FFCP PHASE1:Hg19::chr19:49622787..49622854,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49622787..49622854,+
|short_description=p2@PPFIA3
|description=CAGE_peak_2_at_PPFIA3_5end
|association_with_transcript=124bp_to_ENST00000334186,NM_003660,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt=O75145 | |UniProt=O75145 | ||
|association_with_transcript=124bp_to_ENST00000334186,NM_003660,uc002pmr.2,uc010yai.1_5end | |||
|cluster_id=chr19:49622787..49622854,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_PPFIA3_5end | |||
|id=chr19:49622787..49622854,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.18e-19;82!UBERON:0006215;2.76e-08;3 | |||
|ontology_enrichment_disease=DOID:171!3.36e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.67e-14;10!DOID:169;3.41e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.84e-14,10;DOID:169,3.26e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;9.05e-45;22!UBERON:0002780;3.40e-43;41!UBERON:0001890;3.40e-43;41!UBERON:0001869;2.40e-42;32!UBERON:0001893;6.71e-41;34!UBERON:0001950;1.42e-40;20!UBERON:0003528;1.42e-40;34!UBERON:0002020;1.42e-40;34!UBERON:0000073;3.28e-40;53!UBERON:0002616;3.28e-40;53!UBERON:0002791;2.13e-39;32!UBERON:0000956;9.09e-39;25!UBERON:0000203;9.09e-39;25!UBERON:0000955;5.43e-30;68!UBERON:0001017;3.62e-28;75!UBERON:0001016;3.51e-27;83!UBERON:0000200;4.34e-14;6!UBERON:0001894;5.90e-14;7!UBERON:0004732;3.16e-12;13!UBERON:0002021;3.84e-12;5!UBERON:0001871;6.22e-12;6!UBERON:0000349;9.93e-12;5!UBERON:0001872;1.26e-11;5!UBERON:0011216;1.64e-11;132!UBERON:0002420;7.02e-11;9!UBERON:0007245;7.02e-11;9!UBERON:0010009;7.02e-11;9!UBERON:0010011;7.02e-11;9!UBERON:0000454;7.02e-11;9!UBERON:0007023;7.74e-11;114!UBERON:0004733;7.79e-11;12!UBERON:0002028;7.79e-11;12!UBERON:0000125;1.37e-10;9!UBERON:0002308;1.37e-10;9!UBERON:0003296;2.76e-09;4!UBERON:0010133;2.76e-09;4!UBERON:0002680;8.21e-09;9!UBERON:0001895;8.21e-09;9!UBERON:0002298;1.05e-08;6!UBERON:0002784;1.60e-08;4!UBERON:0002346;4.44e-08;4!UBERON:0000923;4.44e-08;4!UBERON:0010316;4.44e-08;4!UBERON:0005291;4.44e-08;4!UBERON:0001870;8.68e-08;3!UBERON:0009663;2.58e-07;7!UBERON:0000988;4.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.68e-72,56;UBERON:0005068,4.68e-72,56;UBERON:0006241,4.68e-72,56;UBERON:0007135,4.68e-72,56;UBERON:0000073,5.07e-70,53;UBERON:0002616,5.07e-70,53;UBERON:0001016,9.33e-70,89;UBERON:0001017,1.52e-65,81;UBERON:0000955,2.96e-65,68;UBERON:0006238,2.96e-65,68;UBERON:0002780,1.38e-60,41;UBERON:0001890,1.38e-60,41;UBERON:0003080,1.38e-60,41;UBERON:0006240,1.38e-60,41;UBERON:0002346,2.05e-57,86;UBERON:0003075,1.95e-51,82;UBERON:0007284,1.95e-51,82;UBERON:0001869,4.04e-48,32;UBERON:0003528,4.89e-48,34;UBERON:0002020,4.89e-48,34;UBERON:0001893,6.28e-48,34;UBERON:0010371,7.53e-45,104;UBERON:0002619,7.95e-45,22;UBERON:0002791,2.28e-44,32;UBERON:0003056,4.48e-44,61;UBERON:0004121,5.89e-41,171;UBERON:0000924,5.89e-41,171;UBERON:0006601,5.89e-41,171;UBERON:0001950,1.30e-40,20;UBERON:0000956,8.12e-39,25;UBERON:0000203,8.12e-39,25;UBERON:0007023,2.28e-33,114;UBERON:0010314,3.76e-28,132;UBERON:0011216,2.31e-27,223;UBERON:0000025,3.59e-14,192;UBERON:0000200,4.27e-14,6;UBERON:0001894,6.18e-14,7;UBERON:0006222,6.18e-14,7;UBERON:0003076,6.72e-13,15;UBERON:0003057,6.72e-13,15;UBERON:0004732,2.86e-12,13;UBERON:0002021,4.17e-12,5;UBERON:0001871,5.54e-12,6;UBERON:0000349,8.65e-12,5;UBERON:0001872,1.10e-11,5;UBERON:0002420,5.89e-11,9;UBERON:0007245,5.89e-11,9;UBERON:0010009,5.89e-11,9;UBERON:0010011,5.89e-11,9;UBERON:0000454,5.89e-11,9;UBERON:0004733,6.73e-11,12;UBERON:0002028,6.73e-11,12;UBERON:0007277,6.73e-11,12;UBERON:0000125,1.07e-10,9;UBERON:0002308,1.07e-10,9;UBERON:0004111,1.96e-09,240;UBERON:0003296,2.71e-09,4;UBERON:0010133,2.71e-09,4;UBERON:0000483,4.66e-09,306;UBERON:0002680,7.17e-09,9;