0bp_to_ENST00000373302,ENST00000535154,ENST00000541198_5end | |||
|cluster_id=chr9:130374537..130374562,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_STXBP1_5end | |||
|id=chr9:130374537..130374562,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.00e-10!180;CL:0000192!2.00e-08!42;CL:0000514!2.00e-08!42;CL:0000183!8.65e-08!59;CL:0000359!1.38e-07!32;CL:0000393!4.46e-07!60;CL:0000211!4.46e-07!60;CL:0000187!4.48e-07!54;CL:0000680!7.27e-07!57;CL:0000056!7.27e-07!57;CL:0000355!7.27e-07!57;CL:0000325!7.95e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.66e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.62e-08,43;CL:0000514,1.62e-08,43;CL:0000359,1.36e-07,32;CL:0000393,3.52e-07,61;CL:0000211,3.52e-07,61;CL:0000187,3.55e-07,55;CL:0000680,5.75e-07,58;CL:0000056,5.75e-07,58;CL:0000355,5.75e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.58e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.43e-31!365;UBERON:0000119!1.66e-31!312;UBERON:0000483!3.83e-31!309;UBERON:0005743!2.43e-28!86;UBERON:0001017!2.83e-28!82;UBERON:0004121!4.49e-28!169;UBERON:0003075!5.89e-28!86;UBERON:0007284!5.89e-28!86;UBERON:0001049!6.19e-28!57;UBERON:0005068!6.19e-28!57;UBERON:0006241!6.19e-28!57;UBERON:0007135!6.19e-28!57;UBERON:0000073!7.12e-28!94;UBERON:0001016!7.12e-28!94;UBERON:0000924!8.59e-27!173;UBERON:0006601!8.59e-27!173;UBERON:0002616!2.98e-26!59;UBERON:0000955!6.36e-26!69;UBERON:0006238!6.36e-26!69;UBERON:0002346!7.31e-26!90;UBERON:0000025!8.56e-26!194;UBERON:0004111!1.77e-24!241;UBERON:0000033!3.32e-23!123;UBERON:0000477!4.04e-22!286;UBERON:0003080!8.27e-22!42;UBERON:0000153!1.53e-21!129;UBERON:0007811!1.53e-21!129;UBERON:0002780!1.74e-21!41;UBERON:0001890!1.74e-21!41;UBERON:0006240!1.74e-21!41;UBERON:0003056!1.41e-20!61;UBERON:0000481!2.99e-19!347;UBERON:0007023!6.60e-19!115;UBERON:0002020!1.97e-17!34;UBERON:0003528!1.97e-17!34;UBERON:0001893!2.08e-17!34;UBERON:0000468!6.89e-17!659;UBERON:0002791!9.61e-17!33;UBERON:0001869!1.04e-16!32;UBERON:0000467!1.38e-16!625;UBERON:0000480!2.18e-16!626;UBERON:0002619!6.02e-15!22;UBERON:0001950!1.01e-13!20;UBERON:0002050!4.68e-13!605;UBERON:0005423!4.68e-13!605;UBERON:0000922!5.92e-13!612;UBERON:0000923!6.47e-13!604;UBERON:0005291!6.47e-13!604;UBERON:0006598!6.47e-13!604;UBERON:0002532!6.47e-13!604;UBERON:0000956!8.89e-13!25;UBERON:0000203!8.89e-13!25;UBERON:0000064!9.15e-12!219;UBERON:0000062!1.61e-09!511;UBERON:0001981!2.12e-09!60;UBERON:0007500!2.12e-09!60;UBERON:0004537!2.12e-09!60;UBERON:0006965!2.12e-09!60;UBERON:0002049!3.79e-09!79;UBERON:0007798!3.79e-09!79;UBERON:0000055!7.98e-09!69;UBERON:0001637!3.69e-08!42;UBERON:0003509!3.69e-08!42;UBERON:0004572!3.69e-08!42;UBERON:0004872!6.25e-08!84;UBERON:0004573!1.14e-07!33;UBERON:0004571!1.14e-07!33;UBERON:0003076!2.58e-07!15;UBERON:0003057!2.58e-07!15;UBERON:0002100!4.30e-07!216;UBERON:0000914!4.81e-07!83;UBERON:0002329!4.81e-07!83;UBERON:0003077!4.81e-07!83;UBERON:0003059!4.81e-07!83;UBERON:0007282!4.81e-07!83;UBERON:0009618!4.81e-07!83;UBERON:0007285!4.81e-07!83;UBERON:0000486!9.71e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.15e-15;41!UBERON:0001890;1.15e-15;41!UBERON:0001893;4.84e-15;34!UBERON:0001869;4.92e-15;32!UBERON:0000073;5.36e-15;53!UBERON:0002616;5.36e-15;53!UBERON:0002619;5.71e-15;22!UBERON:0003528;5.88e-15;34!UBERON:0002020;5.88e-15;34!UBERON:0002791;1.17e-14;32!UBERON:0001950;9.57e-14;20!UBERON:0000956;8.32e-13;25!UBERON:0000203;8.32e-13;25!UBERON:0001017;3.24e-12;75!UBERON:0000955;6.77e-12;68!UBERON:0001016;1.41e-10;83!UBERON:0004573;5.40e-07;33!UBERON:0004571;5.40e-07;33!UBERON:0010314;6.84e-07;132 | |||
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| ||
|short_description=p1@STXBP1 | |||
}} | }} |
Latest revision as of 04:33, 25 September 2015
Short description: | p1@STXBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STXBP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373302, ENST00000535154, ENST00000541198_5end |
EntrezGene: | STXBP1 |
HGNC: | 11444 |
UniProt: | F5H5Q4B7Z3F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.62e-08 | 43 |
smooth muscle myoblast | 1.62e-08 | 43 |
vascular associated smooth muscle cell | 1.36e-07 | 32 |
electrically responsive cell | 3.52e-07 | 61 |
electrically active cell | 3.52e-07 | 61 |
muscle cell | 3.55e-07 | 55 |
muscle precursor cell | 5.75e-07 | 58 |
myoblast | 5.75e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.75e-07 | 58 |