FFCP PHASE1:Hg19::chr21:22370608..22370638,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4685 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7657 | |||
|TSSclassifier=strong | |||
|UniProt=O15394 | |||
|association_with_transcript=0bp_to_ENST00000400546,NM_004540,uc002yld.1,uc011acb.1_5end | |||
|cluster_id=chr21:22370608..22370638,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NCAM2_5end | |||
|id=chr21:22370608..22370638,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.55e-33!82;UBERON:0005743!3.25e-33!86;UBERON:0001049!4.70e-33!57;UBERON:0005068!4.70e-33!57;UBERON:0006241!4.70e-33!57;UBERON:0007135!4.70e-33!57;UBERON:0000073!1.15e-32!94;UBERON:0001016!1.15e-32!94;UBERON:0002616!1.91e-32!59;UBERON:0002346!3.92e-32!90;UBERON:0003075!4.51e-30!86;UBERON:0007284!4.51e-30!86;UBERON:0000955!4.28e-29!69;UBERON:0006238!4.28e-29!69;UBERON:0007023!8.56e-29!115;UBERON:0002780!2.59e-26!41;UBERON:0001890!2.59e-26!41;UBERON:0006240!2.59e-26!41;UBERON:0003080!4.13e-25!42;UBERON:0000924!6.03e-24!173;UBERON:0006601!6.03e-24!173;UBERON:0002020!1.55e-22!34;UBERON:0003528!1.55e-22!34;UBERON:0001893!1.56e-22!34;UBERON:0004121!3.12e-22!169;UBERON:0002791!9.00e-22!33;UBERON:0001869!2.96e-21!32;UBERON:0000033!2.67e-20!123;UBERON:0003056!7.51e-20!61;UBERON:0000153!1.61e-19!129;UBERON:0007811!1.61e-19!129;UBERON:0002619!1.64e-17!22;UBERON:0000956!2.11e-16!25;UBERON:0000203!2.11e-16!25;UBERON:0001950!4.91e-16!20;UBERON:0000025!2.03e-12!194;UBERON:0000475!2.96e-12!365;UBERON:0000477!1.69e-11!286;UBERON:0004111!1.11e-10!241;UBERON:0000481!2.15e-10!347;UBERON:0000119!2.64e-10!312;UBERON:0000483!2.88e-10!309;UBERON:0003076!5.29e-09!15;UBERON:0003057!5.29e-09!15;UBERON:0002420!8.97e-08!9;UBERON:0007245!8.97e-08!9;UBERON:0010009!8.97e-08!9;UBERON:0010011!8.97e-08!9;UBERON:0000454!8.97e-08!9;UBERON:0004732!1.10e-07!13;UBERON:0002308!1.30e-07!9;UBERON:0000125!1.30e-07!9;UBERON:0001871!4.37e-07!7;UBERON:0004733!4.72e-07!12;UBERON:0002028!4.72e-07!12;UBERON:0007277!4.72e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.71e-25;41!UBERON:0001890;1.71e-25;41!UBERON:0001893;4.37e-25;34!UBERON:0003528;4.60e-25;34!UBERON:0002020;4.60e-25;34!UBERON:0001869;6.12e-25;32!UBERON:0002791;7.90e-25;32!UBERON:0002619;7.94e-25;22!UBERON:0000073;1.42e-23;53!UBERON:0002616;1.42e-23;53!UBERON:0001950;1.12e-22;20!UBERON:0000956;8.56e-21;25!UBERON:0000203;8.56e-21;25!UBERON:0001017;1.57e-18;75!UBERON:0000955;2.09e-17;68!UBERON:0001016;1.14e-14;83!UBERON:0002420;1.30e-10;9!UBERON:0007245;1.30e-10;9!UBERON:0010009;1.30e-10;9!UBERON:0010011;1.30e-10;9!UBERON:0000454;1.30e-10;9!UBERON:0000125;2.20e-10;9!UBERON:0002308;2.20e-10;9!UBERON:0004732;9.21e-09;13!UBERON:0001871;1.39e-08;6!UBERON:0007023;2.19e-08;114!UBERON:0009663;2.25e-08;7!UBERON:0000200;5.25e-08;6!UBERON:0004733;7.10e-08;12!UBERON:0002028;7.10e-08;12!UBERON:0002298;2.46e-07;6!UBERON:0011216;2.68e-07;132!UBERON:0000349;4.39e-07;5!UBERON:0001894;5.