FFCP PHASE1:Hg19::chr10:129705299..129705386,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9669 | |||
|TSSclassifier=strong | |||
|UniProt=P23469,Q5VWH4,Q96P81 | |||
|association_with_transcript=0bp_to_ENST00000254667,NM_006504,uc001lkb.2,uc009yat.2_5end | |||
|description=CAGE_peak_3_at_PTPRE_5end | |||
|id=chr10:129705299..129705386,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.26e-22!76;CL:0002194!1.80e-19!63;CL:0000576!1.80e-19!63;CL:0000040!1.80e-19!63;CL:0000559!1.80e-19!63;CL:0002057!9.76e-19!42;CL:0000557!3.00e-18!71;CL:0000839!3.05e-18!70;CL:0000860!5.53e-18!45;CL:0002009!1.21e-17!65;CL:0000115!1.71e-07!35;CL:0000763!2.46e-07!112;CL:0000049!2.46e-07!112;CL:0002139!6.14e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-14;33!CL:0002057;1.07e-14;33!CL:0000473;6.69e-14;39!CL:0000234;6.69e-14;39!CL:0000576;4.39e-12;48!CL:0000766;9.80e-11;69!CL:0002139;4.09e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.96e-23,72;CL:0000473,2.34e-21,48;CL:0000234,2.34e-21,48;CL:0002194,8.27e-21,59;CL:0000576,8.27e-21,59;CL:0000040,8.27e-21,59;CL:0000559,8.27e-21,59;CL:0000860,8.75e-20,42;CL:0002057,8.75e-20,42;CL:0000839,2.39e-19,66;CL:0000557,2.39e-19,67;CL:0002009,3.90e-19,61;CL:0000763,7.18e-09,108;CL:0000049,7.18e-09,108;CL:0000115,1.01e-07,36;CL:0002139,2.87e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.20e-25!115;UBERON:0001049!1.50e-23!57;UBERON:0005068!1.50e-23!57;UBERON:0006241!1.50e-23!57;UBERON:0007135!1.50e-23!57;UBERON:0000467!2.99e-22!625;UBERON:0000480!5.16e-22!626;UBERON:0001017!1.28e-21!82;UBERON:0005743!3.21e-21!86;UBERON:0000955!2.15e-20!69;UBERON:0006238!2.15e-20!69;UBERON:0003075!3.70e-20!86;UBERON:0007284!3.70e-20!86;UBERON:0002616!4.62e-20!59;UBERON:0000073!8.05e-20!94;UBERON:0001016!8.05e-20!94;UBERON:0003080!1.06e-19!42;UBERON:0002780!3.27e-19!41;UBERON:0001890!3.27e-19!41;UBERON:0006240!3.27e-19!41;UBERON:0000468!4.17e-19!659;UBERON:0002346!5.20e-18!90;UBERON:0001893!4.03e-17!34;UBERON:0002050!8.52e-17!605;UBERON:0005423!8.52e-17!605;UBERON:0002020!8.56e-17!34;UBERON:0003528!8.56e-17!34;UBERON:0000923!1.01e-16!604;UBERON:0005291!1.01e-16!604;UBERON:0006598!1.01e-16!604;UBERON:0002532!1.01e-16!604;UBERON:0002791!1.53e-16!33;UBERON:0000922!2.48e-16!612;UBERON:0001869!5.59e-16!32;UBERON:0003056!1.61e-15!61;UBERON:0002193!1.81e-15!112;UBERON:0000062!1.03e-14!511;UBERON:0002371!2.64e-14!80;UBERON:0002405!1.10e-13!115;UBERON:0002390!5.01e-13!102;UBERON:0003061!5.01e-13!102;UBERON:0000956!2.24e-12!25;UBERON:0000203!2.24e-12!25;UBERON:0002619!2.61e-12!22;UBERON:0000033!4.86e-12!123;UBERON:0000025!7.92e-12!194;UBERON:0001474!1.03e-11!86;UBERON:0000153!3.60e-11!129;UBERON:0007811!3.60e-11!129;UBERON:0001950!3.90e-11!20;UBERON:0004111!1.32e-10!241;UBERON:0004121!1.07e-09!169;UBERON:0000477!6.59e-09!286;UBERON:0000924!7.90e-09!173;UBERON:0006601!7.90e-09!173;UBERON:0004765!1.34e-08!101;UBERON:0001434!1.34e-08!101;UBERON:0003081!5.77e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.52e-15;34!UBERON:0001869;3.11e-15;32!UBERON:0002791;3.57e-15;32!UBERON:0003528;3.78e-15;34!UBERON:0002020;3.78e-15;34!UBERON:0002780;7.52e-15;41!UBERON:0001890;7.52e-15;41!UBERON:0000073;5.30e-13;53!UBERON:0002616;5.30e-13;53!UBERON:0000956;5.90e-13;25!UBERON:0000203;5.90e-13;25!UBERON:0002619;6.43e-13;22!UBERON:0001950;1.10e-11;20!UBERON:0001017;5.57e-10;75!UBERON:0000955;1.40e-09;68!UBERON:0001016;1.74e-08;83!UBERON:0007023;1.09e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.37e-25,114;UBERON:0001049,7.82e-24,56;UBERON:0005068,7.82e-24,56;UBERON:0006241,7.82e-24,56;UBERON:0007135,7.82e-24,56;UBERON:0000073,5.47e-22,53;UBERON:0002616,5.47e-22,53