FFCP PHASE1:Hg19::chr11:925824..925976,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:925824..925976,+
|short_description=p1@AP2A2
|description=CAGE_peak_1_at_AP2A2_5end
|association_with_transcript=0bp_to_ENST00000332231,ENST00000417081,EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161 | |EntrezGene=161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=562 | |HGNC=562 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVC3,C9J1S3,O94973,E7ESQ4,E9PNC4,E9PJJ7,E9PR62 | |UniProt=E7EVC3,C9J1S3,O94973,E7ESQ4,E9PNC4,E9PJJ7,E9PR62 | ||
|association_with_transcript=0bp_to_ENST00000332231,ENST00000417081,ENST00000448757,ENST00000448903,ENST00000452310,ENST00000525796,ENST00000528195,ENST00000528815,ENST00000529125,ENST00000529858,ENST00000534328,uc001lss.2,uc001lst.1,uc009yco.1_5end | |||
|cluster_id=chr11:925824..925976,+ | |||
|description=CAGE_peak_1_at_AP2A2_5end | |||
|id=chr11:925824..925976,+ | |||
|ontology_enrichment_celltype=CL:0002078!7.98e-13!44;CL:0000115!1.86e-12!35;CL:0000222!5.09e-09!119;CL:1000449!3.92e-07!16;CL:0002139!4.94e-07!24;CL:0000071!8.25e-07!18;CL:0002546!8.25e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.02e-11;36!CL:0002078;4.61e-09;45!CL:0002139;4.77e-07;24!CL:1000449;5.19e-07;15!CL:0000071;7.99e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,2.60e-13,45;CL:0000115,5.84e-13,36;CL:0000222,1.65e-09,121;CL:0002139,4.94e-07,24;CL:1000449,5.29e-07,15;CL:0000071,8.25e-07,18;CL:0002546,8.25e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;7.99e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.15e-27!194;UBERON:0000119!1.25e-24!312;UBERON:0000483!2.25e-24!309;UBERON:0004111!7.11e-24!241;UBERON:0003075!4.32e-22!86;UBERON:0007284!4.32e-22!86;UBERON:0002346!1.03e-21!90;UBERON:0000477!1.34e-21!286;UBERON:0001049!1.36e-20!57;UBERON:0005068!1.36e-20!57;UBERON:0006241!1.36e-20!57;UBERON:0007135!1.36e-20!57;UBERON:0000073!8.02e-20!94;UBERON:0001016!8.02e-20!94;UBERON:0000475!3.59e-19!365;UBERON:0005743!3.78e-19!86;UBERON:0001017!6.57e-19!82;UBERON:0002616!1.40e-18!59;UBERON:0000955!4.38e-18!69;UBERON:0006238!4.38e-18!69;UBERON:0000467!1.35e-17!625;UBERON:0000481!1.93e-17!347;UBERON:0000480!2.11e-17!626;UBERON:0000468!2.36e-17!659;UBERON:0007023!1.46e-16!115;UBERON:0000924!1.54e-15!173;UBERON:0006601!1.54e-15!173;UBERON:0004121!1.64e-15!169;UBERON:0003056!1.97e-15!61;UBERON:0003080!1.07e-14!42;UBERON:0000064!1.59e-14!219;UBERON:0002050!2.08e-14!605;UBERON:0005423!2.08e-14!605;UBERON:0002780!3.60e-14!41;UBERON:0001890!3.60e-14!41;UBERON:0006240!3.60e-14!41;UBERON:0000923!5.23e-14!604;UBERON:0005291!5.23e-14!604;UBERON:0006598!5.23e-14!604;UBERON:0002532!5.23e-14!604;UBERON:0000922!9.17e-14!612;UBERON:0002619!1.05e-13!22;UBERON:0000033!1.10e-13!123;UBERON:0001869!2.22e-13!32;UBERON:0002020!4.28e-13!34;UBERON:0003528!4.28e-13!34;UBERON:0000153!4.94e-13!129;UBERON:0007811!4.94e-13!129;UBERON:0001893!6.57e-13!34;UBERON:0001950!7.19e-13!20;UBERON