FFCP PHASE1:Hg19::chr6:154568632..154568656,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26034 | |EntrezGene=26034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21204 | |HGNC=21204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000518162_5end | |association_with_transcript=57bp_to_ENST00000518162_5end | ||
|cluster_id=chr6:154568632..154568656,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_IPCEF1_5end | |description=CAGE_peak_2_at_IPCEF1_5end | ||
|id=chr6:154568632..154568656,- | |id=chr6:154568632..154568656,- | ||
|ontology_enrichment_celltype=CL:0000791!2.94e-16!18;CL:0000789!2.94e-16!18;CL:0002420!2.94e-16!18;CL:0002419!2.94e-16!18;CL:0000790!2.94e-16!18;CL:0000084!3.91e-12!25;CL:0000827!3.91e-12!25;CL:0000738!3.77e-11!140;CL:0000625!2.58e-10!11;CL:0002087!1.99e-09!119;CL:0000838!3.67e-09!52;CL:0000037!6.83e-09!172;CL:0000566!6.83e-09!172;CL:0000542!8.33e-09!53;CL:0000051!8.33e-09!53;CL:0002032!1.36e-07!165;CL:0000837!1.36e-07!165;CL:0002031!1.42e-07!124;CL:0000988!2.29e-07!182;CL:0000624!4.63e-07!6 | |ontology_enrichment_celltype=CL:0000791!2.94e-16!18;CL:0000789!2.94e-16!18;CL:0002420!2.94e-16!18;CL:0002419!2.94e-16!18;CL:0000790!2.94e-16!18;CL:0000084!3.91e-12!25;CL:0000827!3.91e-12!25;CL:0000738!3.77e-11!140;CL:0000625!2.58e-10!11;CL:0002087!1.99e-09!119;CL:0000838!3.67e-09!52;CL:0000037!6.83e-09!172;CL:0000566!6.83e-09!172;CL:0000542!8.33e-09!53;CL:0000051!8.33e-09!53;CL:0002032!1.36e-07!165;CL:0000837!1.36e-07!165;CL:0002031!1.42e-07!124;CL:0000988!2.29e-07!182;CL:0000624!4.63e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.76e-21;18!CL:0000789;4.76e-21;18!CL:0002419;4.76e-21;18!CL:0000084;1.78e-15;25!CL:0000625;1.10e-13;11!CL:0000624;1.20e-10;6!CL:0000542;9.81e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.71e-21,18;CL:0000789,5.71e-21,18;CL:0002420,5.71e-21,18;CL:0002419,5.71e-21,18;CL:0000790,5.71e-21,18;CL:0000084,2.33e-15,25;CL:0000827,2.33e-15,25;CL:0000838,8.01e-14,52;CL:0000625,1.32e-13,11;CL:0000542,2.02e-13,53;CL:0000051,2.02e-13,53;CL:0000624,1.20e-10,6;CL:0002087,5.81e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.76e-21;18!UBERON:0006601;1.65e-10;82!CL:0000051;9.81e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-44!115;UBERON:0001049!6.19e-32!57;UBERON:0005068!6.19e-32!57;UBERON:0006241!6.19e-32!57;UBERON:0007135!6.19e-32!57;UBERON:0001017!1.81e-29!82;UBERON:0005743!5.48e-29!86;UBERON:0002780!6.35e-27!41;UBERON:0001890!6.35e-27!41;UBERON:0006240!6.35e-27!41;UBERON:0000955!1.51e-26!69;UBERON:0006238!1.51e-26!69;UBERON:0003080!6.35e-26!42;UBERON:0002616!9.60e-26!59;UBERON:0001893!3.43e-24!34;UBERON:0000073!5.00e-24!94;UBERON:0001016!5.00e-24!94;UBERON:0002020!2.01e-23!34;UBERON:0003528!2.01e-23!34;UBERON:0002791!3.59e-23!33;UBERON:0001869!1.19e-22!32;UBERON:0002619!2.00e-20!22;UBERON:0003075!9.84e-20!86;UBERON:0007284!9.84e-20!86;UBERON:0002346!2.15e-19!90;UBERON:0001950!2.76e-19!20;UBERON:0000956!5.89e-17!25;UBERON:0000203!5.89e-17!25;UBERON:0003056!1.48e-16!61;UBERON:0000153!8.09e-15!129;UBERON:0007811!8.09e-15!129;UBERON:0000033!6.36e-13!123;UBERON:0002420!1.42e-08!9;UBERON:0007245!1.42e-08!9;UBERON:0010009!1.42e-08!9;UBERON:0010011!1.42e-08!9;UBERON:0000454!1.42e-08!9;UBERON:0002308!6.01e-08!9;UBERON:0000125!6.01e-08!9;UBERON:0000924!6.72e-08!173;UBERON:0006601!6.72e-08!173;UBERON:0004121!7.69e-08!169;UBERON:0000200!8.35e-08!6;UBERON:0003076!2.75e-07!15;UBERON:0003057!2.75e-07!15;UBERON:0009663!6.14e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-44!115;UBERON:0001049!6.19e-32!57;UBERON:0005068!6.19e-32!57;UBERON:0006241!6.19e-32!57;UBERON:0007135!6.19e-32!57;UBERON:0001017!1.81e-29!82;UBERON:0005743!5.48e-29!86;UBERON:0002780!6.35e-27!41;UBERON:0001890!6.35e-27!41;UBERON:0006240!6.35e-27!41;UBERON:0000955!1.51e-26!69;UBERON:0006238!1.51e-26!69;UBERON:0003080!6.35e-26!42;UBERON:0002616!9.60e-26!59;UBERON:0001893!3.43e-24!34;UBERON:0000073!5.00e-24!94;UBERON:0001016!5.00e-24!94;UBERON:0002020!2.01e-23!34;UBERON:0003528!2.01e-23!34;UBERON:0002791!3.59e-23!33;UBERON:0001869!1.19e-22!32;UBERON:0002619!2.00e-20!22;UBERON:0003075!9.84e-20!86;UBERON:0007284!9.84e-20!86;UBERON:0002346!2.15e-19!90;UBERON:0001950!2.76e-19!20;UBERON:0000956!5.89e-17!25;UBERON:0000203!5.89e-17!25;UBERON:0003056!1.48e-16!61;UBERON:0000153!8.09e-15!129;UBERON:0007811!8.09e-15!129;UBERON:0000033!6.36e-13!123;UBERON:0002420!1.42e-08!9;UBERON:0007245!1.42e-08!9;UBERON:0010009!1.42e-08!9;UBERON:0010011!1.42e-08!9;UBERON:0000454!1.42e-08!9;UBERON:0002308!6.01e-08!9;UBERON:0000125!6.01e-08!9;UBERON:0000924!6.72e-08!173;UBERON:0006601!6.72e-08!173;UBERON:0004121!7.69e-08!169;UBERON:0000200!8.35e-08!6;UBERON:0003076!2.75e-07!15;UBERON:0003057!2.75e-07!15;UBERON:0009663!6.14e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.56e-31;34!UBERON:0001950;3.57e-31;20!UBERON:0002619;1.47e-30;22!UBERON:0001869;7.75e-30;32!UBERON:0002791;2.02e-29;32!UBERON:0003528;5.92e-28;34!UBERON:0002020;5.92e-28;34!UBERON:0000956;3.45e-26;25!UBERON:0000203;3.45e-26;25!UBERON:0002780;3.74e-26;41!UBERON:0001890;3.74e-26;41!UBERON:0000073;5.22e-26;53!UBERON:0002616;5.22e-26;53!UBERON:0001017;2.83e-17;75!UBERON:0000955;2.10e-16;68!UBERON:0001016;8.25e-14;83!UBERON:0000200;7.13e-12;6!UBERON:0007023;2.55e-11;114!UBERON:0002420;8.18e-11;9!UBERON:0007245;8.18e-11;9!UBERON:0010009;8.18e-11;9!UBERON:0010011;8.18e-11;9!UBERON:0000454;8.18e-11;9!UBERON:0000178;1.19e-10;15!UBERON:0000179;1.19e-10;15!UBERON:0000463;1.19e-10;15!UBERON:0001872;1.08e-09;5!UBERON:0002021;2.38e-09;5!UBERON:0001871;8.21e-09;6!UBERON:0009663;3.29e-08;7!UBERON:0000125;3.94e-08;9!UBERON:0002308;3.94e-08;9!UBERON:0002390;6.61e-08;32!UBERON:0000369;9.62e-08;4!UBERON:0002435;9.62e-08;4!UBERON:0000204;9.62e-08;4!UBERON:0004733;2.79e-07;12!UBERON:0002028;2.79e-07;12!UBERON:0004177;3.06e-07;5!UBERON:0005057;3.06e-07;5!UBERON:0001870;7.81e-07;3 | |||
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| ||
|short_description=p2@IPCEF1 | |short_description=p2@IPCEF1 | ||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p2@IPCEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IPCEF1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 57bp_to_ENST00000518162_5end |
EntrezGene: | IPCEF1 |
HGNC: | 21204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.71e-21 | 18 |
alpha-beta T cell | 5.71e-21 | 18 |
immature T cell | 5.71e-21 | 18 |
mature T cell | 5.71e-21 | 18 |
immature alpha-beta T cell | 5.71e-21 | 18 |
T cell | 2.33e-15 | 25 |
pro-T cell | 2.33e-15 | 25 |
lymphoid lineage restricted progenitor cell | 8.01e-14 | 52 |
CD8-positive, alpha-beta T cell | 1.32e-13 | 11 |
lymphocyte | 2.02e-13 | 53 |
common lymphoid progenitor | 2.02e-13 | 53 |
CD4-positive, alpha-beta T cell | 1.20e-10 | 6 |
nongranular leukocyte | 5.81e-07 | 115 |