;UBERON:0001017,3.31e-21,81;UBERON:0000955,2.61e-20,68;UBERON:0006238,2.61e-20,68;UBERON:0002780,2.74e-20,41;UBERON:0001890,2.74e-20,41;UBERON:0003080,2.74e-20,41;UBERON:0006240,2.74e-20,41;UBERON:0003075,4.93e-20,82;UBERON:0007284,4.93e-20,82;UBERON:0001016,5.43e-20,89;UBERON:0001893,4.53e-18,34;UBERON:0002346,6.72e-18,86;UBERON:0003528,1.01e-17,34;UBERON:0002020,1.01e-17,34;UBERON:0002050,1.39e-17,564;UBERON:0000923,3.64e-17,560;UBERON:0010316,3.64e-17,560;UBERON:0005291,3.64e-17,560;UBERON:0006598,3.64e-17,560;UBERON:0010317,3.64e-17,560;UBERON:0002532,3.64e-17,560;UBERON:0005423,3.90e-17,581;UBERON:0003056,5.58e-17,61;UBERON:0001869,7.40e-17,32;UBERON:0002791,9.18e-17,32;UBERON:0002193,1.13e-16,108;UBERON:0002405,2.09e-16,93;UBERON:0000922,1.08e-15,592;UBERON:0002371,1.95e-15,76;UBERON:0002390,4.72e-14,98;UBERON:0003061,4.72e-14,98;UBERON:0010314,2.70e-13,132;UBERON:0010371,2.84e-13,104;UBERON:0000956,4.91e-13,25;UBERON:0000203,4.91e-13,25;UBERON:0002619,5.78e-13,22;UBERON:0001474,6.03e-13,82;UBERON:0001950,1.02e-11,20;UBERON:0000025,3.57e-11,192;UBERON:0011216,7.17e-11,223;UBERON:0004765,1.04e-10,90;UBERON:0004111,1.08e-09,240;UBERON:0001434,3.12e-08,100;UBERON:0004121,5.57e-08,171;UBERON:0000924,5.57e-08,171;UBERON:0006601,5.57e-08,171;UBERON:0003081,6.91e-07,203 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0,0,2.53299878168311,0.631719873426831,0.522371256399677,5.40614660303319,11.8626198555313,1.31064823278103,1.58260186937072,0,0,0,0.602694528023977,0,0.487932798790507,0.492484232307152,0.612002073732759,1.56727360739044,4.57977579409691,7.52809337900863,5.77496142136093,1.60468152070698,0.656804715599566,1.65292640758726,4.72037132218685,5.75744097145819,14.3978994683951,0,1.8072355126695,1.10926203050036,0,0,0.880801318004542,26.0377842009982,20.4555336419545,27.1263588394815,2.68698569087909,3.88672399222775,6.43938919085466,14.1036291616178,21.1610528465733,24.9861583023451,13.7133131774354,10.6903650885675,14.2464930611748,10.9323109082417,11.7833925003386,12.0605937243178,20.6847408441971,18.719055823931,21.6682378550947,12.0475097307267,8.73299680185107,7.64059847113288,14.6920268338033,22.1441028682505,23.0161365287655,8.57613380485462,11.7683557996763,9.37694451171927,12.7692064996577,12.4824749432051,23.0444232128363,11.5574386018102,18.251902144707,17.8094852658196,7.87019353423379,15.4676607114777,17.7218936966895,11.8302960334687,14.457092397623,13.6278119580444,17.4109378277067,15.6183968555167,22.6623077242883,4.56020389985998,8.55341711956087,12.7864907635244,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.76171156811282,0.382273228125229,1.32171328579026,2.24203425192614,1.58030450865046,0.196709770113833,0,0.205601498999509,0,0,0,0,1.44833593950726,0.294605907474837,0.221533894583621,0,0.512365278902701,1.30059347559878,0.328875809207352,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0.318565414324097,0,0,1.6563263098555,0.639933055772092,1.24930726552346,1.18388626022008,0,0,0,0,12.1903433156981,2.68280343881454,0.767175371061182,0.361439152384566,1.00267582127178,0.724232594804119,6.36228757640879,5.35298357332899,9.45348171640679,18.4035399893928,18.1818006384771,7.13835961462534,0,0,4.54366351116557,4.35324343248168,4.91944453919801,10.0166062208244,13.1558829479429,15.2297575545122,6.75792185046797,6.881876760849,10.4142150482278,3.95715559346807,4.61449379830897,5.77747888074142,3.34391946458897,9.8198368484345,9.60568909254118,17.4054718637629,14.5018554159293,12.1643536914962,20.5012128340462,8.45625084795498,8.91156142669936,8.03697554556718,10.7774098860562,10.2476447239823,6.13266549863533,1.89853131913626,7