FFCP PHASE1:Hg19::chr15:23932437..23932459,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7675 | |||
|TSSclassifier=strong | |||
|UniProt=Q99608 | |||
|association_with_transcript=0bp_to_ENST00000331837,NM_002487,uc001ywk.2_5end | |||
|cluster_id=chr15:23932437..23932459,- | |||
|coexpression_cluster_id=C3475 | |||
|description=CAGE_peak_1_at_NDN_5end | |||
|id=chr15:23932437..23932459,- | |||
|ontology_enrichment_celltype=CL:0000055!5.86e-17!180;CL:0000136!1.83e-09!15;CL:0000325!4.60e-09!39;CL:0000393!3.31e-08!60;CL:0000211!3.31e-08!60;CL:0000183!3.87e-08!59;CL:0000057!6.89e-08!75;CL:0000222!4.04e-07!119;CL:0000187!6.55e-07!54;CL:0000680!7.41e-07!57;CL:0000056!7.41e-07!57;CL:0000355!7.41e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.25e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.34e-09,15;CL:0000393,9.99e-09,61;CL:0000211,9.99e-09,61;CL:0000057,7.93e-08,76;CL:0000222,1.41e-07,121;CL:0000187,2.16e-07,55;CL:0000680,2.49e-07,58;CL:0000056,2.49e-07,58;CL:0000355,2.49e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.42e-19!86;UBERON:0007284!2.42e-19!86;UBERON:0002346!3.61e-19!90;UBERON:0000475!4.32e-19!365;UBERON:0000119!4.91e-17!312;UBERON:0003056!1.84e-16!61;UBERON:0000483!2.64e-16!309;UBERON:0005743!1.27e-15!86;UBERON:0000033!1.44e-14!123;UBERON:0001017!2.39e-14!82;UBERON:0000073!4.89e-14!94;UBERON:0001016!4.89e-14!94;UBERON:0000153!5.80e-14!129;UBERON:0007811!5.80e-14!129;UBERON:0000468!8.56e-14!659;UBERON:0000924!1.09e-13!173;UBERON:0006601!1.09e-13!173;UBERON:0004121!1.44e-13!169;UBERON:0001049!3.68e-13!57;UBERON:0005068!3.68e-13!57;UBERON:0006241!3.68e-13!57;UBERON:0007135!3.68e-13!57;UBERON:0002616!4.56e-13!59;UBERON:0007023!5.44e-12!115;UBERON:0000025!7.99e-12!194;UBERON:0000955!1.51e-11!69;UBERON:0006238!1.51e-11!69;UBERON:0000481!2.05e-11!347;UBERON:0003080!2.69e-11!42;UBERON:0002780!9.16e-11!41;UBERON:0001890!9.16e-11!41;UBERON:0006240!9.16e-11!41;UBERON:0000064!1.30e-10!219;UBERON:0004111!4.99e-10!241;UBERON:0000477!1.73e-09!286;UBERON:0001893!3.41e-09!34;UBERON:0000922!4.47e-09!612;UBERON:0001869!4.59e-09!32;UBERON:0000467!4.76e-09!625;UBERON:0002791!7.59e-09!33;UBERON:0002020!7.84e-09!34;UBERON:0003528!7.84e-09!34;UBERON:0000480!7.92e-09!626;UBERON:0002050!3.99e-08!605;UBERON:0005423!3.99e-08!605;UBERON:0000923!8.06e-08!604;UBERON:0005291!8.06e-08!604;UBERON:0006598!8.06e-08!604;UBERON:0002532!8.06e-08!604;UBERON:0000914!1.11e-07!83;UBERON:0002329!1.11e-07!83;UBERON:0003077!1.11e-07!83;UBERON:0003059!1.11e-07!83;UBERON:0007282!1.11e-07!83;UBERON:0009618!1.11e-07!83;UBERON:0007285!1.11e-07!83;UBERON:0005256!1.59e-07!143;UBERON:0002385!1.92e-07!63;UBERON:0001015!1.92e-07!63;UBERON:0000383!1.92e-07!63;UBERON:0001134!2.37e-07!61;UBERON:0002036!2.37e-07!61;UBERON:0003082!2.37e-07!61;UBERON:0000956!3.58e-07!25;UBERON:0000203!3.58e-07!25;UBERON:0002104!3.97e-07!21;UBERON:0000486!5.76e-07!82;UBERON:0000970!6.63e-07!20;UBERON:0004290!7.03e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.86e-08;32!UBERON:0002780;2.82e-08;41!UBERON:0001890;2.82e-08;41!UBERON:0002791;3.12e-08;32!UBERON:0001893;3.33e-08;34!UBERON:0003528;5.35e-08;34!UBERON:0002020;5.35e-08;34!UBERON:0000073;1.20e-07;53!UBERON:0002616;1.20e-07;53!UBERON:0002104;2.85e-07;21!UBERON:0000956;3.12e-07;25!UBERON:0000203;3.12e-07;25!UBERON:0000970;4.72e-07;20!UBERON:0001032;6.79e-07;24!UBERON:0004456;6.79e-07;24!UBERON:0001013;9.95e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.88e-20,132;UBERON:0003075,1.67e-19,82;UBERON:0007284,1.67e-19,82;UBERON:0002346,2.64e-19,86;UBERON:0000119,3.73e-17,309;UBERON:0003056,1.90e-16,61;UBERON:0000483,2.05e-16,306;UBERON:0001017,2.85e-14,81;UBERON:0004121,6.23e-14,171;UBERON:0000924,6.23e-14,171;UBERON:0006601,6.23e-14,171;UBERON:0010371,1.30e-13,104;UBERON:0001049,7.87e-13