FFCP PHASE1:Hg19::chr9:139873495..139873543,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000492068_5end | |||
|cluster_id=chr9:139873495..139873543,+ | |||
|coexpression_cluster_id=C485 | |||
|description=CAGE_peak_3_at_PTGDS_5end | |||
|id=chr9:139873495..139873543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.29e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.86e-60!115;UBERON:0002616!4.23e-34!59;UBERON:0001049!1.23e-33!57;UBERON:0005068!1.23e-33!57;UBERON:0006241!1.23e-33!57;UBERON:0007135!1.23e-33!57;UBERON:0005743!4.36e-30!86;UBERON:0003075!1.38e-28!86;UBERON:0007284!1.38e-28!86;UBERON:0000955!1.66e-28!69;UBERON:0006238!1.66e-28!69;UBERON:0001017!2.17e-27!82;UBERON:0002780!2.76e-27!41;UBERON:0001890!2.76e-27!41;UBERON:0006240!2.76e-27!41;UBERON:0002346!4.88e-27!90;UBERON:0000073!2.76e-26!94;UBERON:0001016!2.76e-26!94;UBERON:0003080!2.89e-26!42;UBERON:0002020!1.06e-23!34;UBERON:0003528!1.06e-23!34;UBERON:0001893!1.49e-23!34;UBERON:0002791!8.12e-23!33;UBERON:0001869!9.77e-22!32;UBERON:0003056!1.81e-20!61;UBERON:0002619!2.03e-19!22;UBERON:0001950!9.72e-18!20;UBERON:0000153!1.55e-17!129;UBERON:0007811!1.55e-17!129;UBERON:0000033!5.37e-17!123;UBERON:0000956!4.51e-16!25;UBERON:0000203!4.51e-16!25;UBERON:0004121!1.40e-14!169;UBERON:0000924!4.33e-14!173;UBERON:0006601!4.33e-14!173;UBERON:0000475!6.08e-10!365;UBERON:0000064!1.65e-09!219;UBERON:0002420!2.65e-09!9;UBERON:0007245!2.65e-09!9;UBERON:0010009!2.65e-09!9;UBERON:0010011!2.65e-09!9;UBERON:0000454!2.65e-09!9;UBERON:0002308!2.78e-09!9;UBERON:0000125!2.78e-09!9;UBERON:0000062!2.97e-09!511;UBERON:0003076!1.76e-08!15;UBERON:0003057!1.76e-08!15;UBERON:0001871!4.40e-08!7;UBERON:0000468!4.62e-08!659;UBERON:0009663!1.57e-07!7;UBERON:0000477!4.69e-07!286;UBERON:0000483!5.54e-07!309;UBERON:0004732!6.60e-07!13;UBERON:0000481!9.05e-07!347;UBERON:0004111!9.99e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.12e-31;34!UBERON:0003528;7.80e-31;34!UBERON:0002020;7.80e-31;34!UBERON:0002791;1.90e-30;32!UBERON:0001869;3.13e-30;32!UBERON:0002780;3.12e-29;41!UBERON:0001890;3.12e-29;41!UBERON:0002619;4.88e-29;22!UBERON:0000073;9.67e-28;53!UBERON:0002616;9.67e-28;53!UBERON:0001950;1.82e-26;20!UBERON:0000956;8.59e-25;25!UBERON:0000203;8.59e-25;25!UBERON:0001017;1.62e-21;75!UBERON:0000955;3.77e-20;68!UBERON:0007023;1.31e-17;114!UBERON:0001016;7.19e-17;83!UBERON:0002420;2.05e-13;9!UBERON:0007245;2.05e-13;9!UBERON:0010009;2.05e-13;9!UBERON:0010011;2.05e-13;9!UBERON:0000454;2.05e-13;9!UBERON:0000125;2.14e-13;9!UBERON:0002308;2.14e-13;9!UBERON:0009663;1.03e-10;7!UBERON:0004732;1.29e-10;13!UBERON:0001871;1.68e-10;6!UBERON:0002298;1.22e-09;6!UBERON:0004733;3.24e-09;12!UBERON:0002028;3.24e-09;12!UBERON:0000200;7.89e-09;6!UBERON:0000349;6.36e-08;5!UBERON:0011216;1.33e-07;132!UBERON:0002021;1.80e-07;5!UBERON:0001872;2.