FFCP PHASE1:Hg19::chr7:20370652..20370663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012,Q9BUG9 | |UniProt=P26012,Q9BUG9 | ||
|association_with_transcript=-61bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | |association_with_transcript=-61bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | ||
|cluster_id=chr7:20370652..20370663,+ | |||
|coexpression_cluster_id=C1537 | |coexpression_cluster_id=C1537 | ||
|description=CAGE_peak_12_at_ITGB8_5end | |description=CAGE_peak_12_at_ITGB8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000128;1.51e-07;7!CL:0000126;1.51e-07;7!CL:0000127;1.51e-07;7!CL:0002605;1.90e-07;3 | |ontology_enrichment_celltype_v019=CL:0000128;1.51e-07;7!CL:0000126;1.51e-07;7!CL:0000127;1.51e-07;7!CL:0002605;1.90e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.46e-07,3;CL:0000128,3.00e-07,7;CL:0000126,3.00e-07,7;CL:0000127,3.00e-07,7;CL:0002453,3.00e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.02e-07;3!UBERON:0003057;5.02e-07;3 | |ontology_enrichment_development_v019=UBERON:0006241;5.02e-07;3!UBERON:0003057;5.02e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;6.22e-21;34!UBERON:0002020;6.22e-21;34!UBERON:0002791;4.27e-20;32!UBERON:0001869;1.24e-19;32!UBERON:0001893;2.63e-19;34!UBERON:0000073;1.34e-18;53!UBERON:0002616;1.34e-18;53!UBERON:0002780;2.67e-18;41!UBERON:0001890;2.67e-18;41!UBERON:0000956;8.97e-15;25!UBERON:0000203;8.97e-15;25!UBERON:0001017;1.26e-12;75!UBERON:0001016;7.84e-12;83!UBERON:0000955;8.31e-12;68!UBERON:0002420;5.64e-11;9!UBERON:0000125;5.64e-11;9!UBERON:0007245;5.64e-11;9!UBERON:0002308;5.64e-11;9!UBERON:0010009;5.64e-11;9!UBERON:0010011;5.64e-11;9!UBERON:0000454;5.64e-11;9!UBERON:0000349;7.16e-11;5!UBERON:0004733;1.44e-10;12!UBERON:0002028;1.44e-10;12!UBERON:0002619;1.70e-10;22!UBERON:0004732;1.25e-09;13!UBERON:0002298;2.40e-09;6!UBERON:0001950;6.69e-08;20!UBERON:0001896;1.34e-07;3!UBERON:0005290;1.34e-07;3!UBERON:0009663;1.51e-07;7!UBERON:0002240;5.02e-07;3!UBERON:0005174;5.02e-07;3!UBERON:0001137;5.02e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003528;6.22e-21;34!UBERON:0002020;6.22e-21;34!UBERON:0002791;4.27e-20;32!UBERON:0001869;1.24e-19;32!UBERON:0001893;2.63e-19;34!UBERON:0000073;1.34e-18;53!UBERON:0002616;1.34e-18;53!UBERON:0002780;2.67e-18;41!UBERON:0001890;2.67e-18;41!UBERON:0000956;8.97e-15;25!UBERON:0000203;8.97e-15;25!UBERON:0001017;1.26e-12;75!UBERON:0001016;7.84e-12;83!UBERON:0000955;8.31e-12;68!UBERON:0002420;5.64e-11;9!UBERON:0000125;5.64e-11;9!UBERON:0007245;5.64e-11;9!UBERON:0002308;5.64e-11;9!UBERON:0010009;5.64e-11;9!UBERON:0010011;5.64e-11;9!UBERON:0000454;5.64e-11;9!UBERON:0000349;7.16e-11;5!UBERON:0004733;1.44e-10;12!UBERON:0002028;1.44e-10;12!UBERON:0002619;1.70e-10;22!UBERON:0004732;1.25e-09;13!UBERON:0002298;2.40e-09;6!UBERON:0001950;6.69e-08;20!UBERON:0001896;1.34e-07;3!UBERON:0005290;1.34e-07;3!UBERON:0009663;1.51e-07;7!UBERON:0002240;5.02e-07;3!UBERON:0005174;5.02e-07;3!UBERON:0001137;5.02e-07;3 | ||
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| ||
|short_description=p12@ITGB8 | |short_description=p12@ITGB8 | ||
}} | }} |
Latest revision as of 16:34, 17 September 2015
Short description: | p12@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITGB8_5end |
Coexpression cluster: | C1537_clear_endometrial_serous_Neural_Fibroblast_CD14_melanoma |
Association with transcript: | -61bp_to_ENST00000478974, NM_002214, uc003sut.2, uc003suu.2_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012Q9BUG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.46e-07 | 3 |
oligodendrocyte | 3.00e-07 | 7 |
macroglial cell | 3.00e-07 | 7 |
astrocyte | 3.00e-07 | 7 |
oligodendrocyte precursor cell | 3.00e-07 | 7 |