FFCP PHASE1:Hg19::chr17:56609349..56609450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5414 | |EntrezGene=5414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9165 | |HGNC=9165 | ||
|TSSclassifier=strong | |||
|UniProt=O43236 | |UniProt=O43236 | ||
|association_with_transcript=0bp_to_ENST00000317256,ENST00000426861,NM_080415,NM_080416,uc002iwo.1,uc002iwp.1,uc010dcy.1_5end | |association_with_transcript=0bp_to_ENST00000317256,ENST00000426861,NM_080415,NM_080416,uc002iwo.1,uc002iwp.1,uc010dcy.1_5end | ||
|cluster_id=chr17:56609349..56609450,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SEPT4_5end | |description=CAGE_peak_1_at_SEPT4_5end | ||
|id=chr17:56609349..56609450,- | |id=chr17:56609349..56609450,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.56e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.33e-48!115;UBERON:0005743!5.50e-45!86;UBERON:0000073!1.01e-43!94;UBERON:0001016!1.01e-43!94;UBERON:0001017!1.35e-43!82;UBERON:0000955!3.46e-39!69;UBERON:0006238!3.46e-39!69;UBERON:0003075!2.41e-37!86;UBERON:0007284!2.41e-37!86;UBERON:0002616!1.56e-35!59;UBERON:0001049!1.95e-35!57;UBERON:0005068!1.95e-35!57;UBERON:0006241!1.95e-35!57;UBERON:0007135!1.95e-35!57;UBERON:0000033!4.60e-35!123;UBERON:0002346!2.32e-34!90;UBERON:0000153!2.61e-34!129;UBERON:0007811!2.61e-34!129;UBERON:0004121!2.05e-32!169;UBERON:0000924!9.60e-31!173;UBERON:0006601!9.60e-31!173;UBERON:0003056!1.02e-26!61;UBERON:0003080!1.67e-25!42;UBERON:0002780!5.82e-25!41;UBERON:0001890!5.82e-25!41;UBERON:0006240!5.82e-25!41;UBERON:0001893!2.49e-21!34;UBERON:0002020!2.53e-21!34;UBERON:0003528!2.53e-21!34;UBERON:0002791!1.12e-20!33;UBERON:0001869!6.52e-20!32;UBERON:0000475!1.39e-16!365;UBERON:0000481!1.15e-15!347;UBERON:0000956!1.83e-15!25;UBERON:0000203!1.83e-15!25;UBERON:0002619!1.76e-14!22;UBERON:0000468!2.30e-13!659;UBERON:0001950!2.78e-13!20;UBERON:0000922!4.41e-13!612;UBERON:0000483!3.11e-12!309;UBERON:0000119!7.73e-12!312;UBERON:0000467!1.26e-11!625;UBERON:0002050!1.52e-11!605;UBERON:0005423!1.52e-11!605;UBERON:0000062!2.02e-11!511;UBERON:0000480!2.19e-11!626;UBERON:0000923!2.86e-11!604;UBERON:0005291!2.86e-11!604;UBERON:0006598!2.86e-11!604;UBERON:0002532!2.86e-11!604;UBERON:0000025!5.37e-11!194;UBERON:0003076!6.09e-11!15;UBERON:0003057!6.09e-11!15;UBERON:0000477!6.03e-10!286;UBERON:0004111!7.90e-10!241;UBERON:0004732!8.25e-10!13;UBERON:0004733!4.18e-09!12;UBERON:0002028!4.18e-09!12;UBERON:0007277!4.18e-09!12;UBERON:0000064!2.20e-08!219;UBERON:0002308!2.38e-07!9;UBERON:0000125!2.38e-07!9;UBERON:0002680!3.35e-07!9;UBERON:0001895!3.35e-07!9;UBERON:0010092!3.35e-07!9;UBERON:0002420!3.67e-07!9;UBERON:0007245!3.67e-07!9;UBERON:0010009!3.67e-07!9;UBERON:0010011!3.67e-07!9;UBERON:0000454!3.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.72e-23;53!UBERON:0002616;1.72e-23;53!UBERON:0001893;3.04e-23;34!UBERON:0003528;4.19e-23;34!UBERON:0002020;4.19e-23;34!UBERON:0002791;5.98e-23;32!UBERON:0001869;6.73e-23;32!UBERON:0002780;8.15e-23;41!UBERON:0001890;8.15e-23;41!UBERON:0000955;3.82e-21;68!UBERON:0001017;6.55e-21;75!UBERON:0000956;1.82e-19;25!UBERON:0000203;1.82e-19;25!UBERON:0002619;3.39e-18;22!UBERON:0001016;6.42e-18;83!UBERON:0001950;1.19e-16;20!UBERON:0007023;4.94e-15;114!UBERON:0004732;3.47e-12;13!UBERON:0004733;2.80e-11;12!UBERON:0002028;2.80e-11;12!UBERON:0011216;3.48e-10;132!UBERON:0000125;5.06e-09;9!UBERON:0002308;5.06e-09;9!UBERON:0002680;7.87e-09;9!UBERON:0001895;7.87e-09;9!UBERON:0002420;8.82e-09;9!UBERON:0007245;8.82e-09;9!UBERON:0010009;8.82e-09;9!UBERON:0010011;8.82e-09;9!UBERON:0000454;8.82e-09;9!UBERON:0009663;2.61e-07;7!UBERON:0010314;4.81e-07;132 | |||
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| ||
|short_description=p1@SEPT4 | |short_description=p1@SEPT4 | ||
}} | }} |
Latest revision as of 11:56, 16 September 2015
Short description: | p1@SEPT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000317256, ENST00000426861, NM_080415, NM_080416, uc002iwo.1, uc002iwp.1, uc010dcy.1_5end |
EntrezGene: | SEPT4 |
HGNC: | 9165 |
UniProt: | O43236 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data