FFCP PHASE1:Hg19::chr11:70508351..70508382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZKU9 | |UniProt=B7ZKU9 | ||
|association_with_transcript=-406bp_to_ENST00000449116_5end | |association_with_transcript=-406bp_to_ENST00000449116_5end | ||
|cluster_id=chr11:70508351..70508382,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_SHANK2_5end | |description=CAGE_peak_4_at_SHANK2_5end | ||
|id=chr11:70508351..70508382,- | |id=chr11:70508351..70508382,- | ||
|ontology_enrichment_celltype=CL:0002322!1.64e-10!5;CL:0000047!9.59e-10!8;CL:0000540!2.46e-09!6;CL:0000031!2.46e-09!6;CL:0000404!2.46e-09!6 | |ontology_enrichment_celltype=CL:0002322!1.64e-10!5;CL:0000047!9.59e-10!8;CL:0000540!2.46e-09!6;CL:0000031!2.46e-09!6;CL:0000404!2.46e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.34e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.37e-19;82!UBERON:0010122;1.22e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;9.78e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.11e-07,6 | |||
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| ||
|short_description=p4@SHANK2 | |short_description=p4@SHANK2 | ||
}} | }} |
Latest revision as of 23:15, 19 September 2015
Short description: | p4@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHANK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -406bp_to_ENST00000449116_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | B7ZKU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.11e-07 | 6 |