:0003914!1.29e-12!118;UBERON:0002791!2.17e-12!33;UBERON:0002049!4.60e-12!79;UBERON:0007798!4.60e-12!79;UBERON:0000055!1.43e-11!69;UBERON:0000956!2.36e-11!25;UBERON:0000203!2.36e-11!25;UBERON:0001981!1.09e-10!60;UBERON:0007500!1.09e-10!60;UBERON:0004537!1.09e-10!60;UBERON:0006965!1.09e-10!60;UBERON:0004872!4.54e-10!84;UBERON:0003103!7.68e-09!69;UBERON:0000062!8.22e-09!511;UBERON:0000489!1.54e-07!32;UBERON:0001637!2.39e-07!42;UBERON:0003509!2.39e-07!42;UBERON:0004572!2.39e-07!42;UBERON:0003076!3.39e-07!15;UBERON:0003057!3.39e-07!15;UBERON:0004211!3.92e-07!16;UBERON:0001285!3.92e-07!16;UBERON:0007684!3.92e-07!16;UBERON:0003220!3.92e-07!16;UBERON:0004208!3.92e-07!16;UBERON:0005172!5.14e-07!55;UBERON:0005173!5.14e-07!55;UBERON:0000080!5.76e-07!18;UBERON:0002120!5.76e-07!18;UBERON:0004875!5.76e-07!18;UBERON:0005721!5.76e-07!18;UBERON:0005754!5.76e-07!18;UBERON:0007297!5.76e-07!18;UBERON:0003887!5.93e-07!21;UBERON:0006555!6.54e-07!17;UBERON:0005103!6.54e-07!17;UBERON:0000083!6.54e-07!17;UBERON:0009201!6.54e-07!17;UBERON:0004819!6.54e-07!17;UBERON:0006553!6.54e-07!17;UBERON:0003074!6.54e-07!17;UBERON:0003060!6.54e-07!17;UBERON:0001009!6.88e-07!113;UBERON:0000353!7.99e-07!17;UBERON:0001986!8.25e-07!18;UBERON:0004638!8.25e-07!18;UBERON:0004852!8.25e-07!18;UBERON:0002417!9.25e-07!61;UBERON:0000916!9.25e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.01e-13;22!UBERON:0001950;7.00e-13;20!UBERON:0001869;3.56e-12;32!UBERON:0003528;1.18e-11;34!UBERON:0002020;1.18e-11;34!UBERON:0002791;2.17e-11;32!UBERON:0000956;2.38e-11;25!UBERON:0000203;2.38e-11;25!UBERON:0001893;3.05e-11;34!UBERON:0002780;2.57e-10;41!UBERON:0001890;2.57e-10;41!UBERON:0000073;4.58e-10;53!UBERON:0002616;4.58e-10;53!UBERON:0000955;7.16e-09;68!UBERON:0001017;4.91e-08;75!UBERON:0001016;7.61e-08;83!UBERON:0000489;2.19e-07;29!UBERON:0006555;5.19e-07;15!UBERON:0004819;5.19e-07;15!UBERON:0001285;5.19e-07;15!UBERON:0007684;5.19e-07;15!UBERON:0006554;6.57e-07;30!UBERON:0001008;6.57e-07;30!UBERON:0004638;7.99e-07;18!UBERON:0001986;7.99e-07;18!UBERON:0004852;7.99e-07;18 | |||
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| ||
|short_description=p1@AP2A2 | |||
}} | }} |
Latest revision as of 01:45, 25 September 2015
Short description: | p1@AP2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332231, ENST00000417081, ENST00000448757, ENST00000448903, ENST00000452310, ENST00000525796, ENST00000528195, ENST00000528815, ENST00000529125, ENST00000529858, ENST00000534328, uc001lss.2, uc001lst.1, uc009yco.1_5end |
EntrezGene: | AP2A2 |
HGNC: | 562 |
UniProt: | E7EVC3C9J1S3O94973E7ESQ4E9PNC4E9PJJ7E9PR62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 2.60e-13 | 45 |
endothelial cell | 5.84e-13 | 36 |
mesodermal cell | 1.65e-09 | 121 |
endothelial cell of vascular tree | 4.94e-07 | 24 |
epithelial cell of nephron | 5.29e-07 | 15 |
blood vessel endothelial cell | 8.25e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.25e-07 | 18 |