FFCP PHASE1:Hg19::chr1:2005206..2005211,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |||
|TSSclassifier=strong | |||
|UniProt=D6RD31 | |||
|association_with_transcript=48bp_to_ENST00000495347_5end | |||
|cluster_id=chr1:2005206..2005211,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_PRKCZ_5end | |||
|id=chr1:2005206..2005211,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.22e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.53e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-12;82!UBERON:0006241;1.08e-10;3!UBERON:0006215;1.08e-10;3!UBERON:0003057;1.08e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.72e-80!82;UBERON:0001049!1.06e-76!57;UBERON:0005068!1.06e-76!57;UBERON:0006241!1.06e-76!57;UBERON:0007135!1.06e-76!57;UBERON:0005743!1.38e-75!86;UBERON:0000073!2.65e-67!94;UBERON:0001016!2.65e-67!94;UBERON:0002616!4.08e-66!59;UBERON:0000955!8.60e-64!69;UBERON:0006238!8.60e-64!69;UBERON:0001893!4.26e-58!34;UBERON:0002780!7.41e-58!41;UBERON:0001890!7.41e-58!41;UBERON:0006240!7.41e-58!41;UBERON:0002020!9.11e-58!34;UBERON:0003528!9.11e-58!34;UBERON:0003080!2.68e-56!42;UBERON:0002791!2.20e-55!33;UBERON:0003075!7.03e-55!86;UBERON:0007284!7.03e-55!86;UBERON:0001869!2.55e-53!32;UBERON:0002346!6.34e-52!90;UBERON:0002619!1.91e-46!22;UBERON:0001950!2.56e-41!20;UBERON:0000956!2.09e-40!25;UBERON:0000203!2.09e-40!25;UBERON:0007023!5.66e-39!115;UBERON:0003056!1.08e-38!61;UBERON:0004121!4.94e-35!169;UBERON:0000033!1.09e-34!123;UBERON:0000924!6.37e-34!173;UBERON:0006601!6.37e-34!173;UBERON:0000153!1.53e-32!129;UBERON:0007811!1.53e-32!129;UBERON:0003076!1.70e-20!15;UBERON:0003057!1.70e-20!15;UBERON:0002420!6.84e-19!9;UBERON:0007245!6.84e-19!9;UBERON:0010009!6.84e-19!9;UBERON:0010011!6.84e-19!9;UBERON:0000454!6.84e-19!9;UBERON:0002308!1.31e-18!9;UBERON:0000125!1.31e-18!9;UBERON:0000025!7.14e-18!194;UBERON:0000200!1.03e-17!6;UBERON:0004733!2.68e-17!12;UBERON:0002028!2.68e-17!12;UBERON:0007277!2.68e-17!12;UBERON:0002298!3.99e-16!8;UBERON:0004732!7.95e-16!13;UBERON:0000475!1.92e-15!365;UBERON:0002021!9.17e-15!5;UBERON:0000349!1.06e-14!5;UBERON:0009663!7.95e-14!7;UBERON:0004111!8.30e-14!241;UBERON:0001871!4.74e-13!7;UBERON:0000064!1.65e-12!219;UBERON:0000477!2.79e-11!286;UBERON:0000483!7.87e-11!309;UBERON:0002680!1.02e-10!9;UBERON:0001895!1.02e-10!9;UBERON:0010092!1.02e-10!9;UBERON:0000119!1.31e-10!312;UBERON:0002771!1.19e-09!3;UBERON:0001872!1.26e-09!5;UBERON:0000988!4.35e-09!3;UBERON:0001896!6.22e-09!3;UBERON:0005290!6.22e-09!3;UBERON:0010096!6.22e-09!3;UBERON:0006331!7.74e-09!3;UBERON:0000467!2.54e-07!625;UBERON:0000480!2.77e-07!626;UBERON:0000468!3.12e-07!659;UBERON:0000369!5.34e-07!4;UBERON:0002435!5.34e-07!4;UBERON:0000204!5.34e-07!4;UBERON:0010082!5.34e-07!4;UBERON:0001876!7.02e-07!2;UBERON:0001954!8.34e-07!2;UBERON:0003022!8.34e-07!2;UBERON:0002421!8.34e-07!2;UBERON:0002600!8.34e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.07e-44;22!UBERON:0001950;2.39e-41;20!UBERON:0001893;1.40e-40;34!UBERON:0001869;1.90e-40;32!UBERON:0000956;2.67e-39;25!UBERON:0000203;2.67e-39;25!UBERON:0003528;8.70e-39;34!UBERON:0002020;8.70e-39;34!UBERON:0002791;9.24e-37;32!UBERON:0000073;5.15e-24;53!UBERON:0002616;5.15e-24;53!UBERON:0001017;7.81e-24;75!UBERON:0002780;1.44e-23;41!UBERON:0001890;1.44e-23;41!UBERON:0000955;2.89e-21;68!UBERON:0000200;1.53e-20;6!UBERON:0001016;7.33e-18;83!UBERON:0001871;9.82e-18;6!UBERON:0002771;3.99e-16;2!UBERON:0002021;4.77e-14;5!UBERON:0000349;4.77e-14;5!UBERON:0002240;1.08e-10;3!UBERON:0005174;1.08e-10;3!UBERON:0001137;1.08e-10;3!UBERON:0004733;4.65e-10;12!UBERON:0002028;4.65e-10;12!UBERON:0004732;2.70e-09;13!UBERON:0002902;3.31e-09;1!UBERON:0009899;3.31e-09;1!UBERON:0002581;4.88e-09;1!UBERON:0002022;4.88e-09;1!UBERON:0003112;4.88e-09;1!UBERON:0011158;4.88e-09;1!UBERON:0007190;4.88e-09;1!UBERON:0003128;4.88e-09;1!UBERON:0001703;4.88e-09;1!UBERON:0002241;4.88e-09;1!UBERON:0007023;8.47e-09;114!UBERON:0001882;1.22e-08;1!UBERON:0001874;1.22e-08;1!UBERON:0005403;1.22e-08;1!UBERON:0011216;2.95e-08;132!UBERON:0000369;3.10e-08;4!UBERON:0002435;3.10e-08;4!UBERON:0000204;3.10e-08;4!UBERON:0002420;5.01e-08;9!UBERON:0007245;5.01e-08;9!UBERON:0010009;5.01e-08;9!UBERON:0010011;5.01e-08;9!UBERON:0000454;5.01e-08;9!UBERON:0002680;7.53e-08;9!UBERON:0000125;7.53e-08;9!UBERON:0002308;7.53e-08;9!UBERON:0001895;7.53e-08;9!UBERON:0001872;6.