FFCP PHASE1:Hg19::chr5:11904529..11904576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1501 | |EntrezGene=1501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2516 | |HGNC=2516 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQB3,D6R9A8,D6RHE9 | |UniProt=Q9UQB3,D6R9A8,D6RHE9 | ||
|association_with_transcript=-374bp_to_ENST00000304623,ENST00000458100,ENST00000504499_5end | |association_with_transcript=-374bp_to_ENST00000304623,ENST00000458100,ENST00000504499_5end | ||
|cluster_id=chr5:11904529..11904576,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_4_at_CTNND2_5end | |description=CAGE_peak_4_at_CTNND2_5end | ||
|id=chr5:11904529..11904576,- | |id=chr5:11904529..11904576,- | ||
|ontology_enrichment_celltype=CL:0002319!1.67e-09!25;CL:0000047!5.25e-08!8;CL:0000133!3.07e-07!59 | |ontology_enrichment_celltype=CL:0002319!1.67e-09!25;CL:0000047!5.25e-08!8;CL:0000133!3.07e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.97e-13;25!CL:0000540;1.51e-08;6!CL:0000404;1.51e-08;6!CL:0000128;4.61e-07;7!CL:0000126;4.61e-07;7!CL:0000127;4.61e-07;7!CL:0002322;6.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.08e-13,25;CL:0000047,4.45e-11,8;CL:0000133,3.53e-09,59;CL:0000540,1.59e-08,6;CL:0000031,1.59e-08,6;CL:0000404,1.59e-08,6;CL:0000128,4.48e-07,7;CL:0000126,4.48e-07,7;CL:0000127,4.48e-07,7;CL:0002453,4.48e-07,7;CL:0002322,6.60e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.41e-17;82!CL:0000031;1.51e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.09e-62!86;UBERON:0000073!1.00e-60!94;UBERON:0001016!1.00e-60!94;UBERON:0001017!1.26e-59!82;UBERON:0001049!2.59e-57!57;UBERON:0005068!2.59e-57!57;UBERON:0006241!2.59e-57!57;UBERON:0007135!2.59e-57!57;UBERON:0003075!2.51e-55!86;UBERON:0007284!2.51e-55!86;UBERON:0002346!5.50e-55!90;UBERON:0007023!1.82e-49!115;UBERON:0000955!7.86e-48!69;UBERON:0006238!7.86e-48!69;UBERON:0002616!8.17e-48!59;UBERON:0002780!3.99e-44!41;UBERON:0001890!3.99e-44!41;UBERON:0006240!3.99e-44!41;UBERON:0000924!6.56e-43!173;UBERON:0006601!6.56e-43!173;UBERON:0003080!1.17e-42!42;UBERON:0004121!1.94e-42!169;UBERON:0003056!3.00e-42!61;UBERON:0001893!1.15e-37!34;UBERON:0002020!1.55e-37!34;UBERON:0003528!1.55e-37!34;UBERON:0002791!1.60e-36!33;UBERON:0001869!6.59e-36!32;UBERON:0000153!2.17e-35!129;UBERON:0007811!2.17e-35!129;UBERON:0000033!1.85e-34!123;UBERON:0000956!1.07e-28!25;UBERON:0000203!1.07e-28!25;UBERON:0002619!3.19e-26!22;UBERON:0001950!3.84e-24!20;UBERON:0003076!3.36e-15!15;UBERON:0003057!3.36e-15!15;UBERON:0000025!5.00e-14!194;UBERON:0004733!1.79e-12!12;UBERON:0002028!1.79e-12!12;UBERON:0007277!1.79e-12!12;UBERON:0000064!4.93e-12!219;UBERON:0000483!1.38e-11!309;UBERON:0000119!3.43e-11!312;UBERON:0004732!3.43e-11!13;UBERON:0004111!1.08e-10!241;UBERON:0000475!1.43e-10!365;UBERON:0002420!2.01e-10!9;UBERON:0007245!2.01e-10!9;UBERON:0010009!2.01e-10!9;UBERON:0010011!2.01e-10!9;UBERON:0000454!2.01e-10!9;UBERON:0002308!3.50e-10!9;UBERON:0000125!3.50e-10!9;UBERON:0000477!3.75e-10!286;UBERON:0000468!3.90e-10!659;UBERON:0001871!5.18e-10!7;UBERON:0002680!8.22e-10!9;UBERON:0001895!8.22e-10!9;UBERON:0010092!8.22e-10!9;UBERON:0000922!1.33e-09!612;UBERON:0009663!2.55e-08!7;UBERON:0000062!3.33e-08!511;UBERON:0000200!4.98e-08!6;UBERON:0001894!8.98e-08!7;UBERON:0006222!8.98e-08!7;UBERON:0000481!1.22e-07!347;UBERON:0002050!2.74e-07!605;UBERON:0005423!2.74e-07!605;UBERON:0000467!3.19e-07!625;UBERON:0000480!3.86e-07!626;UBERON:0001872!4.53e-07!5;UBERON:0000923!4.68e-07!604;UBERON:0005291!4.68e-07!604;UBERON:0006598!4.68e-07!604;UBERON:0002532!4.68e-07!604;UBERON:0002021!5.52e-07!5;UBERON:0002037!5.89e-07!6;UBERON:0006215!5.89e-07!6;UBERON:0000349!7.71e-07!5 | |ontology_enrichment_uberon=UBERON:0005743!1.09e-62!86;UBERON:0000073!1.00e-60!94;UBERON:0001016!1.00e-60!94;UBERON:0001017!1.26e-59!82;UBERON:0001049!2.59e-57!57;UBERON:0005068!2.59e-57!57;UBERON:0006241!2.59e-57!57;UBERON:0007135!2.59e-57!57;UBERON:0003075!2.51e-55!86;UBERON:0007284!2.51e-55!86;UBERON:0002346!5.50e-55!90;UBERON:0007023!1.82e-49!115;UBERON:0000955!7.86e-48!69;UBERON:0006238!7.86e-48!69;UBERON:0002616!8.17e-48!59;UBERON:0002780!3.99e-44!41;UBERON:0001890!3.99e-44!41;UBERON:0006240!3.99e-44!41;UBERON:0000924!6.56e-43!173;UBERON:0006601!6.56e-43!173;UBERON:0003080!1.17e-42!42;UBERON:0004121!1.94e-42!169;UBERON:0003056!3.00e-42!61;UBERON:0001893!1.15e-37!34;UBERON:0002020!1.55e-37!34;UBERON:0003528!1.55e-37!34;UBERON:0002791!1.60e-36!33;UBERON:0001869!6.59e-36!32;UBERON:0000153!2.17e-35!129;UBERON:0007811!2.17e-35!129;UBERON:0000033!1.85e-34!123;UBERON:0000956!1.07e-28!25;UBERON:0000203!1.07e-28!25;UBERON:0002619!3.19e-26!22;UBERON:0001950!3.84e-24!20;UBERON:0003076!3.36e-15!15;UBERON:0003057!3.36e-15!15;UBERON:0000025!5.00e-14!194;UBERON:0004733!1.79e-12!12;UBERON:0002028!1.79e-12!12;UBERON:0007277!1.79e-12!12;UBERON:0000064!4.93e-12!219;UBERON:0000483!1.38e-11!309;UBERON:0000119!3.43e-11!312;UBERON:0004732!3.43e-11!13;UBERON:0004111!1.08e-10!241;UBERON:0000475!1.43e-10!365;UBERON:0002420!2.01e-10!9;UBERON:0007245!2.01e-10!9;UBERON:0010009!2.01e-10!9;UBERON:0010011!2.01e-10!9;UBERON:0000454!2.01e-10!9;UBERON:0002308!3.50e-10!9;UBERON:0000125!3.50e-10!9;UBERON:0000477!3.75e-10!286;UBERON:0000468!3.90e-10!659;UBERON:0001871!5.18e-10!7;UBERON:0002680!8.22e-10!9;UBERON:0001895!8.22e-10!9;UBERON:0010092!8.22e-10!9;UBERON:0000922!1.33e-09!612;UBERON:0009663!2.55e-08!7;UBERON:0000062!3.33e-08!511;UBERON:0000200!4.98e-08!6;UBERON:0001894!8.98e-08!7;UBERON:0006222!8.98e-08!7;UBERON:0000481!1.22e-07!347;UBERON:0002050!2.74e-07!605;UBERON:0005423!2.74e-07!605;UBERON:0000467!3.19e-07!625;UBERON:0000480!3.86e-07!626;UBERON:0001872!4.53e-07!5;UBERON:0000923!4.68e-07!604;UBERON:0005291!4.68e-07!604;UBERON:0006598!4.68e-07!604;UBERON:0002532!4.68e-07!604;UBERON:0002021!5.52e-07!5;UBERON:0002037!5.89e-07!6;UBERON:0006215!5.89e-07!6;UBERON:0000349!7.71e-07!5 | ||
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| ||
|short_description=p4@CTNND2 | |short_description=p4@CTNND2 | ||
}} | }} |
Latest revision as of 22:24, 19 September 2015
Short description: | p4@CTNND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTNND2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -374bp_to_ENST00000304623, ENST00000458100, ENST00000504499_5end |
EntrezGene: | CTNND2 |
HGNC: | 2516 |
UniProt: | Q9UQB3D6R9A8D6RHE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.08e-13 | 25 |
neuronal stem cell | 4.45e-11 | 8 |
neurectodermal cell | 3.53e-09 | 59 |
neuron | 1.59e-08 | 6 |
neuroblast | 1.59e-08 | 6 |
electrically signaling cell | 1.59e-08 | 6 |
oligodendrocyte | 4.48e-07 | 7 |
macroglial cell | 4.48e-07 | 7 |
astrocyte | 4.48e-07 | 7 |
oligodendrocyte precursor cell | 4.48e-07 | 7 |
embryonic stem cell | 6.60e-07 | 5 |