FFCP PHASE1:Mm9::chr12:73320267..73320291,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:73320267..73320291,-|id=chr12:73320267..73320291,-|ontology_enrichment_celltype=CL:0000117!9.51e-22!23;CL:0000337!9.51e-22!23;CL:0000540!9.34e-15!33;CL:0000047!9.34e-15!33;CL:0000031!9.34e-15!33;CL:0000404!9.34e-15!33;CL:0000221!1.21e-14!44;CL:0000133!1.21e-14!44;CL:0002319!2.11e-14!43;CL:0000393!5.37e-11!39;CL:0000211!5.37e-11!39;CL:0000055!7.90e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-44,23;CL:0000337,3.55e-44,23;CL:0000540,6.02e-29,33;CL:0000047,6.02e-29,33;CL:0000031,6.02e-29,33;CL:0000404,6.02e-29,33;CL:0000393,1.45e-23,39;CL:0000211,1.45e-23,39;CL:0002319,8.41e-23,43;CL:0000221,3.84e-22,44;CL:0000133,3.84e-22,44;CL:0002609,8.47e-12,6;CL:0002321,1.18e-11,70;CL:0002612,7.28e-08,3;CL:0000723,1.25e-07,91;CL:0000048,1.25e-07,91;CL:0000120,1.46e-07,3;CL:0002613,5.13e-07,3;CL:0000034,8.21e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.55e-36!73;UBERON:0005743!7.55e-36!73;UBERON:0000073!2.64e-35!75;UBERON:0001016!2.64e-35!75;UBERON:0001049!6.01e-34!52;UBERON:0005068!6.01e-34!52;UBERON:0006241!6.01e-34!52;UBERON:0007135!6.01e-34!52;UBERON:0002346!8.57e-34!71;UBERON:0003075!8.57e-34!71;UBERON:0007284!8.57e-34!71;UBERON:0004121!1.16e-31!102;UBERON:0000924!1.16e-31!102;UBERON:0006601!1.16e-31!102;UBERON:0000955!1.84e-31!50;UBERON:0006238!1.84e-31!50;UBERON:0000033!1.00e-30!63;UBERON:0002616!1.21e-30!49;UBERON:0002020!2.18e-28!34;UBERON:0003056!8.04e-27!49;UBERON:0003080!1.82e-25!40;UBERON:0002780!9.81e-25!39;UBERON:0001890!9.81e-25!39;UBERON:0006240!9.81e-25!39;UBERON:0002791!2.81e-23!29;UBERON:0003528!2.81e-23!29;UBERON:0001893!2.81e-23!29;UBERON:0007811!4.56e-18!86;UBERON:0000956!1.99e-16!21;UBERON:0001869!1.99e-16!21;UBERON:0000203!1.99e-16!21;UBERON:0000153!6.09e-15!94;UBERON:0002619!5.05e-13!17;UBERON:0002021!3.28e-10!10;UBERON:0000411!3.28e-10!10;UBERON:0001950!3.28e-10!10;UBERON:0003076!1.15e-08!12;UBERON:0003057!1.15e-08!12;UBERON:0002420!5.64e-08!8;UBERON:0007245!5.64e-08!8;UBERON:0010009!5.64e-08!8;UBERON:0010011!5.64e-08!8;UBERON:0000454!5.64e-08!8;UBERON:0000025!1.36e-07!114;UBERON:0004111!6.22e-07!122;UBERON:0002240!6.72e-07!6;UBERON:0005174!6.72e-07!6;UBERON:0001137!6.72e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.90e-50,34;UBERON:0000073,8.94e-46,54;UBERON:0001017,3.62e-45,73;UBERON:0001016,1.00e-43,75;UBERON:0001049,4.40e-42,52;UBERON:0005068,4.40e-42,52;UBERON:0006241,4.40e-42,52;UBERON:0007135,4.40e-42,52;UBERON:0003528,1.61e-39,29;UBERON:0002791,1.61e-39,29;UBERON:0001893,1.61e-39,29;UBERON:0000955,9.49e-33,47;UBERON:0006238,9.49e-33,47;UBERON:0002346,1.23e-32,64;UBERON:0003075,1.23e-32,64;UBERON:0007284,1.23e-32,64;UBERON:0004121,1.25e-32,95;UBERON:0000924,1.25e-32,95;UBERON:0006601,1.25e-32,95;UBERON:0003080,1.05e-31,40;UBERON:0002616,2.71e-31,46;UBERON:0002780,2.60e-30,39;UBERON:0001890,2.60e-30,39;UBERON:0006240,2.60e-30,39;UBERON:0000956,2.49e-28,21;UBERON:0001869,2.49e-28,21;UBERON:0000203,2.49e-28,21;UBERON:0010371,1.37e-27,73;UBERON:0003056,1.27e-24,49;UBERON:0002619,2.60e-21,17;UBERON:0010314,3.57e-20,92;UBERON:0002021,1.86e-16,10;UBERON:0000411,1.86e-16,10;UBERON:0001950,1.86e-16,10;UBERON:0000025,1.12e-14,114;UBERON:0004111,3.57e-13,122;UBERON:0002240,8.34e-13,6;UBERON:0005174,8.34e-13,6;UBERON:0001137,8.34e-13,6;UBERON:0002420,6.54e-12,8;UBERON:0007245,6.54e-12,8;UBERON:0010009,6.54e-12,8;UBERON:0010011,6.54e-12,8;UBERON:0000454,6.54e-12,8;UBERON:0001948,1.79e-11,5;UBERON:0002315,1.79e-11,5;UBERON:0011216,2.80e-11,194;UBERON:0003076,3.36e-10,12;UBERON:0003057,3.36e-10,12;UBERON:0002950,5.08e-08,4;UBERON:0001891,5.08e-08,4;UBERON:0009616,5.08e-08,4;UBERON:0010286,5.08e-08,4;UBERON:0002257,7.28e-08,3;UBERON:0000369,6.37e-07,5;UBERON:0002435,6.37e-07,5;UBERON:0000204,6.37e-07,5;UBERON:0010082,6.37e-07,5;UBERON:0000483,8.50e-07,174;UBERON:0001954,9.63e-07,7;UBERON:0003022,9.63e-07,7;UBERON:0002421,9.63e-07,7;UBERON:0000349,9.63e-07,7;UBERON:0002600,9.63e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,6.87688273053643,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.8664130215526,6.61529097825284,1.47227472945967,2.57085885963423,3.75476519617743,1.34739879136449,2.49198224647415,3.67687514644008,1.10115880999389,2.42605942361857,3.99376986466233,2.1101806036831,10.7040543014819,2.08365348222704,3.90856198601933,1.12552522006336,2.90316670775939,4.71405736757868,7.54569908235246,4.28718725398191,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,1.04853447583376,0.915001205637253,2.26177833803156,2.60736480288415,1.27857728665165,2.70124457927428,0.811206315338788,0,0,0,0,0,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.640568601424249,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.9266070798535,0.820481806145422,0,0,0,0,0.646270193198397,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,5.06357760157895,4.58316410751517,3.43706364687375,1.37016503954128,4.5323633843382,2.02506750069542,4.5032120322422,0.906284817968409,4.14208249401456,0,0.399024873401031,0,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,0.476872379894642,0,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.749431733813838,0,0,0.191288332068843,0,0|short_description=p@chr12:73320267..73320291,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:73320267..73320291,- | |||
|id=chr12:73320267..73320291,- | |||
|ontology_enrichment_celltype=CL:0000117!9.51e-22!23;CL:0000337!9.51e-22!23;CL:0000540!9.34e-15!33;CL:0000047!9.34e-15!33;CL:0000031!9.34e-15!33;CL:0000404!9.34e-15!33;CL:0000221!1.21e-14!44;CL:0000133!1.21e-14!44;CL:0002319!2.11e-14!43;CL:0000393!5.37e-11!39;CL:0000211!5.37e-11!39;CL:0000055!7.90e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-44,23;CL:0000337,3.55e-44,23;CL:0000540,6.02e-29,33;CL:0000047,6.02e-29,33;CL:0000031,6.02e-29,33;CL:0000404,6.02e-29,33;CL:0000393