.5112715011467,14.495845917967,7.75560528296651,0,4.47274756525787,0,0.662045904066094,0.286836620748814,0.354668382198357,0,1.06748995729705,6.66002380726332,1.55605517699883,4.17603083416033,1.14423332179421,2.57307626996383,0.576175924479999,0,0.624320153660641,2.2818872861778,1.04614076386261,0.23486899728753,0,0,1.02077085627447,0.122834317311768,1.44656093646072,0,0,4.55080680969013,6.46756327634615,0.168336113954066,0.500474079487857,1.93944880838928,0,0.30648779579902,1.35214253015937,0.680593098960126,1.07633781413317,0.213557388818567,1.69545520927649,0.900273288253207,1.44273540933814,2.06112432036503,0.18611685633159,0,0,0.252433774244115,0.276149695926898,0,0.355009592516614,0.201504196455281,0,6.57086900755209,5.72766853240753,1.14721838155602,0.243947412259191,0,0.232387885739037,0.829288440122964,0.504641701751257,0.36497735907583,1.56449532329816,0,1.38134921352481,0.464367928031979,0,1.18306800039844,1.68584690078102,1.68707720918437,1.43382164552112,0.435758888184812,2.84724742933316,0.808987848960987,0.588664395376038,0.769494313892781,6.64339909162183,14.0241773803446,2.057870056657,2.94017422771084,0,0,4.13552934676983,0,4.18160691046586,6.51957679134397,0.658501712451753,0,0.100528972411631,0,0,0,4.3299402607582,2.31860809950154,16.6720345814867,20.0669362387893,11.5746378144153,23.7817690293248,11.0628615714299,12.0188062693282,8.12516120088411,8.89216207529103,9.21513206190115,1.87467667973554,9.91094556373271,1.84307626415102,0.716468181622786,0.581267877027924,3.83382679165211,0.985326475791887,0.088048434013226,20.1108272074549,18.8797138976219,29.1620021214938,0.571481048629521,1.14596527667483,0,0,0,0.600686115687835,0,1.23344192779897,0.87192013766656,0.95339771567235,13.3149867230511,0,3.381211010224,1.32969058292435,1.04007436911366,0,0,0,3.57444984145369,0.542621605391443,2.46972101034231,2.60588947434988,3.55391948742546,3.16780749173372,0,0.871533458600294,1.19967589418468,13.378615870531,11.0496560115068,8.43335757932127,0,0,17.1164286048862,0.868687840005475,7.19167128926342,3.40215830155802,0,0.788123040807709,0.215627574859517,1.28343036279748,12.1965419626782,7.8083912314573,2.31986643833309,4.18790663335872,5.74144876487847,11.2351053592077,14.9580729602012,7.45947924184864,0,0,0,0,0,0,0,1.50473049863859,2.27407504055985,0,0,0.921845842708516,0.521301686808497,0.195801157462741,0,8.89102512328416,11.0014242417495,10.3525731069341,0,0,0,0,0.306923946576125,0.280660094433074,1.40953064181271,0.511707249066704,3.21707842287215,0,4.78050050788232,8.5229628150301,2.62806899244189,1.03850885836724,1.97557643381931,1.0877350463246,1.80455823272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| |||
|short_description=p3@PTPRE | |||
}} |
Revision as of 05:34, 11 January 2014
Short description: | p3@PTPRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254667, NM_006504, uc001lkb.2, uc009yat.2_5end |
EntrezGene: | PTPRE |
HGNC: | 9669 |
UniProt: | P23469Q5VWH4Q96P81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.96e-23 | 72 |
defensive cell | 2.34e-21 | 48 |
phagocyte | 2.34e-21 | 48 |
monopoietic cell | 8.27e-21 | 59 |
monocyte | 8.27e-21 | 59 |
monoblast | 8.27e-21 | 59 |
promonocyte | 8.27e-21 | 59 |
classical monocyte | 8.75e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.75e-20 | 42 |
myeloid lineage restricted progenitor cell | 2.39e-19 | 66 |
granulocyte monocyte progenitor cell | 2.39e-19 | 67 |
macrophage dendritic cell progenitor | 3.90e-19 | 61 |
myeloid cell | 7.18e-09 | 108 |
common myeloid progenitor | 7.18e-09 | 108 |
endothelial cell | 1.01e-07 | 36 |
endothelial cell of vascular tree | 2.87e-07 | 24 |