FFCP PHASE1:Hg19::chr11:133996267..133996289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83700 | |EntrezGene=83700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15532 | |HGNC=15532 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000524969_5end | |association_with_transcript=33bp_to_ENST00000524969_5end | ||
|cluster_id=chr11:133996267..133996289,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_JAM3_5end | |description=CAGE_peak_6_at_JAM3_5end | ||
|id=chr11:133996267..133996289,+ | |id=chr11:133996267..133996289,+ | ||
|ontology_enrichment_celltype=CL:0002543!6.16e-16!6;CL:0000071!1.17e-15!18;CL:0002546!1.17e-15!18;CL:0002139!2.84e-13!24;CL:0002618!2.51e-08!3;CL:0000115!3.05e-08!35;CL:1000413!4.48e-07!9 | |ontology_enrichment_celltype=CL:0002543!6.16e-16!6;CL:0000071!1.17e-15!18;CL:0002546!1.17e-15!18;CL:0002139!2.84e-13!24;CL:0002618!2.51e-08!3;CL:0000115!3.05e-08!35;CL:1000413!4.48e-07!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.41e-16;1!UBERON:0005425;1.41e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@JAM3 | |short_description=p6@JAM3 | ||
}} | }} |
Latest revision as of 20:24, 16 September 2015
Short description: | p6@JAM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_JAM3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 33bp_to_ENST00000524969_5end |
EntrezGene: | JAM3 |
HGNC: | 15532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data