,1.45e-23,39;CL:0000211,1.45e-23,39;CL:0002319,8.41e-23,43;CL:0000221,3.84e-22,44;CL:0000133,3.84e-22,44;CL:0002609,8.47e-12,6;CL:0002321,1.18e-11,70;CL:0002612,7.28e-08,3;CL:0000723,1.25e-07,91;CL:0000048,1.25e-07,91;CL:0000120,1.46e-07,3;CL:0002613,5.13e-07,3;CL:0000034,8.21e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.55e-36!73;UBERON:0005743!7.55e-36!73;UBERON:0000073!2.64e-35!75;UBERON:0001016!2.64e-35!75;UBERON:0001049!6.01e-34!52;UBERON:0005068!6.01e-34!52;UBERON:0006241!6.01e-34!52;UBERON:0007135!6.01e-34!52;UBERON:0002346!8.57e-34!71;UBERON:0003075!8.57e-34!71;UBERON:0007284!8.57e-34!71;UBERON:0004121!1.16e-31!102;UBERON:0000924!1.16e-31!102;UBERON:0006601!1.16e-31!102;UBERON:0000955!1.84e-31!50;UBERON:0006238!1.84e-31!50;UBERON:0000033!1.00e-30!63;UBERON:0002616!1.21e-30!49;UBERON:0002020!2.18e-28!34;UBERON:0003056!8.04e-27!49;UBERON:0003080!1.82e-25!40;UBERON:0002780!9.81e-25!39;UBERON:0001890!9.81e-25!39;UBERON:0006240!9.81e-25!39;UBERON:0002791!2.81e-23!29;UBERON:0003528!2.81e-23!29;UBERON:0001893!2.81e-23!29;UBERON:0007811!4.56e-18!86;UBERON:0000956!1.99e-16!21;UBERON:0001869!1.99e-16!21;UBERON:0000203!1.99e-16!21;UBERON:0000153!6.09e-15!94;UBERON:0002619!5.05e-13!17;UBERON:0002021!3.28e-10!10;UBERON:0000411!3.28e-10!10;UBERON:0001950!3.28e-10!10;UBERON:0003076!1.15e-08!12;UBERON:0003057!1.15e-08!12;UBERON:0002420!5.64e-08!8;UBERON:0007245!5.64e-08!8;UBERON:0010009!5.64e-08!8;UBERON:0010011!5.64e-08!8;UBERON:0000454!5.64e-08!8;UBERON:0000025!1.36e-07!114;UBERON:0004111!6.22e-07!122;UBERON:0002240!6.72e-07!6;UBERON:0005174!6.72e-07!6;UBERON:0001137!6.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.90e-50,34;UBERON:0000073,8.94e-46,54;UBERON:0001017,3.62e-45,73;UBERON:0001016,1.00e-43,75;UBERON:0001049,4.40e-42,52;UBERON:0005068,4.40e-42,52;UBERON:0006241,4.40e-42,52;UBERON:0007135,4.40e-42,52;UBERON:0003528,1.61e-39,29;UBERON:0002791,1.61e-39,29;UBERON:0001893,1.61e-39,29;UBERON:0000955,9.49e-33,47;UBERON:0006238,9.49e-33,47;UBERON:0002346,1.23e-32,64;UBERON:0003075,1.23e-32,64;UBERON:0007284,1.23e-32,64;UBERON:0004121,1.25e-32,95;UBERON:0000924,1.25e-32,95;UBERON:0006601,1.25e-32,95;UBERON:0003080,1.05e-31,40;UBERON:0002616,2.71e-31,46;UBERON:0002780,2.60e-30,39;UBERON:0001890,2.60e-30,39;UBERON:0006240,2.60e-30,39;UBERON:0000956,2.49e-28,21;UBERON:0001869,2.49e-28,21;UBERON:0000203,2.49e-28,21;UBERON:0010371,1.37e-27,73;UBERON:0003056,1.27e-24,49;UBERON:0002619,2.60e-21,17;UBERON:0010314,3.57e-20,92;UBERON:0002021,1.86e-16,10;UBERON:0000411,1.86e-16,10;UBERON:0001950,1.86e-16,10;UBERON:0000025,1.12e-14,114;UBERON:0004111,3.57e-13,122;UBERON:0002240,8.34e-13,6;UBERON:0005174,8.34e-13,6;UBERON:0001137,8.34e-13,6;UBERON:0002420,6.54e-12,8;UBERON:0007245,6.54e-12,8;UBERON:0010009,6.54e-12,8;UBERON:0010011,6.54e-12,8;UBERON:0000454,6.54e-12,8;UBERON:0001948,1.79e-11,5;UBERON:0002315,1.79e-11,5;UBERON:0011216,2.80e-11,194;UBERON:0003076,3.36e-10