FFCP PHASE1:Hg19::chr6:163835816..163835848,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:163835816..163835848,+ to FFCP PHASE1:Hg19::chr6:163835816..163835848,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9444 | |EntrezGene=9444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21100 | |HGNC=21100 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PU8,Q8WY44 | |UniProt=Q96PU8,Q8WY44 | ||
|association_with_transcript=141bp_to_ENST00000275262,ENST00000361752,ENST00000392127,ENST00000453779,NM_006775,NM_206853,NM_206854,NM_206855,uc003que.2,uc003quf.2,uc003qug.2,uc003quh.2,uc003qui.2,uc003quj.2_5end | |||
|cluster_id=chr6:163835816..163835848,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_QKI_5end | |||
|id=chr6:163835816..163835848,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.79e-21!76;CL:0000557!4.35e-19!71;CL:0002057!4.64e-19!42;CL:0002009!6.57e-18!65;CL:0002194!2.77e-17!63;CL:0000576!2.77e-17!63;CL:0000040!2.77e-17!63;CL:0000559!2.77e-17!63;CL:0000839!5.61e-17!70;CL:0000860!1.14e-15!45;CL:0000763!3.72e-10!112;CL:0000049!3.72e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.73e-14;33!CL:0002057;2.73e-14;33!CL:0000473;5.47e-13;39!CL:0000234;5.47e-13;39!CL:0000576;7.37e-13;48!CL:0000766;2.26e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.46e-25,72;CL:0000557,6.81e-23,67;CL:0002009,8.85e-22,61;CL:0002194,3.81e-21,59;CL:0000576,3.81e-21,59;CL:0000040,3.81e-21,59;CL:0000559,3.81e-21,59;CL:0000839,1.57e-20,66;CL:0000473,4.45e-20,48;CL:0000234,4.45e-20,48;CL:0000860,4.39e-19,42;CL:0002057,4.39e-19,42;CL:0000763,5.70e-12,108;CL:0000049,5.70e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.67e-27!57;UBERON:0005068!2.67e-27!57;UBERON:0006241!2.67e-27!57;UBERON:0007135!2.67e-27!57;UBERON:0001017!1.47e-26!82;UBERON:0002616!1.08e-25!59;UBERON:0005743!3.60e-25!86;UBERON:0000955!4.90e-24!69;UBERON:0006238!4.90e-24!69;UBERON:0007023!1.25e-22!115;UBERON:0003075!3.79e-22!86;UBERON:0007284!3.79e-22!86;UBERON:0000073!4.41e-21!94;UBERON:0001016!4.41e-21!94;UBERON:0002346!8.70e-21!90;UBERON:0003080!1.05e-19!42;UBERON:0001893!1.60e-19!34;UBERON:0002020!1.63e-19!34;UBERON:0003528!1.63e-19!34;UBERON:0002780!1.65e-19!41;UBERON:0001890!1.65e-19!41;UBERON:0006240!1.65e-19!41;UBERON:0002791!7.17e-19!33;UBERON:0001869!3.78e-18!32;UBERON:0001474!7.46e-16!86;UBERON:0002371!1.79e-15!80;UBERON:0000033!4.67e-15!123;UBERON:0000153!1.34e-14!129;UBERON:0007811!1.34e-14!129;UBERON:0003056!1.85e-14!61;UBERON:0000956!7.67e-14!25;UBERON:0000203!7.67e-14!25;UBERON:0004765!1.02e-13!101;UBERON:0001434!1.02e-13!101;UBERON:0002405!1.37e-13!115;UBERON:0002619!2.25e-12!22;UBERON:0000468!3.94e-12!659;UBERON:0002193!7.53e-12!112;UBERON:0001950!3.29e-11!20;UBERON:0002390!4.27e-11!102;UBERON:0003061!4.27e-11!102;UBERON:0004121!4.74e-11!169;UBERON:0000467!8.54e-11!625;UBERON:0000924!1.36e-10!173;UBERON:0006601!1.36e-10!173;UBERON:0000480!1.82e-10!626;UBERON:0000062!5.06e-10!511;UBERON:0003076!9.33e-09!15;UBERON:0003057!9.33e-09!15;UBERON:0000479!1.85e-08!787;UBERON:0000922!2.03e-08!612;UBERON:0002050!2.93e-08!605;UBERON:0005423!2.93e-08!605;UBERON:0000923!3.32e-08!604;UBERON:0005291!3.32e-08!604;UBERON:0006598!3.32e-08!604;UBERON:0002532!3.32e-08!604;UBERON:0002204!4.12e-08!167;UBERON:0004732!1.57e-07!13;UBERON:0003081!1.91e-07!216;UBERON:0002308!3.25e-07!9;UBERON:0000125!3.25e-07!9;UBERON:0002420!5.29e-07!9;UBERON:0007245!5.29e-07!9;UBERON:0010009!5.29e-07!9;UBERON:0010011!5.29e-07!9;UBERON:0000454!5.29e-07!9;UBERON:0004733!7.21e-07!12;UBERON:0002028!7.21e-07!12;UBERON:0007277!7.21e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.82e-17;34!UBERON:0003528;7.55e-17;34!UBERON:0002020;7.55e-17;34!UBERON:0002791;1.32e-16;32!UBERON:0001869;1.43e-16;32!UBERON:0000073;6.62e-15;53!UBERON:0002616;6.62e-15;53!UBERON:0002780;2.23e-14;41!UBERON:0001890;2.23e-14;41!UBERON:0000956;5.92e-14;25!UBERON:0000203;5.92e-14;25!UBERON:0002619;1.80e-12;22!UBERON:0001017;4.36e-12;75!UBERON:0001950;2.68e-11;20!UBERON:0000955;4.82e-11;68!UBERON:0001016;2.87e-09;83!UBERON:0004732;1.43e-07;13!UBERON:0000125;2.98e-07;9!UBERON:0002308;2.98e-07;9!UBERON:0002420;4.89e-07;9!UBERON:0007245;4.89e-07;9!UBERON:0010009;4.89e-07;9!UBERON:0010011;4.89e-07;9!UBERON:0000454;4.89e-07;9!UBERON:0004733;6.61e-07;12!UBERON:0002028;6.61e-07;12 | |||
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| ||
|short_description=p5@QKI | |||
}} | }} |
Latest revision as of 18:28, 16 September 2015
Short description: | p5@QKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_QKI_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 141bp_to_ENST00000275262, ENST00000361752, ENST00000392127, ENST00000453779, NM_006775, NM_206853, NM_206854, NM_206855, uc003que.2, uc003quf.2, uc003qug.2, uc003quh.2, uc003qui.2, uc003quj.2_5end |
EntrezGene: | QKI |
HGNC: | 21100 |
UniProt: | Q96PU8Q8WY44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.46e-25 | 72 |
granulocyte monocyte progenitor cell | 6.81e-23 | 67 |
macrophage dendritic cell progenitor | 8.85e-22 | 61 |
monopoietic cell | 3.81e-21 | 59 |
monocyte | 3.81e-21 | 59 |
monoblast | 3.81e-21 | 59 |
promonocyte | 3.81e-21 | 59 |
myeloid lineage restricted progenitor cell | 1.57e-20 | 66 |
defensive cell | 4.45e-20 | 48 |
phagocyte | 4.45e-20 | 48 |
classical monocyte | 4.39e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.39e-19 | 42 |
myeloid cell | 5.70e-12 | 108 |
common myeloid progenitor | 5.70e-12 | 108 |