FFCP PHASE1:Hg19::chr10:129705299..129705386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:129705299..129705386,+ to FFCP PHASE1:Hg19::chr10:129705299..129705386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5791 | |EntrezGene=5791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |HGNC=9669 | ||
|TSSclassifier=strong | |||
|UniProt=P23469,Q5VWH4,Q96P81 | |UniProt=P23469,Q5VWH4,Q96P81 | ||
|association_with_transcript=0bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | |||
|cluster_id=chr10:129705299..129705386,+ | |||
|description=CAGE_peak_3_at_PTPRE_5end | |||
|id=chr10:129705299..129705386,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.26e-22!76;CL:0002194!1.80e-19!63;CL:0000576!1.80e-19!63;CL:0000040!1.80e-19!63;CL:0000559!1.80e-19!63;CL:0002057!9.76e-19!42;CL:0000557!3.00e-18!71;CL:0000839!3.05e-18!70;CL:0000860!5.53e-18!45;CL:0002009!1.21e-17!65;CL:0000115!1.71e-07!35;CL:0000763!2.46e-07!112;CL:0000049!2.46e-07!112;CL:0002139!6.14e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-14;33!CL:0002057;1.07e-14;33!CL:0000473;6.69e-14;39!CL:0000234;6.69e-14;39!CL:0000576;4.39e-12;48!CL:0000766;9.80e-11;69!CL:0002139;4.09e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.96e-23,72;CL:0000473,2.34e-21,48;CL:0000234,2.34e-21,48;CL:0002194,8.27e-21,59;CL:0000576,8.27e-21,59;CL:0000040,8.27e-21,59;CL:0000559,8.27e-21,59;CL:0000860,8.75e-20,42;CL:0002057,8.75e-20,42;CL:0000839,2.39e-19,66;CL:0000557,2.39e-19,67;CL:0002009,3.90e-19,61;CL:0000763,7.18e-09,108;CL:0000049,7.18e-09,108;CL:0000115,1.01e-07,36;CL:0002139,2.87e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.20e-25!115;UBERON:0001049!1.50e-23!57;UBERON:0005068!1.50e-23!57;UBERON:0006241!1.50e-23!57;UBERON:0007135!1.50e-23!57;UBERON:0000467!2.99e-22!625;UBERON:0000480!5.16e-22!626;UBERON:0001017!1.28e-21!82;UBERON:0005743!3.21e-21!86;UBERON:0000955!2.15e-20!69;UBERON:0006238!2.15e-20!69;UBERON:0003075!3.70e-20!86;UBERON:0007284!3.70e-20!86;UBERON:0002616!4.62e-20!59;UBERON:0000073!8.05e-20!94;UBERON:0001016!8.05e-20!94;UBERON:0003080!1.06e-19!42;UBERON:0002780!3.27e-19!41;UBERON:0001890!3.27e-19!41;UBERON:0006240!3.27e-19!41;UBERON:0000468!4.17e-19!659;UBERON:0002346!5.20e-18!90;UBERON:0001893!4.03e-17!34;UBERON:0002050!8.52e-17!605;UBERON:0005423!8.52e-17!605;UBERON:0002020!8.56e-17!34;UBERON:0003528!8.56e-17!34;UBERON:0000923!1.01e-16!604;UBERON:0005291!1.01e-16!604;UBERON:0006598!1.01e-16!604;UBERON:0002532!1.01e-16!604;UBERON:0002791!1.53e-16!33;UBERON:0000922!2.48e-16!612;UBERON:0001869!5.59e-16!32;UBERON:0003056!1.61e-15!61;UBERON:0002193!1.81e-15!112;UBERON:0000062!1.03e-14!511;UBERON:0002371!2.64e-14!80;UBERON:0002405!1.10e-13!115;UBERON:0002390!5.01e-13!102;UBERON:0003061!5.01e-13!102;UBERON:0000956!2.24e-12!25;UBERON:0000203!2.24e-12!25;UBERON:0002619!2.61e-12!22;UBERON:0000033!4.86e-12!123;UBERON:0000025!7.92e-12!194;UBERON:0001474!1.03e-11!86;UBERON:0000153!3.60e-11!129;UBERON:0007811!3.60e-11!129;UBERON:0001950!3.90e-11!20;UBERON:0004111!1.32e-10!241;UBERON:0004121!1.07e-09!169;UBERON:0000477!6.59e-09!286;UBERON:0000924!7.90e-09!173;UBERON:0006601!7.90e-09!173;UBERON:0004765!1.34e-08!101;UBERON:0001434!1.34e-08!101;UBERON:0003081!5.77e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.52e-15;34!UBERON:0001869;3.11e-15;32!UBERON:0002791;3.57e-15;32!UBERON:0003528;3.78e-15;34!UBERON:0002020;3.78e-15;34!UBERON:0002780;7.52e-15;41!UBERON:0001890;7.52e-15;41!UBERON:0000073;5.30e-13;53!UBERON:0002616;5.30e-13;53!UBERON:0000956;5.90e-13;25!UBERON:0000203;5.90e-13;25!UBERON:0002619;6.43e-13;22!UBERON:0001950;1.10e-11;20!UBERON:0001017;5.57e-10;75!UBERON:0000955;1.40e-09;68!UBERON:0001016;1.74e-08;83!UBERON:0007023;1.09e-07;114 | |||
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| ||
|short_description=p3@PTPRE | |||
}} | }} |
Latest revision as of 01:28, 17 September 2015
Short description: | p3@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254667, NM_006504, uc001lkb.2, uc009yat.2_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | P23469Q5VWH4Q96P81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.96e-23 | 72 |
defensive cell | 2.34e-21 | 48 |
phagocyte | 2.34e-21 | 48 |
monopoietic cell | 8.27e-21 | 59 |
monocyte | 8.27e-21 | 59 |
monoblast | 8.27e-21 | 59 |
promonocyte | 8.27e-21 | 59 |
classical monocyte | 8.75e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.75e-20 | 42 |
myeloid lineage restricted progenitor cell | 2.39e-19 | 66 |
granulocyte monocyte progenitor cell | 2.39e-19 | 67 |
macrophage dendritic cell progenitor | 3.90e-19 | 61 |
myeloid cell | 7.18e-09 | 108 |
common myeloid progenitor | 7.18e-09 | 108 |
endothelial cell | 1.01e-07 | 36 |
endothelial cell of vascular tree | 2.87e-07 | 24 |