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.83e-45,56;UBERON:0005068,5.83e-45,56;UBERON:0006241,5.83e-45,56;UBERON:0007135,5.83e-45,56;UBERON:0002346,1.27e-43,86;UBERON:0001017,3.93e-43,81;UBERON:0000073,6.71e-42,53;UBERON:0002616,6.71e-42,53;UBERON:0003075,1.23e-40,82;UBERON:0007284,1.23e-40,82;UBERON:0000955,1.35e-39,68;UBERON:0006238,1.35e-39,68;UBERON:0001016,2.13e-39,89;UBERON:0002780,3.50e-35,41;UBERON:0001890,3.50e-35,41;UBERON:0003080,3.50e-35,41;UBERON:0006240,3.50e-35,41;UBERON:0010371,3.46e-31,104;UBERON:0003528,1.18e-29,34;UBERON:0002020,1.18e-29,34;UBERON:0001893,1.19e-29,34;UBERON:0010314,1.47e-29,132;UBERON:0003056,3.93e-29,61;UBERON:0001869,8.58e-28,32;UBERON:0002791,1.28e-27,32;UBERON:0004121,1.80e-27,171;UBERON:0000924,1.80e-27,171;UBERON:0006601,1.80e-27,171;UBERON:0007023,1.62e-26,114;UBERON:0002619,8.21e-25,22;UBERON:0001950,1.17e-22,20;UBERON:0000956,8.78e-21,25;UBERON:0000203,8.78e-21,25;UBERON:0011216,5.12e-16,223;UBERON:0000025,6.80e-15,192;UBERON:0004111,7.54e-13,240;UBERON:0000483,4.19e-12,306;UBERON:0000119,1.10e-11,309;UBERON:0003076,9.46e-11,15;UBERON:0003057,9.46e-11,15;UBERON:0002420,1.29e-10,9;UBERON:0007245,1.29e-10,9;UBERON:0010009,1.29e-10,9;UBERON:0010011,1.29e-10,9;UBERON:0000454,1.29e-10,9;UBERON:0000125,2.21e-10,9;UBERON:0002308,2.21e-10,9;UBERON:0004732,6.96e-09,13;UBERON:0001871,1.38e-08,6;UBERON:0009663,2.20e-08,7;UBERON:0000200,5.35e-08,6;UBERON:0004733,5.37e-08,12;UBERON:0002028,5.37e-08,12;UBERON:0007277,5.37e-08,12;UBERON:0002050,1.89e-07,564;UBERON:0000923,2.13e-07,560;UBERON:0010316,2.13e-07,560;UBERON:0005291,2.13e-07,560;UBERON:0006598,2.13e-07,560;UBERON:0010317,2.13e-07,560;UBERON:0002532,2.13e-07,560;UBERON:0002298,2.58e-07,6;UBERON:0000349,4.36e-07,5;UBERON:0001894,6.98e-07,7;UBERON:0006222,6.98e-07,7 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0,0.872338524100369,0,0,0.783556884599516,0,0,0,0.263766978228454,0.37129905888014,1.65698687863958,0,0.602694528023977,1.46062018077475,0.975865597581014,0.738726348460727,0.204000691244253,1.88072832886853,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,1.2786256184353,0,0,0.144846518960824,0,0,4.15953195521899,3.32594096193846,4.91874799881506,5.10818394441079,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0.775250277507987,2.84613010149368,1.00416183829401,0,0,0,0,0,0.446498641420399,0.673588117878509,0.225222960966644,0,0,0.916008719652036,0,0,0,2.98183171017191,1.13967460498122,4.50191214764944,3.15520282823695,2.4826786753885,1.12135520028461,0,0.74000264525148,5.60179863719579,0.67355336034844,1.14423332179421,1.05950199351452,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0.587172493218824,0.323745888736263,0,2.04154171254893,1.47401180774122,2.37649296704261,1.18800285728205,0,0,1.43723628363248,0.505008341862199,0.625592599359821,0.554128230968366,0.877955241761676,0.30648779579902,0.751190294532984,1.02088964844019,0.358779271377724,0.427114777637135,0.635795703478686,0.300091096084402,0.721367704669072,0,0.930584281657949,0.337552664482532,0.292311015483596,0.757301322732344,0.828449087780694,1.61646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,2.57296375277154,0,1.39310378409594,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,1.54411029268673,0,0,0,0,0,0,0,2.08674728955138,8.33601729074334,0,0,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,2.92090313743978,1.90994212779139,2.34434894420094,1.71072446022705,1.7480673759565,0.600686115687835,5.71652865261156,0,0.87192013766656,0.5867062865676,2.97324946242889,0,0.845302752556,1.32969058292435,1.04