FFCP PHASE1:Hg19::chr19:1908013..1908035,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113179 | |EntrezGene=113179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25151 | |HGNC=25151 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFC1 | |UniProt=C9JFC1 | ||
|association_with_transcript=0bp_to_ENST00000454697_5end | |association_with_transcript=0bp_to_ENST00000454697_5end | ||
|cluster_id=chr19:1908013..1908035,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_ADAT3_5end | |description=CAGE_peak_3_at_ADAT3_5end | ||
|id=chr19:1908013..1908035,+ | |id=chr19:1908013..1908035,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.15e-26;1!UBERON:0003056;1.01e-09;3!UBERON:0006241;1.41e-09;3!UBERON:0003057;1.41e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.69e-07;4!DOID:1612;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.49e-07,4;DOID:1612,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-46!115;UBERON:0001049!4.07e-37!57;UBERON:0005068!4.07e-37!57;UBERON:0006241!4.07e-37!57;UBERON:0007135!4.07e-37!57;UBERON:0002616!1.43e-32!59;UBERON:0000955!3.26e-31!69;UBERON:0006238!3.26e-31!69;UBERON:0001017!1.52e-29!82;UBERON:0005743!7.97e-28!86;UBERON:0000073!1.69e-26!94;UBERON:0001016!1.69e-26!94;UBERON:0002780!1.84e-25!41;UBERON:0001890!1.84e-25!41;UBERON:0006240!1.84e-25!41;UBERON:0002020!3.18e-25!34;UBERON:0003528!3.18e-25!34;UBERON:0001893!4.49e-25!34;UBERON:0003080!9.53e-25!42;UBERON:0002791!5.27e-23!33;UBERON:0003075!3.16e-22!86;UBERON:0007284!3.16e-22!86;UBERON:0002346!6.35e-21!90;UBERON:0001869!1.44e-20!32;UBERON:0000033!7.00e-20!123;UBERON:0000153!1.40e-18!129;UBERON:0007811!1.40e-18!129;UBERON:0002308!2.31e-17!9;UBERON:0000125!2.31e-17!9;UBERON:0001950!7.69e-16!20;UBERON:0003056!1.41e-15!61;UBERON:0004121!1.53e-15!169;UBERON:0002298!2.45e-15!8;UBERON:0000924!5.53e-15!173;UBERON:0006601!5.53e-15!173;UBERON:0002619!2.94e-14!22;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0000956!2.42e-12!25;UBERON:0000203!2.42e-12!25;UBERON:0004732!2.79e-12!13;UBERON:0000025!1.34e-11!194;UBERON:0004111!1.50e-11!241;UBERON:0009663!1.53e-11!7;UBERON:0000988!2.40e-11!3;UBERON:0006331!3.26e-11!3;UBERON:0001872!8.72e-11!5;UBERON:0004733!7.43e-10!12;UBERON:0002028!7.43e-10!12;UBERON:0007277!7.43e-10!12;UBERON:0000477!1.11e-09!286;UBERON:0000064!4.43e-09!219;UBERON:0000475!5.09e-09!365;UBERON:0002420!6.76e-09!9;UBERON:0007245!6.76e-09!9;UBERON:0010009!6.76e-09!9;UBERON:0010011!6.76e-09!9;UBERON:0000454!6.76e-09!9;UBERON:0000200!8.63e-09!6;UBERON:0000062!1.97e-08!511;UBERON:0005162!2.46e-08!2;UBERON:0000122!2.46e-08!2;UBERON:0002148!4.56e-08!2;UBERON:0009662!4.56e-08!2;UBERON:0001875!1.09e-07!2;UBERON:0006514!1.09e-07!2;UBERON:0001870!1.84e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!2.48e-46!115;UBERON:0001049!4.07e-37!57;UBERON:0005068!4.07e-37!57;UBERON:0006241!4.07e-37!57;UBERON:0007135!4.07e-37!57;UBERON:0002616!1.43e-32!59;UBERON:0000955!3.26e-31!69;UBERON:0006238!3.26e-31!69;UBERON:0001017!1.52e-29!82;UBERON:0005743!7.97e-28!86;UBERON:0000073!1.69e-26!94;UBERON:0001016!1.69e-26!94;UBERON:0002780!1.84e-25!41;UBERON:0001890!1.84e-25!41;UBERON:0006240!1.84e-25!41;UBERON:0002020!3.18e-25!34;UBERON:0003528!3.18e-25!34;UBERON:0001893!4.49e-25!34;UBERON:0003080!9.53e-25!42;UBERON:0002791!5.27e-23!33;UBERON:0003075!3.16e-22!86;UBERON:0007284!3.16e-22!86;UBERON:0002346!6.35e-21!90;UBERON:0001869!1.44e-20!32;UBERON:0000033!7.00e-20!123;UBERON:0000153!1.40e-18!129;UBERON:0007811!1.40e-18!129;UBERON:0002308!2.31e-17!9;UBERON:0000125!2.31e-17!9;UBERON:0001950!7.69e-16!20;UBERON:0003056!1.41e-15!61;UBERON:0004121!1.53e-15!169;UBERON:0002298!2.45e-15!8;UBERON:0000924!5.53e-15!173;UBERON:0006601!5.53e-15!173;UBERON:0002619!2.94e-14!22;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0000956!2.42e-12!25;UBERON:0000203!2.42e-12!25;UBERON:0004732!2.79e-12!13;UBERON:0000025!1.34e-11!194;UBERON:0004111!1.50e-11!241;UBERON:0009663!1.53e-11!7;UBERON:0000988!2.40e-11!3;UBERON:0006331!3.26e-11!3;UBERON:0001872!8.72e-11!5;UBERON:0004733!7.43e-10!12;UBERON:0002028!7.43e-10!12;UBERON:0007277!7.43e-10!12;UBERON:0000477!1.11e-09!286;UBERON:0000064!4.43e-09!219;UBERON:0000475!5.09e-09!365;UBERON:0002420!6.76e-09!9;UBERON:0007245!6.76e-09!9;UBERON:0010009!6.76e-09!9;UBERON:0010011!6.76e-09!9;UBERON:0000454!6.76e-09!9;UBERON:0000200!8.63e-09!6;UBERON:0000062!1.97e-08!511;UBERON:0005162!2.46e-08!2;UBERON:0000122!2.46e-08!2;UBERON:0002148!4.56e-08!2;UBERON:0009662!4.56e-08!2;UBERON:0001875!1.09e-07!2;UBERON:0006514!1.09e-07!2;UBERON:0001870!1.84e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.88e-50;2!UBERON:0000122;1.88e-50;2!UBERON:0000941;2.15e-26;1!UBERON:0001785;2.15e-26;1!UBERON:0002464;2.15e-26;1!UBERON:0004904;2.15e-26;1!UBERON:0001021;2.15e-26;1!UBERON:0002336;5.92e-26;1!UBERON:0011215;5.92e-26;1!UBERON:0001018;5.92e-26;1!UBERON:0002473;5.92e-26;1!UBERON:0005340;5.92e-26;1!UBERON:0003544;5.92e-26;1!UBERON:0005970;5.92e-26;1!UBERON:0002316;5.92e-26;1!UBERON:0001020;5.92e-26;1!UBERON:0002437;5.92e-26;1!UBERON:0004732;6.81e-18;13!UBERON:0002298;1.85e-17;6!UBERON:0003714;6.43e-14;2!UBERON:0001897;1.07e-13;2!UBERON:0010225;1.07e-13;2!UBERON:0000988;1.41e-09;3!UBERON:0001896;1.41e-09;3!UBERON:0002240;1.41e-09;3!UBERON:0005174;1.41e-09;3!UBERON:0005290;1.41e-09;3!UBERON:0001137;1.41e-09;3!UBERON:0004733;3.13e-09;12!UBERON:0002028;3.13e-09;12!UBERON:0002784;1.69e-07;4!UBERON:0000073;5.11e-07;53!UBERON:0002616;5.11e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,8.82e-51,2;UBERON:0000122,8.82e-51,2;UBERON:0000941,2.16e-26,1;UBERON:0001785,2.16e-26,1;UBERON:0002464,2.16e-26,1;UBERON:0004904,2.16e-26,1;UBERON:0001021,2.16e-26,1;UBERON:0003902,2.16e-26,1;UBERON:0005425,2.16e-26,1;UBERON:0002336,2.78e-26,1;UBERON:0011215,2.78e-26,1;UBERON:0001018,2.78e-26,1;UBERON:0002473,2.78e-26,1;UBERON:0005340,2.78e-26,1;UBERON:0003544,2.78e-26,1;UBERON:0005970,2.78e-26,1;UBERON:0002316,2.78e-26,1;UBERON:0001020,2.78e-26,1;UBERON:0002437,2.78e-26,1;UBERON:0004732,6.43e-18,13;UBERON:0002298,1.71e-17,6;UBERON:0003076,1.59e-15,15;UBERON:0003057,1.59e-15,15;UBERON:0003714,6.43e-14,2;UBERON:0001897,1.55e-13,2;UBERON:0010225,1.55e-13,2;UBERON:0001049,4.24e-11,56;UBERON:0005068,4.24e-11,56;UBERON:0006241,4.24e-11,56;UBERON:0007135,4.24e-11,56;UBERON:0003075,7.27e-11,82;UBERON:0007284,7.27e-11,82;UBERON:0002346,2.28e-10,86;UBERON:0001016,8.28e-10,89;UBERON:0001896,1.30e-09,3;UBERON:0005290,1.30e-09,3;UBERON:0010096,1.30e-09,3;UBERON:0000988,1.41e-09,3;UBERON:0002240,1.54e-09,3;UBERON:0005174,1.54e-09,3;UBERON:0001137,1.54e-09,3;UBERON:0004733,3.01e-09,12;UBERON:0002028,3.01e-09,12;UBERON:0007277,3.01e-09,12;UBERON:0010371,1.34e-08,104;UBERON:0007023,6.48e-08,114;UBERON:0000073,9.09e-08,53;UBERON:0002616,9.09e-08,53;UBERON:0001017,1.11e-07,81;UBERON:0001781,1.31e-07,4;UBERON:0002784,2.04e-07,4;UBERON:0010314,8.73e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,1.81983059047828,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.92562821219883,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.332787154610557,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,4.28308260777463,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,1.42736439251347,0.328863867814245,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,1.23478652972711,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,1.03432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,1.81983059047828,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.92562821219883,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.332787154610557,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,4.28308260777463,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,1.42736439251347,0.328863867814245,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,1.23478652972711,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,1.03432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ADAT3 | |short_description=p3@ADAT3 | ||
}} | }} |
Latest revision as of 19:07, 16 September 2015
Short description: | p3@ADAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADAT3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000454697_5end |
EntrezGene: | ADAT3 |
HGNC: | 25151 |
UniProt: | C9JFC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.49e-07 | 4 |
breast cancer | 1.49e-07 | 4 |