,12;UBERON:0003057,3.36e-10,12;UBERON:0002950,5.08e-08,4;UBERON:0001891,5.08e-08,4;UBERON:0009616,5.08e-08,4;UBERON:0010286,5.08e-08,4;UBERON:0002257,7.28e-08,3;UBERON:0000369,6.37e-07,5;UBERON:0002435,6.37e-07,5;UBERON:0000204,6.37e-07,5;UBERON:0010082,6.37e-07,5;UBERON:0000483,8.50e-07,174;UBERON:0001954,9.63e-07,7;UBERON:0003022,9.63e-07,7;UBERON:0002421,9.63e-07,7;UBERON:0000349,9.63e-07,7;UBERON:0002600,9.63e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,6.87688273053643,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.8664130215526,6.61529097825284,1.47227472945967,2.57085885963423,3.75476519617743,1.34739879136449,2.49198224647415,3.67687514644008,1.10115880999389,2.42605942361857,3.99376986466233,2.1101806036831,10.7040543014819,2.08365348222704,3.90856198601933,1.12552522006336,2.90316670775939,4.71405736757868,7.54569908235246,4.28718725398191,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,2.30391377494801,0,0,0,0,1.04853447583376,0.915001205637253,2.26177833803156,2.60736480288415,1.27857728665165,2.70124457927428,0.811206315338788,0,0,0,0,0,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.640568601424249,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.13195073617213,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.9266070798535,0.820481806145422,0,0,0,0,0.646270193198397,0,0,0,0,0.584511715822624,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,5.06357760157895,4.58316410751517,3.43706364687375,1.37016503954128,4.5323633843382,2.02506750069542,4.5032120322422,0.906284817968409,4.14208249401456,0,0.399024873401031,0,0.729320151204882,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.377252682772152,0.187283014939765,0.320125762024346,0.34461281373368,0,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,0.476872379894642,0,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.749431733813838,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr12:73320267..73320291,- | |||
}} |
Revision as of 23:07, 12 September 2013
Short description: | p@chr12:73320267..73320291, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:73320267..73320291, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.55e-44 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-44 | 23 |
neuron | 6.02e-29 | 33 |
neuronal stem cell | 6.02e-29 | 33 |
neuroblast | 6.02e-29 | 33 |
electrically signaling cell | 6.02e-29 | 33 |
electrically responsive cell | 1.45e-23 | 39 |
electrically active cell | 1.45e-23 | 39 |
neural cell | 8.41e-23 | 43 |
ectodermal cell | 3.84e-22 | 44 |
neurectodermal cell | 3.84e-22 | 44 |
neuron of cerebral cortex | 8.47e-12 | 6 |
embryonic cell | 1.18e-11 | 70 |
neuron of the ventral spinal cord | 7.28e-08 | 3 |
somatic stem cell | 1.25e-07 | 91 |
multi fate stem cell | 1.25e-07 | 91 |
granule cell | 1.46e-07 | 3 |
striatum neuron | 5.13e-07 | 3 |
stem cell | 8.21e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.