007436911366,0,0,0,0.428933980974443,0.542621605391443,2.46972101034231,0.977208552881205,1.06617584622764,3.16780749173372,2.71295439353627,3.48613383440118,3.09916272664377,0,0,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,3.30323011489202,6.50699269288109,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0.736148950314839,0.500170521059677,0,0.623912584592421,0.178428988797162,0.473107245101804,0,0.902838299183157,0,0,0,0,0.434418072340414,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.512556597022804,0,1.93024705372329,0,1.3878872442239,3.01854933032316,3.12083192852475,1.03850885836724,1.39452454151951,0,0,0.0920809889358963,0.574072240823034,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0.976135183992909,1.03041011647722,0.366277859273374,0.907604499126468,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.767518373630648,0.551346289938122,4.94133126394059,1.16013355131383,0.681813019328807,1.33548053470106,0,0,0.127612712494584,0,0.929691098594572,2.83331112147576,0.6970372701606,0,0,2.60979897622522,0,0,2.97726695487734,1.89827654831236,6.67205678733387,0.511795582622668,1.28381696410176,1.27281299170375,0.78494864019923,3.23770423649967,4.66712950551293,2.82749765629647,0,0,1.68503382495592,0,0.487426979262569,0,0,3.81794666275024,2.26016233240486,1.10273068709225,1.99031692572366,0,1.73632660280006,1.31178950409327,0,0,0,1.72093622644862,1.67023369722306,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,1.03558180854457,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0.640944426764839,19.2495971052672,0.980160863924127,0,0,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0,0.403599414382095,4.68430861459359,0,15.9765197440398,24.1570196523809,18.3534055883099,0.19538809540204,1.11362469558097,0,3.51592382018778,0,0,0,0.879049075631364,29.4906067851318,0.111443384277478,0,0,0.296964680832639,0,59.6488588659779,36.2927094339123,1.66963057534359,0,0,1.19548792950642,0.552567831062295,0,0,1.10776324914963,2.17727711363265,0,0,0,1.28236427328014,0,0,19.3866549219044,23.3775607367865,17.9652418201075,1.30213880542617,11.3697999995054,0,0,1.01701460117107,0,1.37897349296586,3.79085997398231,0.173624994933292,8.85741385813839,16.6423085303063,7.62908681585416,6.96649337566715,6.2064999980245,25.2293206727068,0,0,1.53900517007594,0,0,0.0897576444097721,0.108647371922008,0,0.366390373607449,0,0,4.70940769185074,0.997270091400938,0,0.19606253431774,0.167821586975843,0.569261198172555,0.158936578980379,0.210998064528027,0,0,0,0,0.973033209536731,1.83309043480088,0,0,0.208843899010911,13.2106220642127,2.40773294189637,14.524395634971,0,0.782658475728359,0,0.394584402849391,3.62972148145992,8.57003732565372,1.51647791108371,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,7.05142733133628,0,0,0,2.03676934625681,6.61920950186252,2.03382666702479,0,0.397429223405979,42.8614088621299,0,0.721429382263803,0.640358984218058,0,0,0,0,0,0.248505071130865,0,0,0,0,1.44475294950759,16.8117680838741,15.8810239514712,0,0.859530882839914,0,3.6306712165393,1.14580212005842,0.717873024576814,1.59743200399193,0.858452096273142,2.90122894674434,1.5452198671947,2.88239906833923,0,0,0,0,0,0,36.5805657312279,19.88569729229,0.160753148465019,0.412618309791701,0.415440338029185