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.54e-56,81;UBERON:0001049,1.40e-53,56;UBERON:0005068,1.40e-53,56;UBERON:0006241,1.40e-53,56;UBERON:0007135,1.40e-53,56;UBERON:0001016,2.70e-50,89;UBERON:0001869,3.61e-48,32;UBERON:0000073,3.06e-46,53;UBERON:0002616,3.06e-46,53;UBERON:0001893,2.92e-45,34;UBERON:0003528,5.35e-45,34;UBERON:0002020,5.35e-45,34;UBERON:0002619,6.04e-45,22;UBERON:0002791,9.13e-42,32;UBERON:0001950,1.70e-41,20;UBERON:0000956,1.61e-39,25;UBERON:0000203,1.61e-39,25;UBERON:0000955,6.45e-39,68;UBERON:0006238,6.45e-39,68;UBERON:0002780,2.92e-37,41;UBERON:0001890,2.92e-37,41;UBERON:0003080,2.92e-37,41;UBERON:0006240,2.92e-37,41;UBERON:0003075,1.20e-35,82;UBERON:0007284,1.20e-35,82;UBERON:0002346,7.74e-34,86;UBERON:0007023,9.03e-28,114;UBERON:0010371,2.14e-27,104;UBERON:0004121,1.13e-24,171;UBERON:0000924,1.13e-24,171;UBERON:0006601,1.13e-24,171;UBERON:0003056,2.41e-24,61;UBERON:0010314,3.57e-23,132;UBERON:0000200,1.53e-20,6;UBERON:0011216,1.08e-19,223;UBERON:0001871,8.66e-18,6;UBERON:0003076,5.21e-17,15;UBERON:0003057,5.21e-17,15;UBERON:0002771,4.31e-16,2;UBERON:0000349,3.20e-14,5;UBERON:0002021,3.66e-14,5;UBERON:0000025,3.67e-13,192;UBERON:0002240,1.53e-10,3;UBERON:0005174,1.53e-10,3;UBERON:0001137,1.53e-10,3;UBERON:0004733,5.38e-10,12;UBERON:0002028,5.38e-10,12;UBERON:0007277,5.38e-10,12;UBERON:0004111,9.16e-10,240;UBERON:0004732,3.08e-09,13;UBERON:0002902,3.58e-09,1;UBERON:0009899,3.58e-09,1;UBERON:0002581,4.19e-09,1;UBERON:0003112,4.52e-09,1;UBERON:0011158,4.52e-09,1;UBERON:0003128,4.52e-09,1;UBERON:0001703,4.52e-09,1;UBERON:0002241,4.52e-09,1;UBERON:0004761,4.52e-09,1;UBERON:0009617,4.52e-09,1;UBERON:0002022,4.89e-09,1;UBERON:0007190,5.28e-09,1;UBERON:0001882,1.05e-08,1;UBERON:0005403,1.05e-08,1;UBERON:0001874,2.06e-08,1;UBERON:0000369,3.72e-08,4;UBERON:0002435,3.72e-08,4;UBERON:0000204,3.72e-08,4;UBERON:0010082,3.72e-08,4;UBERON:0002420,5.53e-08,9;UBERON:0007245,5.53e-08,9;UBERON:0010009,5.53e-08,9;UBERON:0010011,5.53e-08,9;UBERON:0000454,5.53e-08,9;UBERON:0002680,8.30e-08,9;UBERON:0001895,8.30e-08,9;UBERON:0010092,8.30e-08,9;UBERON:0000125,1.03e-07,9;UBERON:0002308,1.03e-07,9;UBERON:0001872,5.57e-07,5;UBERON:0000483,8.04e-07,306 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,1.43753037910592,1.47773809476774,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,2.36923270966296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.66078794705889,0.876336514945499,2.29363678276028,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,1.41696576325585,0.957803154342908,1.8460472781668,0.504143392443436,3.25039086581824,2.42213468447777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,0.781078098613847,0.826747186004736,1.52197944465376,0,0,0,0,0,0,0,0,0,0,0,0,0.951576261675644,2.43359262182542,0,0,0,1.25692471932802,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.430018749454354,0,2.7876510978275,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@PRKCZ | |||
}} |
Latest revision as of 16:13, 19 September 2015
Short description: | p13@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PRKCZ_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 48bp_to_ENST00000495347_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | D6RD31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.53e-09 | 8 |