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.49e-64,114;UBERON:0001049,1.15e-52,56;UBERON:0005068,1.15e-52,56;UBERON:0006241,1.15e-52,56;UBERON:0007135,1.15e-52,56;UBERON:0000073,2.20e-48,53;UBERON:0002616,2.20e-48,53;UBERON:0000955,1.05e-46,68;UBERON:0006238,1.05e-46,68;UBERON:0001017,1.56e-46,81;UBERON:0003075,5.29e-45,82;UBERON:0007284,5.29e-45,82;UBERON:0001016,4.73e-42,89;UBERON:0002346,4.87e-42,86;UBERON:0002780,2.08e-40,41;UBERON:0001890,2.08e-40,41;UBERON:0003080,2.08e-40,41;UBERON:0006240,2.08e-40,41;UBERON:0003528,1.50e-36,34;UBERON:0002020,1.50e-36,34;UBERON:0001893,2.52e-36,34;UBERON:0010371,3.44e-34,104;UBERON:0002791,7.79e-34,32;UBERON:0001869,1.65e-33,32;UBERON:0003056,1.15e-31,61;UBERON:0010314,2.55e-30,132;UBERON:0002619,5.54e-29,22;UBERON:0001950,2.14e-26,20;UBERON:0004121,3.20e-26,171;UBERON:0000924,3.20e-26,171;UBERON:0006601,3.20e-26,171;UBERON:0000956,9.58e-25,25;UBERON:0000203,9.58e-25,25;UBERON:0011216,3.79e-17,223;UBERON:0000025,5.14e-14,192;UBERON:0004111,9.33e-14,240;UBERON:0002420,1.95e-13,9;UBERON:0007245,1.95e-13,9;UBERON:0010009,1.95e-13,9;UBERON:0010011,1.95e-13,9;UBERON:0000454,1.95e-13,9;UBERON:0000125,2.10e-13,9;UBERON:0002308,2.10e-13,9;UBERON:0003076,5.18e-13,15;UBERON:0003057,5.18e-13,15;UBERON:0009663,1.00e-10,7;UBERON:0004732,1.45e-10,13;UBERON:0001871,1.84e-10,6;UBERON:0002298,1.27e-09,6;UBERON:0000483,1.59e-09,306;UBERON:0000119,3.04e-09,309;UBERON:0004733,3.64e-09,12;UBERON:0002028,3.64e-09,12;UBERON:0007277,3.64e-09,12;UBERON:0000200,8.77e-09,6;UBERON:0000349,6.16e-08,5;UBERON:0000923,1.65e-07,560;UBERON:0010316,1.65e-07,560;UBERON:0005291,1.65e-07,560;UBERON:0006598,1.65e-07,560;UBERON:0010317,1.65e-07,560;UBERON:0002532,1.65e-07,560;UBERON:0002021,1.75e-07,5;UBERON:0001872,2.94e-07,5;UBERON:0002050,2.94e-07,564 | |||
|phase1_expression=0,0.856402095563933,2.67813367782345,1.0007329835313,10.2801051718276,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.802320587350522,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,7.26933869012305,0,0,0,0,0.531831842075461,5.96226560763355,8.00792875092179,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,1.21085942115945,1.15235184896,0,0,0,0.298897361103602,0,0,0,0,0,0.309977343527296,0,0.741800787835671,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0.646584227275248,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,3.57656445851882,0,1.86156681609409,2.08014873822732,0,0,0,1.28680194292333,16.2786481617433,0,0,0,0,3.61727252471503,3.48613383440118,1.29964888536674,0,0,0,0,0,0,1.30303176000821,0.410952645100767,0.358121926479791,0,0.197030760201927,1.07813787429759,0.513372145118994,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0.234282829985426,0,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,36.0274129731443,41.8634977049244,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,1.12264037773229,2.94720043288112,0,1.44768529029247,2.96836132889982,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,1.02580050046556,1.64007322849853,4.55529752530024,1.23649213977267,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,4.46590043231601,1.58189712359363,3.24071329670502,0.511795582622668,1.71175595213568,0,0,0,0.274537029736055,0.824686816419805,0,0,0,0.48763373908959,0,0,0.136499911407986,0.989838023675989,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0,0.196498082026242,0,0,0,1.64647446479951,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,