,0,0,35.8422384282346,0,0.236417121897595,0.83927341015997,0.528001682597033,2.15144807199414,0,0.714695326373367,1.32418394073086,0.76280561296425,2.71499800876856,0,1.30634944043764,0,0.903017728242729,4.60047658820639,0,0,0,26.761571966841,15.0745165986667,0,0,4.48507132784318,1.72924735609633,2.07119527673598,0,0,0,0,0.544017803369474,0,0.612691153526923,2.62298104567844,0,27.4681135789766,38.9263785037262,21.4076491508115,10.3213655224213,13.3114861844223,12.3571841853353,0.138348634936231,0.124980407962107,0.606596470166591,0.285465333544967,0,0,0,0.597019211547496,2.10341978862502,1.10961172300523,1.7046270474758,4.0250864280412,7.11848977277229,0.915360273587694,4.08323494160745,1.70980920641059,0.887130899937803,0.796483835818512,0.449803112163605,0.931577741257556,0,4.51930914748591,1.5652351854352,1.20206087197775,3.04644169735036,1.62748293281865,0.363697318405119,1.18151612746737,0.464033759878494,1.19428766609585,0,3.09056134664514,1.34699795506368,0,0,0.857766365499703,0,0,2.31522474323834,0,2.14906609297785,1.23520578864389,1.53498834705095,0.530067437837643,0.771656153083659,0,0,0,0,20.6005069866079,0,0,0,0,0.245772908753719,0,0,0.320075189082423,0,0,0,0,0.622077260032973,0.383683113910955,0.862598491173454,0.786329709279482,0.327628914576042,4.41304577880466,1.06287460050841,5.20530209887809,6.14509409770568,0.318004350653419,0,0.80057074828547,1.41070377476274,0,29.8023604447572,18.420554922326,16.1230197647723,35.0748982851691,11.3432263299773,17.150998611126,21.7992121602999,15.704636228507,0.0981477185010256,0,0,0,1.1441462864015,0,0,0.526472298444801,0.20170506870352,0,0,0,0,29.784074816712,14.8404838736631,17.3616909060995,25.9370663693079,6.56369770821863,1.64477330057155,0.992422356778588,26.3806866539431,2.17196126987312,8.0355275381743,7.39824188881413,1.21393120847326,2.04895972216168,0.0887023701626388,0.345701962667338,0,20.4588896260263,20.915741992986,0,0.333694205676207,1.25588948560822,22.3104137680723,0,7.30526976407596,0,0,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.410651227424988,5.799072156691,2.4285549652957,0,0,0.475680363110274,0,0,0,0.540219106755613,0.655678681511872,0,1.71603825227734,0.235676547101626,19.2382297772646,16.9316448186439,15.2156061930024,0.339854229375634,0.469919589899268,1.03132620757723,0,2.85686301769052,0,0,0.730336388246517,0.458729283404541,12.7572229004792,0.473314686579554,25.2928343510203,13.0905207102113,3.7031878836078,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,5.22873017705852,4.01946195234268,15.7542193497168,18.6179392551411,1.27940389140589,4.52322419781107,0,0.186224142887574,0.224263725161227,0.318235791390825,1.41482032270754,0.653150243690884,0,0.26940821205835,0.502055437748735,3.65926392200615,0,0.640364075266293,0,0,4.69281884806909,0.488965776731466,6.51033885305182,0.665756774185513,0.402547587182052,0 | |||
|short_description=p2@NCAM2 | |||
}} |
Latest revision as of 21:09, 17 September 2015
Short description: | p2@NCAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCAM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000400546, NM_004540, uc002yld.1, uc011acb.1_5end |
EntrezGene: | NCAM2 |
HGNC: | 7657 |
UniProt: | O15394 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data