FFCP PHASE1:Hg19::chr17:982198..982256,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=81|TSSclassifier=W|UniProt=B7Z683|association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_5_at_ABR_5end|id=chr17:982198..982256,-|ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12|ontology_enrichment_celltype_v019=CL:0000333;1.65e-16;5!CL:0002605;7.63e-11;3!CL:0002319;1.53e-08;25!CL:0000047;4.30e-08;2|ontology_enrichment_celltype_v019_2=CL:0002605,7.52e-11,3;CL:0000047,8.49e-11,8;CL:0000133,1.32e-08,59;CL:0002319,1.60e-08,25|ontology_enrichment_development_v019=UBERON:0006601;4.42e-12;82!UBERON:0010122;1.96e-07;2|ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10|ontology_enrichment_disease_v019=DOID:169;1.07e-13;6!DOID:171;4.61e-08;10|ontology_enrichment_disease_v019_2=DOID:169,1.21e-13,6;DOID:171,4.93e-08,10|ontology_enrichment_uberon=UBERON:0000073!2.64e-63!94;UBERON:0001016!2.64e-63!94;UBERON:0001017!3.81e-63!82;UBERON:0005743!2.52e-59!86;UBERON:0001049!3.80e-51!57;UBERON:0005068!3.80e-51!57;UBERON:0006241!3.80e-51!57;UBERON:0007135!3.80e-51!57;UBERON:0002780!1.47e-49!41;UBERON:0001890!1.47e-49!41;UBERON:0006240!1.47e-49!41;UBERON:0003080!4.29e-48!42;UBERON:0000955!1.14e-47!69;UBERON:0006238!1.14e-47!69;UBERON:0001869!1.64e-46!32;UBERON:0002616!1.64e-46!59;UBERON:0001893!5.09e-46!34;UBERON:0002020!7.25e-46!34;UBERON:0003528!7.25e-46!34;UBERON:0002791!1.43e-44!33;UBERON:0002346!1.41e-42!90;UBERON:0003075!6.18e-42!86;UBERON:0007284!6.18e-42!86;UBERON:0003056!6.71e-39!61;UBERON:0000924!1.10e-38!173;UBERON:0006601!1.10e-38!173;UBERON:0004121!1.06e-37!169;UBERON:0000956!5.25e-36!25;UBERON:0000203!5.25e-36!25;UBERON:0002619!4.09e-31!22;UBERON:0000153!2.28e-30!129;UBERON:0007811!2.28e-30!129;UBERON:0000033!3.64e-29!123;UBERON:0001950!1.66e-28!20;UBERON:0007023!3.08e-25!115;UBERON:0000025!4.91e-16!194;UBERON:0000064!6.21e-15!219;UBERON:0001871!2.59e-13!7;UBERON:0000922!2.35e-12!612;UBERON:0002420!9.01e-12!9;UBERON:0007245!9.01e-12!9;UBERON:0010009!9.01e-12!9;UBERON:0010011!9.01e-12!9;UBERON:0000454!9.01e-12!9;UBERON:0004111!2.95e-11!241;UBERON:0002308!3.32e-11!9;UBERON:0000125!3.32e-11!9;UBERON:0000477!9.29e-11!286;UBERON:0000481!9.49e-11!347;UBERON:0000475!2.90e-10!365;UBERON:0000483!3.01e-10!309;UBERON:0002050!3.82e-10!605;UBERON:0005423!3.82e-10!605;UBERON:0000119!5.73e-10!312;UBERON:0000923!1.06e-09!604;UBERON:0005291!1.06e-09!604;UBERON:0006598!1.06e-09!604;UBERON:0002532!1.06e-09!604;UBERON:0000200!1.06e-09!6;UBERON:0000013!1.76e-09!5;UBERON:0002410!1.76e-09!5;UBERON:0000468!3.15e-09!659;UBERON:0009663!8.17e-09!7;UBERON:0000349!8.86e-09!5;UBERON:0002021!1.72e-08!5;UBERON:0000467!5.89e-08!625;UBERON:0000489!6.14e-08!32;UBERON:0000480!6.75e-08!626;UBERON:0000080!6.98e-08!18;UBERON:0002120!6.98e-08!18;UBERON:0004875!6.98e-08!18;UBERON:0005721!6.98e-08!18;UBERON:0005754!6.98e-08!18;UBERON:0007297!6.98e-08!18;UBERON:0000369!8.14e-08!4;UBERON:0002435!8.14e-08!4;UBERON:0000204!8.14e-08!4;UBERON:0010082!8.14e-08!4;UBERON:0000062!1.22e-07!511;UBERON:0002113!1.85e-07!27;UBERON:0003918!1.85e-07!27;UBERON:0005095!1.85e-07!27;UBERON:0007687!1.85e-07!27;UBERON:0009773!4.89e-07!12;UBERON:0001231!4.89e-07!12;UBERON:0004810!4.89e-07!12;UBERON:0006555!5.33e-07!17;UBERON:0005103!5.33e-07!17;UBERON:0000083!5.33e-07!17;UBERON:0009201!5.33e-07!17;UBERON:0004819!5.33e-07!17;UBERON:0006553!5.33e-07!17;UBERON:0003074!5.33e-07!17;UBERON:0003060!5.33e-07!17;UBERON:0004876!7.48e-07!20|ontology_enrichment_uberon_v019=UBERON:0001869;8.00e-57;32!UBERON:0002791;4.79e-54;32!UBERON:0001893;1.67e-51;34!UBERON:0003528;1.80e-48;34!UBERON:0002020;1.80e-48;34!UBERON:0000956;2.56e-48;25!UBERON:0000203;2.56e-48;25!UBERON:0002780;1.29e-43;41!UBERON:0001890;1.29e-43;41!UBERON:0002619;1.39e-39;22!UBERON:0001950;4.09e-39;20!UBERON:0000073;1.09e-26;53!UBERON:0002616;1.09e-26;53!UBERON:0000955;3.43e-25;68!UBERON:0001017;1.64e-24;75!UBERON:0001016;8.06e-22;83!UBERON:0001871;2.88e-21;6!UBERON:0002420;1.10e-16;9!UBERON:0007245;1.10e-16;9!UBERON:0010009;1.10e-16;9!UBERON:0010011;1.10e-16;9!UBERON:0000454;1.10e-16;9!UBERON:0000013;1.65e-16;5!UBERON:0002410;1.65e-16;5!UBERON:0000369;2.49e-13;4!UBERON:0002435;2.49e-13;4!UBERON:0000204;2.49e-13;4!UBERON:0000200;2.67e-12;6!UBERON:0009663;1.91e-11;7!UBERON:0011216;2.08e-11;132!UBERON:0005383;2.01e-10;3!UBERON:0005382;2.01e-10;3!UBERON:0002021;2.87e-10;5!UBERON:0000349;3.49e-10;5!UBERON:0000010;5.29e-09;8!UBERON:0000125;8.07e-09;9!UBERON:0002308;8.07e-09;9!UBERON:0000922;1.03e-07;49!UBERON:0001873;1.96e-07;2!UBERON:0001876;2.69e-07;2!UBERON:0002771;6.98e-07;2!UBERON:0000007;6.98e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.73e-65,89;UBERON:0001869,4.84e-63,32;UBERON:0002780,1.21e-59,41;UBERON:0001890,1.21e-59,41;UBERON:0003080,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |||
