FFCP PHASE1:Hg19::chr3:145968857..145968899,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:145968857..145968899,- to FFCP PHASE1:Hg19::chr3:145968857..145968899,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZR73,C9JNW2,C9J916 | |UniProt=Q6ZR73,C9JNW2,C9J916 | ||
|association_with_transcript=0bp_to_ENST00000433593,ENST00000460885,ENST00000476202_5end | |||
|cluster_id=chr3:145968857..145968899,- | |||
|coexpression_cluster_id=C4291 | |||
|description=CAGE_peak_1_at_PLSCR4_5end | |||
|id=chr3:145968857..145968899,- | |||
|ontology_enrichment_celltype=CL:0000222!6.00e-08!119;CL:0000055!9.71e-07!180;CL:0000057!9.88e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.09e-07,121;CL:0000057,3.42e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-33!115;UBERON:0000477!3.09e-27!286;UBERON:0004111!2.56e-23!241;UBERON:0000025!2.52e-19!194;UBERON:0000468!9.92e-19!659;UBERON:0000475!5.29e-16!365;UBERON:0002616!1.71e-15!59;UBERON:0001049!2.43e-15!57;UBERON:0005068!2.43e-15!57;UBERON:0006241!2.43e-15!57;UBERON:0007135!2.43e-15!57;UBERON:0000481!6.67e-15!347;UBERON:0000119!1.76e-14!312;UBERON:0000483!1.92e-14!309;UBERON:0000955!1.50e-13!69;UBERON:0006238!1.50e-13!69;UBERON:0000467!2.51e-13!625;UBERON:0000480!3.14e-13!626;UBERON:0001017!4.57e-13!82;UBERON:0005743!1.92e-12!86;UBERON:0004872!2.00e-12!84;UBERON:0002346!3.81e-12!90;UBERON:0003075!6.01e-12!86;UBERON:0007284!6.01e-12!86;UBERON:0003080!5.34e-11!42;UBERON:0000073!9.21e-11!94;UBERON:0001016!9.21e-11!94;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0002049!2.57e-10!79;UBERON:0007798!2.57e-10!79;UBERON:0001009!7.50e-10!113;UBERON:0000055!1.08e-09!69;UBERON:0000033!1.74e-09!123;UBERON:0004535!1.79e-09!110;UBERON:0000153!2.71e-09!129;UBERON:0007811!2.71e-09!129;UBERON:0000922!2.74e-09!612;UBERON:0002050!2.89e-09!605;UBERON:0005423!2.89e-09!605;UBERON:0003914!4.57e-09!118;UBERON:0002020!4.66e-09!34;UBERON:0003528!4.66e-09!34;UBERON:0000923!6.14e-09!604;UBERON:0005291!6.14e-09!604;UBERON:0006598!6.14e-09!604;UBERON:0002532!6.14e-09!604;UBERON:0001893!1.32e-08!34;UBERON:0002791!1.71e-08!33;UBERON:0000924!3.63e-08!173;UBERON:0006601!3.63e-08!173;UBERON:0007100!3.69e-08!27;UBERON:0000062!3.83e-08!511;UBERON:0001869!5.61e-08!32;UBERON:0004121!6.51e-08!169;UBERON:0000948!6.91e-08!24;UBERON:0005498!6.91e-08!24;UBERON:0004140!6.91e-08!24;UBERON:0009881!6.91e-08!24;UBERON:0004141!6.91e-08!24;UBERON:0003084!6.91e-08!24;UBERON:0007005!6.91e-08!24;UBERON:0004139!6.91e-08!24;UBERON:0004291!6.91e-08!24;UBERON:0001981!1.42e-07!60;UBERON:0007500!1.42e-07!60;UBERON:0004537!1.42e-07!60;UBERON:0006965!1.42e-07!60;UBERON:0000490!7.00e-07!138;UBERON:0002619!9.15e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.76e-09;114!UBERON:0002780;4.77e-08;41!UBERON:0001890;4.77e-08;41!UBERON:0007100;5.38e-08;25!UBERON:0000073;5.85e-08;53!UBERON:0002616;5.85e-08;53!UBERON:0003528;8.25e-08;34!UBERON:0002020;8.25e-08;34!UBERON:0000948;9.41e-08;22!UBERON:0001893;1.32e-07;34!UBERON:0002791;1.34e-07;32!UBERON:0001869;2.04e-07;32!UBERON:0001017;4.81e-07;75!UBERON:0002619;7.20e-07;22 | |||
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| ||
|short_description=p1@PLSCR4 | |||
}} | }} |
Latest revision as of 06:46, 25 September 2015
Short description: | p1@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLSCR4_5end |
Coexpression cluster: | C4291_pleomorphic_Cardiac_breast_aorta_lung_diaphragm_mesothelioma |
Association with transcript: | 0bp_to_ENST00000433593, ENST00000460885, ENST00000476202_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | Q6ZR73C9JNW2C9J916 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.09e-07 | 121 |
fibroblast | 3.42e-07 | 76 |