UBERON:0001895,7.17e-09,9;UBERON:0010092,7.17e-09,9;UBERON:0000119,7.80e-09,309;UBERON:0002298,8.77e-09,6;UBERON:0002784,1.88e-08,4;UBERON:0001870,9.00e-08,3;UBERON:0009663,2.33e-07,7;UBERON:0000988,3.47e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0.383829398097213,0,0,0.30120591877825,0,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,1.94826728407911,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,1.57174890597255,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0.545492241181669,0.573609190778008,0.365921118388786,0.132529768321485,0.464775771478074,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,1.59884970106048,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.317489471460845,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.394061520403854,0.431255149719035,0.128343036279748,0.508189248444927,2.60279707715243,0,3.18280904135263,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0.577566499444116,1.14853107599234,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,2.24330549367694,0,0,0,0.432807638929335,0.213425530045242,0.318852545457645,0,0,0.846694330895531,0,0,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0,0,2.06103206853459,0,0.223676107892416,0,0.390776190804081,0,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0,0.568272293612826,0,0,0.307160702099232,5.96488588659779,6.6114625712941,0.111308705022906,0.16480387422676,0,0,0.552567831062295,1.51159648712566,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,15.5093239375235,6.02992638052033,13.9729658600836,1.5625665665114,2.18649999990489,0,0.1137934482855,0.508507300585533,0.236387681767936,1.37897349296586,3.49925536059905,1.73624994933292,0.885741385813839,4.46206822914009,10.6807215421958,16.3657304698212,10.3441666633742,7.23971810608109,0.10893846351899,0.83654246567162,0.153900517007594,0.569710279235006,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0.210998064528027,0,0,0,0,0.353830258013357,1.83309043480088,2.37216902944498,0.247127877893006,0.730953646538188,1.21322039365219,0,2.57690890297873,0,0.391329237864179,0,1.57833761139756,0,10.4064738954367,0.126373159256976,2.25485129121739,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0.17472666824203,0.343972064943233,0,0.65780385377567,0.328461828212837,0.484945082442097,0,2.48578814858586,0,0,7.15411994301429,0,0,0.213452994739353,0.19980960958213,1.15272333723285,0.229073192331831,6.00582492516876,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0.288950589901519,1.80126086612937,1.50595916781192,0,0,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,0,0,0.551482276150566,0.412079291905832,0.876246070104404,0.590564889088493,0,7.15706720828373,8.98942480336399,0,0.275078873194468,0,0.449947783103001,1.5476039091159,10.0236768485741,0.670869375198532,0.157611414598396,0.157363764404994,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.340776043570843,0.453248366080503,0,0,3.74920573448497,2.90911723833918,0.171086837884329,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,6.2024772597689,6.10131324509816,8.13741049592249,0.573409195690071,2.10765197920019,2.98062734118641,3.45871587340577,0.124980407962107,0.151649117541648,0,0.235265819698172,1.87333962322753,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0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| ||
|short_description=p2@PPFIA3 | |||
}} | }} |
Latest revision as of 06:17, 19 September 2015
Short description: | p2@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPFIA3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 124bp_to_ENST00000334186, NM_003660, uc002pmr.2, uc010yai.1_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | O75145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.84e-14 | 10 |
neuroendocrine tumor | 3.26e-08 | 6 |