,56;UBERON:0005068,7.87e-13,56;UBERON:0006241,7.87e-13,56;UBERON:0007135,7.87e-13,56;UBERON:0001016,8.20e-13,89;UBERON:0000073,1.52e-12,53;UBERON:0002616,1.52e-12,53;UBERON:0007023,8.58e-12,114;UBERON:0000955,1.96e-11,68;UBERON:0006238,1.96e-11,68;UBERON:0000025,2.66e-11,192;UBERON:0002780,6.36e-11,41;UBERON:0001890,6.36e-11,41;UBERON:0003080,6.36e-11,41;UBERON:0006240,6.36e-11,41;UBERON:0004111,6.01e-10,240;UBERON:0000922,2.23e-09,592;UBERON:0001893,2.52e-09,34;UBERON:0005423,3.20e-09,581;UBERON:0001869,3.41e-09,32;UBERON:0002050,5.62e-09,564;UBERON:0003528,5.88e-09,34;UBERON:0002020,5.88e-09,34;UBERON:0002791,8.76e-09,32;UBERON:0007503,1.29e-08,78;UBERON:0000923,1.48e-08,560;UBERON:0010316,1.48e-08,560;UBERON:0005291,1.48e-08,560;UBERON:0006598,1.48e-08,560;UBERON:0010317,1.48e-08,560;UBERON:0002532,1.48e-08,560;UBERON:0002385,6.29e-08,64;UBERON:0001015,6.29e-08,64;UBERON:0000383,6.29e-08,64;UBERON:0001134,7.75e-08,62;UBERON:0002036,7.75e-08,62;UBERON:0003082,7.75e-08,62;UBERON:0007524,7.92e-08,73;UBERON:0003077,1.33e-07,72;UBERON:0007285,1.33e-07,72;UBERON:0000486,1.75e-07,83;UBERON:0002329,2.50e-07,71;UBERON:0003059,2.50e-07,71;UBERON:0007282,2.50e-07,71;UBERON:0004290,2.50e-07,71;UBERON:0009618,2.50e-07,71;UBERON:0000970,2.82e-07,21;UBERON:0002104,2.82e-07,21;UBERON:0000956,2.86e-07,25;UBERON:0000203,2.86e-07,25;UBERON:0003104,3.57e-07,160;UBERON:0009142,3.57e-07,160;UBERON:0000020,6.62e-07,24;UBERON:0001032,6.62e-07,24;UBERON:0004456,6.62e-07,24;UBERON:0000019,8.35e-07,20;UBERON:0000047,8.35e-07,20;UBERON:0010312,8.35e-07,20;UBERON:0004088,8.35e-07,20;UBERON:0010230,8.35e-07,20;UBERON:0003072,8.35e-07,20;UBERON:0004128,8.35e-07,20;UBERON:0003071,8.35e-07,20;UBERON:0001456,9.21e-07,22;UBERON:0000479,9.79e-07,773;UBERON:0001013,9.91e-07,14 | |||
|phase1_expression=85.2071598778911,59.9481466894753,66.1076155210105,66.0483769130661,103.248012812703,79.3828056931335,98.7869524856411,89.0725021531832,122.496059625724,54.552933903335,128.395414906927,28.6158197490526,43.2577844294664,21.287812709128,25.8489953067774,9.41255205032485,11.4511960324556,8.76372108464848,4.87932798790507,75.3500875429942,64.6682191244282,65.8254915103984,41.7904541211343,33.8079829930024,35.1519390865448,0,0,0,0.393364276848904,0,1.08371286321253,2.75826367343678,6.92773613189975,4.80680213216824,0,0,15.8544237240817,1.10799081706375,0,0.434021741431704,3.80656306207871,4.85840499028469,5.40908692031792,0.436194716338694,0,0.485168122375632,0.464858073811369,0,0,0.863077176966451,0.256160706529101,0,0.344745680736619,0,0,0.752969358170419,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,1.05627643155971,0.637812899895131,0.209658645508376,0.561643155732475,0.901061357049038,0.48217676009124,1.99508920618874,1.79025009479181,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,2.24203425192614,18.1735018494803,0,0,0,0.334372990781356,0,0,0,0.557052284425868,0.589211814949674,0.443067789167242,0.812411591295047,1.0247305578054,0.390178042679635,5.75532666112866,1.65810010671509,2.31842468588042,0.14828656316206,0,0,1.58633079776593,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,34.1329612839546,41.5834533016254,68.6621957099758,35.0595977813029,30.5816125487893,62.428849672115,11.1340032587154,43.3105034569346,46.7001996790495,50.1108438265395,40.2283318474517,30.7800827419625,9.4716774956061,20.763928795928,12.0082535652233,11.1443031871531,7.97747763113191,0.238490624305342,2.85997455390064,2.22874500797739,14.9071805525029,0.860234595106124,13.5384795626962,26.0041653285044,1.25849830862972,19.5333809777448,11.9127130925982,2.06733407335463,9.60568909254118,5.35552980423472,34.6433212713866,16.7259863258073,40.5143015529961,1.47065232138347,10.5318453224629,6.42958043645374,10.7774098860562,13.4007661775153,30.6633