FFCP PHASE1:Hg19::chr1:21606013..21606059,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1889 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3146 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000357071_5end | |||
|cluster_id=chr1:21606013..21606059,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_ECE1_5end | |||
|id=chr1:21606013..21606059,- | |||
|ontology_enrichment_celltype=CL:0002139!5.36e-21!24;CL:0000115!2.58e-20!35;CL:0000071!2.25e-16!18;CL:0002546!2.25e-16!18;CL:0002078!3.77e-15!44;CL:0000222!3.71e-14!119;CL:1000413!3.77e-09!9;CL:0000183!4.30e-08!59;CL:0000359!7.16e-08!32;CL:0000213!9.11e-08!57;CL:0000215!9.11e-08!57;CL:0000192!7.36e-07!42;CL:0000514!7.36e-07!42;CL:0000680!8.33e-07!57;CL:0000056!8.33e-07!57;CL:0000355!8.33e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.21e-26;24!CL:0000115;6.48e-22;36!CL:0000071;2.94e-20;18!CL:0002078;5.45e-13;45!CL:1000413;3.88e-11;9!CL:0000213;3.46e-08;58!CL:0000215;3.46e-08;58!CL:0002544;5.24e-08;6!CL:0002543;8.96e-08;6!CL:0000359;1.81e-07;32!CL:0002138;2.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.31e-26,24;CL:0000115,5.11e-26,36;CL:0000071,2.98e-20,18;CL:0002546,2.98e-20,18;CL:0002078,1.22e-19,45;CL:0000222,2.16e-14,121;CL:0000213,3.67e-12,58;CL:0000215,3.67e-12,58;CL:1000413,3.90e-11,9;CL:0002544,5.28e-08,6;CL:0002543,8.97e-08,6;CL:0000359,1.78e-07,32;CL:0005020,2.18e-07,6;CL:0002138,2.18e-07,6;CL:0005022,2.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.94e-20;18!CL:0005022;2.16e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.94e-20;18!UBERON:0001986;2.94e-20;18!UBERON:0004852;2.94e-20;18!UBERON:0000487;9.58e-17;22!UBERON:0000055;1.24e-15;65!UBERON:0001637;2.09e-14;42!UBERON:0003509;2.09e-14;42!UBERON:0004572;2.09e-14;42!UBERON:0002049;3.30e-14;75!UBERON:0007798;3.30e-14;75!UBERON:0007500;7.85e-14;56!UBERON:0001981;7.85e-14;56!UBERON:0004537;7.85e-14;56!UBERON:0006914;8.91e-14;25!UBERON:0003915;3.88e-11;9!UBERON:0004700;3.88e-11;9!UBERON:0001917;3.88e-11;9!UBERON:0004573;4.63e-11;33!UBERON:0004571;4.63e-11;33!UBERON:0000490;6.47e-10;33!UBERON:0001009;6.50e-10;112!UBERON:0004535;8.35e-10;109!UBERON:0003914;8.59e-10;74!UBERON:0007100;2.15e-09;25!UBERON:0007023;5.45e-09;114!UBERON:0002465;5.59e-09;10!UBERON:0001473;7.36e-08;8!UBERON:0004536;7.36e-08;8!UBERON:0006558;7.36e-08;8!UBERON:0000947;1.04e-07;21!UBERON:0010191;1.04e-07;21!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0000948;1.39e-07;22!UBERON:0001893;2.83e-07;34!UBERON:0003528;3.01e-07;34!UBERON:0002020;3.01e-07;34!UBERON:0000073;3.97e-07;53!UBERON:0002616;3.97e-07;53!UBERON:0001869;4.57e-07;32!UBERON:0002791;6.58e-07;32!UBERON:0001950;7.71e-07;20 | |||
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| |||
|short_description=p5@ECE1 | |||
}} |
Latest revision as of 02:47, 25 September 2015
Short description: | p5@ECE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ECE1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000357071_5end |
EntrezGene: | ECE1 |
HGNC: | 3146 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.31e-26 | 24 |
endothelial cell | 5.11e-26 | 36 |
blood vessel endothelial cell | 2.98e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-20 | 18 |
meso-epithelial cell | 1.22e-19 | 45 |
mesodermal cell | 2.16e-14 | 121 |
lining cell | 3.67e-12 | 58 |
barrier cell | 3.67e-12 | 58 |
endothelial cell of artery | 3.90e-11 | 9 |
aortic endothelial cell | 5.28e-08 | 6 |
vein endothelial cell | 8.97e-08 | 6 |
vascular associated smooth muscle cell | 1.78e-07 | 32 |
lymphangioblast | 2.18e-07 | 6 |
endothelial cell of lymphatic vessel | 2.18e-07 | 6 |
vascular lymphangioblast | 2.18e-07 | 6 |