FFCP PHASE1:Hg19::chr1:12402937..12403001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55187 | |EntrezGene=55187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23595 | |HGNC=23595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_AK057675_5end | |association_with_transcript=-94bp_to_AK057675_5end | ||
|cluster_id=chr1:12402937..12403001,+ | |||
|description=CAGE_peak_3_at_VPS13D_5end | |description=CAGE_peak_3_at_VPS13D_5end | ||
|id=chr1:12402937..12403001,+ | |id=chr1:12402937..12403001,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.69e-13;82!UBERON:0002532;1.10e-08;206!UBERON:0010316;1.10e-08;206!UBERON:0006603;4.35e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;4.46e-36;22!UBERON:0003528;7.15e-35;34!UBERON:0002020;7.15e-35;34!UBERON:0001869;9.25e-35;32!UBERON:0002791;3.43e-34;32!UBERON:0001893;5.80e-34;34!UBERON:0000956;6.03e-34;25!UBERON:0000203;6.03e-34;25!UBERON:0001950;1.07e-32;20!UBERON:0002780;7.90e-27;41!UBERON:0001890;7.90e-27;41!UBERON:0000073;1.75e-24;53!UBERON:0002616;1.75e-24;53!UBERON:0007023;1.17e-23;114!UBERON:0001017;9.11e-17;75!UBERON:0000955;2.47e-15;68!UBERON:0000200;1.26e-13;6!UBERON:0001016;1.06e-12;83!UBERON:0001872;3.15e-11;5!UBERON:0001871;7.60e-10;6!UBERON:0002298;1.01e-09;6!UBERON:0004732;2.56e-09;13!UBERON:0000125;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0004733;6.32e-08;12!UBERON:0002028;6.32e-08;12!UBERON:0001870;1.27e-07;3!UBERON:0002021;1.77e-07;5!UBERON:0000369;1.78e-07;4!UBERON:0002435;1.78e-07;4!UBERON:0000204;1.78e-07;4!UBERON:0011216;2.17e-07;132!UBERON:0004151;2.57e-07;3!UBERON:0003978;3.94e-07;3!UBERON:0000946;3.94e-07;3!UBERON:0000349;9.14e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0.831076008928724,0,0,0,0.769350375349168,0,0,0.9273691048295,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,2.3441308683503,0,0,0,0,0,0.921482106297696,0.994147647766298,4.50142132513641,0.111308705022906,0,0.211125408127993,2.98871982376605,1.10513566212459,0,0,0,0.311039587661807,0.0898683511473268,0,0,3.64980600856654,0,0,3.87733098438087,12.8947656444973,0,0,0.0874599999961957,1.44999915086959,0,0,0.236387681767936,0,0,0.347249989866585,1.77148277162768,2.05013945663194,3.05163472634166,1.65868889896837,0.591095237907095,6.58156191461918,0.10893846351899,0,5.61736887077719,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0.432777279484182,3.98104772431402,2.56526937059684,0,0,0,0,0.404406797884062,8.82835412028668,0.702793337176017,0,0,0,4.73501283419269,1.20990716048664,1.83643656978294,1.95878396848313,0,0,0,0,0,0,0.284609546029793,0,0,0,0,9.43524008506963,0.171986032471617,0.19351266257817,0,0,1.93978032976839,0,1.12990370390266,0.137041924646751,0,14.2449290900727,0,0,1.92107695265417,0.19980960958213,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0.600420288709789,0.958337652243951,0,0,0,4.46851842035607,11.9163420486076,15.0753335161131,15.9743200399193,27.4704670807405,13.1671159890705,8.33075058835406,0,0,0.157566364614447,0,0,0,0,3.97614844904652,5.5843396505746,0.160753148465019,0,0.415440338029185,0,0.77380195455795,11.9069131049728,0,1.18208560948797,2.15063811353492,0,0,0,7.14695326373367,16.5522992591358,0,0,0,0,0,0,0,0,0,0,2.06852730178481,1.98348902614035,0,0,0.747511887973863,0.314408610199332,1.24271716604159,0.992332043623902,0,0,0,0,5.013797880454,0.919036730290385,1.63936315354902,0.157054096250234,27.4681135789766,15.9854407021572,47.8229355298829,2.86704597845036,1.55300672151593,1.8628920882415,0,0,0.151649117541648,0,0,0.468334905806882,23.3322856063429,0.298509605773748,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.5229234425946,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.255788742607303,0,0,0.327628914576042,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,8.92786228840787,19.8375206855819,34.3212796972875,8.61488729811171,0.504143392443436,15.2145955421279,7.2664040534333,4.28308260777463,0,0,0,0,0.381382095467167,0,0,4.06135773085989,0,0.781514011233092,0,0,0,20.8691136470839,18.7458743667323,52.4984463113008,24.5419185450419,3.28184885410932,0.548257766857182,7.93937885422871,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0.443511850813194,0,0,1.63127359144396,20.915741992986,0,0,2.04082041411336,1.88538707899202,0,3.65263488203798,0,0,0.714765441766563,0,0,0.173858272302579,0,0,0,0.691259661814092,2.58136415292167,0,0,2.96370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| ||
|short_description=p3@VPS13D | |short_description=p3@VPS13D | ||
}} | }} |
Latest revision as of 13:59, 16 September 2015
Short description: | p3@VPS13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VPS13D_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_AK057675_5end |
EntrezGene: | VPS13D |
HGNC: | 23595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data