274931766,30.3765011061801,6.77846452542507,0,0,12.6467275121335,31.8062049085004,27.3521905195492,15.756692516773,16.6365240034312,15.2507404345294,42.6114976108153,23.4847790605351,35.7667945204882,37.6565352833717,22.3619715635682,18.6346569549343,56.7590353668493,42.6370184115199,44.2867506165876,2.80944069147288,5.13424639390004,2.98897361103602,24.7786792138344,27.3565275982142,35.5340540956689,4.08308342509786,24.5668634623536,6.50952421407322,26.1360628602052,17.8032189080561,58.2503271640337,37.3681433744444,35.8555922722161,32.1554596070948,4.71008996323111,23.7047915275652,15.017901994152,23.7376133072423,37.999781358607,23.1412630038632,36.3047560991565,40.9028569237954,18.9057390533173,29.2669183037166,29.3710215652017,23.6368407541119,18.7341728787806,38.4876170386735,39.3796687820819,38.2007079365542,49.9486315570129,17.7504796258307,26.6993060303247,38.4902544544807,7.34391242020528,9.00062197949754,2.86804595389004,11.0996072577932,14.5782745153634,23.8197582882513,41.4644220061482,16.9054970086671,19.7087773900948,1.56449532329816,11.5783368874719,15.1948413487729,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,33.9551509127338,33.658025712827,96.3083186515476,138.188188702409,0,0.982827216677626,11.8157981336281,0,0,42.0341135231388,6.14601598288303,1.1240175325762,1.50793458617446,30.8319522377904,61.5777697036514,51.9967392639789,63.5057904911202,52.1686822387846,33.6962952456808,26.8521592835597,17.1304639653346,18.8351610712252,0,0,6.15542515218493,4.68008530278475,10.5528125224997,12.185398418281,23.5174979478403,11.4837828766333,0,0,0.383382679165211,0,0.352193736052904,1.03664057770386,1.15295962733569,0.25248486685276,27.6850819113857,29.4131087679874,23.4434894420094,37.6359381249951,22.2107384239179,3.30377363628309,18.292891688357,46.1980067502886,44.9038870898279,29.408652614201,43.5645682103711,107.296933755565,34.657412854796,13.0309677126587,13.5209667984776,31.6365070342435,11.3479305618623,30.1057062288192,35.1725864399043,150.30618469343,46.9246991965038,33.5508269822547,50.4656567214415,44.349304884272,59.0821179036789,45.3197398472153,38.489601605092,0,1.00451418286425,10.5416969741516,9.82461907515489,19.5265290917994,7.13184525203592,17.6633194134447,16.2326294814803,20.592010772588,0,0.197030760201927,0,0,32.2700172762529,44.2475503115914,51.8103504561056,67.3415386644082,47.8454063739872,0,0,0,55.4565542570512,24.0081850108645,41.5035486260595,23.9166490760428,14.2743191037729,19.0819922191061,18.1569193238705,95.7008597134146,56.8518760139962,42.423959229927,8.63493278096067,31.1583894835478,24.5011792799994,54.0411194597164,62.1089597097649,0,0.215714200818617,0.853820462427555,43.9534978597076,1.66435439510497,54.4302527993425,53.343178681037,39.5931891083201,48.2735362424887,64.4539920756176,42.9834089216031,47.7736145796514,77.1773945513953,20.3556795819505,54.3338879458169,19.2998816632451,1.55776328755086,32.3064852118687,0,24.66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| |||
|short_description=p1@NDN | |||
}} |
Latest revision as of 00:01, 17 September 2015
Short description: | p1@NDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDN_5end |
Coexpression cluster: | C3475_skeletal_Mesenchymal_Alveolar_brain_Hepatic_Adipocyte_mature |
Association with transcript: | 0bp_to_ENST00000331837, NM_002487, uc001ywk.2_5end |
EntrezGene: | NDN |
HGNC: | 7675 |
UniProt: | Q99608 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.34e-09 | 15 |
electrically responsive cell | 9.99e-09 | 61 |
electrically active cell | 9.99e-09 | 61 |
fibroblast | 7.93e-08 | 76 |
mesodermal cell | 1.41e-07 | 121 |
muscle cell | 2.16e-07 | 55 |
muscle precursor cell | 2.49e-07 | 58 |
myoblast | 2.49e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.49e-07 | 58 |