|TSSclassifier=W | |||
|UniProt=B7Z683 | |||
|association_with_transcript=0bp_to_ENST00000536794,uc010vqg.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_ABR_5end | |||
|id=chr17:982198..982256,- | |||
|ontology_enrichment_celltype=CL:0000047!1.75e-13!8;CL:0002319!1.02e-10!25;CL:0000133!3.04e-10!59;CL:0000540!4.08e-10!6;CL:0000031!4.08e-10!6;CL:0000404!4.08e-10!6;CL:0000221!1.85e-07!71;CL:1000507!4.89e-07!12;CL:1000494!4.89e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.65e-16;5!CL:0002605;7.63e-11;3!CL:0002319;1.53e-08;25!CL:0000047;4.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.52e-11,3;CL:0000047,8.49e-11,8;CL:0000133,1.32e-08,59;CL:0002319,1.60e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.42e-12;82!UBERON:0010122;1.96e-07;2 | |||
|ontology_enrichment_disease=DOID:169!8.86e-08!6;DOID:171!1.41e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.07e-13;6!DOID:171;4.61e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.21e-13,6;DOID:171,4.93e-08,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.492484232307152,0,0,8.87331560106276,15.1930611830901,12.4287213198855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.665188192387692,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66639931442677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.1633291240391,111.920274317555,54.1302168944387,69.3517338484204,56.7765488971315,0,0,0,0,0,0,0,0,0,0,0,0,4.1389228517002,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.385076685522074,0.784349769176855,5.84556898613043,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0.831076008928724,2.46262230194396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,2.95405774462077,0,0,0,0,1.38141957765574,15.1159648712566,0,0,0,0,0,0,0,0,0,5.81599647657131,1.39152147242777,69.864829300418,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,4.42870692906919,3.73848959738765,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,3.66618086960175,0,0,0,0.67401132980677,0,1.87411556580271,0,0,0,0,2.41981432097328,101.616156861323,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,3.98858014522036,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.684526894459965,0,0,0,0,0.229160424011684,0,0,0,0,1.94832070211506,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0.803765742325096,0.825236619583403,0.415440338029185,0,0,4.13096985274568,0,0.0788057072991982,1.73100140845494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.52893040697076,0,0,0,2.98688179689365,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,1.1267183763585,1.14681839138014,0.221858103073705,0.310482014706917,2.21357815897969,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6736622782191,84.7503017577919,25.791614464367,11.1393830955854,0,0,0.123935764259002,1.11728983594649,0,0,104.874768025397,0,0,4.752962657138,1.41696576325585,0.159633859057151,2.87162909937057,100.072463400022,2.48966108871184,1.45328081068666,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,2.09366512317023,0,0.826747186004736,2.40980078736846,91.3447931060427,0,0,0.527613733078862,0,0,0,1.82089681270989,2.04895972216168,0,0,0,0.0679697329768317,2.30204707469972,0,0,0,5.18481446722806,0,21.9158092922279,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.392600934460972,0,0,0,0,0.971421986118279,0,5.76957247967968,0,0,0,0.150962843566674,0.154348316215889,1.09279780251979,0,0,0,0.196308467114945,0,2.9585900930838,0,0,0,0,0,0,0,0.730336388246517,0,0,0,3.94350643107305,87.7064887584159,2.645134202577,0,0,0,0.504665699340316,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.310298987585686,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0.99798106963804,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p5@ABR | |||
}} |
Revision as of 16:47, 11 September 2013
Short description: | p5@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ABR_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000536794, uc010vqg.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | B7Z683 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.52e-11 | 3 |
neuronal stem cell | 8.49e-11 | 8 |
neurectodermal cell | 1.32e-08 | 59 |
neural cell | 1.60e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.21e-13 | 6 |
neuroectodermal tumor | 4.93e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.