FFCP PHASE1:Hg19::chrX:50557095..50557207,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57477 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29215 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULL8 | |||
|association_with_transcript=-51bp_to_ENST00000376020,NM_020717,NR_027121,uc004dpd.3,uc004dpe.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SHROOM4_5end | |||
|id=chrX:50557095..50557207,- | |||
|ontology_enrichment_celltype=CL:0002139!1.25e-13!24;CL:0000115!2.63e-11!35;CL:0000071!5.10e-11!18;CL:0002546!5.10e-11!18;CL:0002078!2.03e-09!44;CL:0000222!9.43e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.58e-16;24!CL:0000071;4.31e-13;18!CL:0000115;1.52e-12;36!CL:0002078;1.92e-08;45!CL:1000413;1.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.71e-16,24;CL:0000115,1.92e-14,36;CL:0000071,4.19e-13,18;CL:0002546,4.19e-13,18;CL:0002078,1.15e-12,45;CL:0000222,1.14e-08,121;CL:1000413,1.57e-07,9;CL:0000213,6.70e-07,58;CL:0000215,6.70e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;4.31e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@SHROOM4 | |||
}} |
Revision as of 12:11, 14 September 2013
Short description: | p1@SHROOM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SHROOM4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -51bp_to_ENST00000376020, NM_020717, NR_027121, uc004dpd.3, uc004dpe.2_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | Q9ULL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.71e-16 | 24 |
endothelial cell | 1.92e-14 | 36 |
blood vessel endothelial cell | 4.19e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.19e-13 | 18 |
meso-epithelial cell | 1.15e-12 | 45 |
mesodermal cell | 1.14e-08 | 121 |
endothelial cell of artery | 1.57e-07 | 9 |
lining cell | 6.70e-07 | 58 |
barrier cell | 6.70e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.