14.9122147164945,6.47079315488359,0,0,0,0.996239941255349,3.03912307084262,0,0,0,0.311039587661807,0,0,0,1.28236427328014,0,0,10.6626602070474,16.4199533746477,0,0,0,0,0,0,0,0,0,0,12.4003794013937,4.70326110639091,3.05163472634166,5.41838373663001,5.02430952221031,31.810882587326,0,0,10.1574341225012,8.31777007683109,0,0.0897576444097721,0,3.50901275705111,0.183195186803725,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,8.42514162258463,0,27.1746757041393,0,0,0,3.94584402849391,1.20990716048664,11.0186194186976,8.9093077276168,0,0,0,0,0,0,0,0,0,0,0,10.1341467580377,0,0,0,0,0.678923115418936,0,10.3951140759045,0,0,3.79864775735272,0,0.160317640503067,3.62870091056899,2.19790570540343,0,0,0,0,0.248505071130865,0,0,0,0,0,18.0126086612937,7.25598508127563,0,0,0,25.9732633183196,7.56229399238556,3.58936512288407,6.7890860169657,21.032076358692,12.0512587018611,1.47803639470798,0,0,0,0,0,0,0,7.95229689809303,6.26535668113248,0,0,0,0,0,3.28047605953333,0,0.86686278029118,0.157363764404994,0,0,0,35.020070992295,15.8902072887704,0,0,1.72844298240254,0.326587360109409,0,0,0,0,0,0,8.14482625077768,9.38851472373099,0,0,2.0289608387862,0.314408610199332,7.04206394090232,4.46549419630756,0,0,0,0,0,0.306345576763462,0,0,5.31640907980192,11.4704689007845,4.38168257472749,14.3352298922518,9.98361463831671,7.32737554708325,0,0,0,0,0,0,0,0,0.233713309847224,0,0,1.25783950876288,0.889811221596536,0,0.151230923763239,0,0,0,1.34940933649081,0.155262956876259,1.24411862352257,0.53168342911599,1.04349012362347,1.6528336989694,3.04644169735036,0,0,0.214821114084977,1.39210127963548,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83904526531058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,3.40414893011235,11.3357261060468,6.06608664417175,4.51256001329661,1.51243017733031,6.01668096438696,16.6319915000807,37.1200492673801,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,4.18733024634047,6.24862478891078,4.96048311602842,4.37569090337957,2.18789923607288,0,6.94695649745012,0,0,2.67850917939143,0.672567444437648,9.10448406354947,0,0.887023701626388,0,0,5.16569970623921,5.13027633790223,0,0,6.59341979944318,5.97039241680807,0,0,0,0,20.3708150903471,0,0,0,0,0,0,0,0,0,0,17.3588690578281,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,35.5318325478051,5.94092800654172,11.4117046447518,0,0.657887425858975,0.257831551894309,0,0,0,0,0,1.37618785021362,14.620637481448,0,10.334706509019,4.79985759374415,0.5290268405154,0,0,0,0,0,0,0,0,0,0,18.7173384599051,35.9071934409279,11.6083721524229,7.86090768550404,0.852935927603924,0.23806443146374,0.258355639344024,0.0620747142958579,0,0.0636471582781649,0.404234377916439,1.52401723527873,1.02669990325584,1.0776328482334,0.430333232356058,0,0,0,0,0,9.38563769613817,1.22241444182866,0.406896178315738,1.99727032255654,3.62292828463847,0 | |||
|short_description=p3@PTGDS | |||
}} |
Latest revision as of 14:36, 16 September 2015
Short description: | p3@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGDS_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | 0bp_to_ENST00000492068_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data