FFCP PHASE1:Hg19::chr17:48207486..48207541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201191 | |EntrezGene=201191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27312 | |HGNC=27312 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-240bp_to_ENST00000503131_5end | |association_with_transcript=-240bp_to_ENST00000503131_5end | ||
|cluster_id=chr17:48207486..48207541,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_SAMD14_5end | |description=CAGE_peak_1_at_SAMD14_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.62e-10!180;CL:0002139!7.06e-08!24;CL:0000115!9.00e-08!35;CL:0000222!2.21e-07!119 | |ontology_enrichment_celltype=CL:0000055!2.62e-10!180;CL:0002139!7.06e-08!24;CL:0000115!9.00e-08!35;CL:0000222!2.21e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.82e-08;24!CL:0000115;6.84e-07;36 | |ontology_enrichment_celltype_v019=CL:0002139;2.82e-08;24!CL:0000115;6.84e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.08e-08,24;CL:0000115,3.26e-08,36;CL:0000222,6.36e-07,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;5.09e-18;53!UBERON:0002616;5.09e-18;53!UBERON:0001893;9.92e-18;34!UBERON:0003528;1.25e-17;34!UBERON:0002020;1.25e-17;34!UBERON:0001869;1.62e-17;32!UBERON:0002791;2.42e-17;32!UBERON:0002780;3.47e-17;41!UBERON:0001890;3.47e-17;41!UBERON:0001017;5.19e-15;75!UBERON:0000956;9.92e-15;25!UBERON:0000203;9.92e-15;25!UBERON:0002619;1.94e-14;22!UBERON:0000955;2.05e-14;68!UBERON:0001950;4.01e-13;20!UBERON:0001016;4.70e-12;83!UBERON:0004733;1.73e-08;12!UBERON:0002028;1.73e-08;12!UBERON:0002420;2.43e-07;9!UBERON:0007245;2.43e-07;9!UBERON:0010009;2.43e-07;9!UBERON:0010011;2.43e-07;9!UBERON:0000454;2.43e-07;9!UBERON:0000125;2.53e-07;9!UBERON:0002308;2.53e-07;9!UBERON:0004732;2.83e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0000073;5.09e-18;53!UBERON:0002616;5.09e-18;53!UBERON:0001893;9.92e-18;34!UBERON:0003528;1.25e-17;34!UBERON:0002020;1.25e-17;34!UBERON:0001869;1.62e-17;32!UBERON:0002791;2.42e-17;32!UBERON:0002780;3.47e-17;41!UBERON:0001890;3.47e-17;41!UBERON:0001017;5.19e-15;75!UBERON:0000956;9.92e-15;25!UBERON:0000203;9.92e-15;25!UBERON:0002619;1.94e-14;22!UBERON:0000955;2.05e-14;68!UBERON:0001950;4.01e-13;20!UBERON:0001016;4.70e-12;83!UBERON:0004733;1.73e-08;12!UBERON:0002028;1.73e-08;12!UBERON:0002420;2.43e-07;9!UBERON:0007245;2.43e-07;9!UBERON:0010009;2.43e-07;9!UBERON:0010011;2.43e-07;9!UBERON:0000454;2.43e-07;9!UBERON:0000125;2.53e-07;9!UBERON:0002308;2.53e-07;9!UBERON:0004732;2.83e-07;13 | ||
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| ||
|short_description=p1@SAMD14 | |short_description=p1@SAMD14 | ||
}} | }} |
Latest revision as of 22:41, 15 September 2015
Short description: | p1@SAMD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAMD14_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -240bp_to_ENST00000503131_5end |
EntrezGene: | SAMD14 |
HGNC: | 27312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.08e-08 | 24 |
endothelial cell | 3.26e-08 | 36 |
mesodermal cell | 6.36e-07 | 121 |