FFCP PHASE1:Hg19::chr19:42817450..42817493,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26912 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NBT3 | |||
|association_with_transcript=0bp_to_ENST00000301204,NM_173633,uc002otk.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_TMEM145_5end | |||
|id=chr19:42817450..42817493,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.60e-09;6!CL:0000404;9.60e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.38e-11,8;CL:0000540,8.53e-09,6;CL:0000031,8.53e-09,6;CL:0000404,8.53e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.73e-19;82!CL:0000031;9.60e-09;6!UBERON:0006215;5.61e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!6.22e-12!143;DOID:162!1.14e-08!235;DOID:14566!1.86e-08!239;DOID:305!1.07e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:171;6.56e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.50e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.52e-40!82;UBERON:0000073!3.70e-40!94;UBERON:0001016!3.70e-40!94;UBERON:0005743!2.25e-39!86;UBERON:0001049!4.29e-34!57;UBERON:0005068!4.29e-34!57;UBERON:0006241!4.29e-34!57;UBERON:0007135!4.29e-34!57;UBERON:0000955!8.92e-32!69;UBERON:0006238!8.92e-32!69;UBERON:0002346!1.14e-29!90;UBERON:0002616!3.42e-29!59;UBERON:0003075!1.37e-27!86;UBERON:0007284!1.37e-27!86;UBERON:0002780!1.10e-26!41;UBERON:0001890!1.10e-26!41;UBERON:0006240!1.10e-26!41;UBERON:0003080!1.38e-25!42;UBERON:0000924!1.85e-25!173;UBERON:0006601!1.85e-25!173;UBERON:0004121!1.17e-23!169;UBERON:0007023!5.61e-23!115;UBERON:0001893!1.28e-21!34;UBERON:0002020!1.29e-21!34;UBERON:0003528!1.29e-21!34;UBERON:0002791!7.39e-21!33;UBERON:0001869!2.61e-20!32;UBERON:0003056!1.27e-19!61;UBERON:0002619!1.27e-17!22;UBERON:0000033!7.60e-17!123;UBERON:0000153!7.66e-17!129;UBERON:0007811!7.66e-17!129;UBERON:0001950!2.87e-16!20;UBERON:0000956!3.39e-15!25;UBERON:0000203!3.39e-15!25;UBERON:0003076!1.56e-09!15;UBERON:0003057!1.56e-09!15;UBERON:0000025!2.69e-09!194;UBERON:0000481!6.31e-09!347;UBERON:0000064!3.05e-08!219;UBERON:0002420!3.56e-08!9;UBERON:0007245!3.56e-08!9;UBERON:0010009!3.56e-08!9;UBERON:0010011!3.56e-08!9;UBERON:0000454!3.56e-08!9;UBERON:0004732!3.83e-08!13;UBERON:0002308!5.68e-08!9;UBERON:0000125!5.68e-08!9;UBERON:0000922!8.94e-08!612;UBERON:0000477!1.38e-07!286;UBERON:0004733!1.86e-07!12;UBERON:0002028!1.86e-07!12;UBERON:0007277!1.86e-07!12;UBERON:0000483!2.11e-07!309;UBERON:0000475!2.23e-07!365;UBERON:0000119!5.16e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.79e-38;41!UBERON:0001890;4.79e-38;41!UBERON:0001893;1.50e-36;34!UBERON:0003528;4.06e-36;34!UBERON:0002020;4.06e-36;34!UBERON:0000073;4.24e-36;53!UBERON:0002616;4.24e-36;53!UBERON:0001869;6.33e-36;32!UBERON:0002791;1.05e-35;32!UBERON:0002619;7.47e-35;22!UBERON:0001950;4.03e-32;20!UBERON:0000956;6.23e-30;25!UBERON:0000203;6.23e-30;25!UBERON:0001017;2.22e-26;75!UBERON:0000955;2.36e-26;68!UBERON:0001016;1.65e-24;83!UBERON:0002420;7.21e-15;9!UBERON:0007245;7.21e-15;9!UBERON:0010009;7.21e-15;9!UBERON:0010011;7.21e-15;9!UBERON:0000454;7.21e-15;9!UBERON:0000125;1.64e-14;9!UBERON:0002308;1.64e-14;9!UBERON:0004732;2.50e-12;13!UBERON:0009663;1.06e-11;7!UBERON:0001894;1.36e-11;7!UBERON:0000200;4.88e-11;6!UBERON:0004733;5.31e-11;12!UBERON:0002028;5.31e-11;12!UBERON:0007023;9.30e-11;114!UBERON:0002298;3.69e-10;6!UBERON:0002021;3.90e-10;5!UBERON:0001872;1.19e-09;5!UBERON:0001871;1.26e-09;6!UBERON:0011216;1.65e-09;132!UBERON:0000349;6.51e-09;5!UBERON:0002784;1.16e-07;4!UBERON:0000369;1.26e-07;4!UBERON:0002435;1.26e-07;4!UBERON:0000204;1.26e-07;4!UBERON:0003296;1.83e-07;4!UBERON:0010133;1.83e-07;4!UBERON:0002680;3.18e-07;9!UBERON:0001895;3.18e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-72,89;UBERON:0001017,4.88e-72,81;UBERON:0001049,8.64e-68,56;UBERON:0005068,8.64e-68,56;UBERON:0006241,8.64e-68,56;UBERON:0007135,8.64e-68,56;UBERON:0000073,3.18e-63,53;UBERON:0002616,3.18e-63,53;UBERON:0000955,5.82e-57,68;UBERON:0006238,5.82e-57,68;UBERON:0002780,2.21e-53,41;UBERON:0001890,2.21e-53,41;UBERON:0003080,2.21e-53,41;UBERON:0006240,2.21e-53,41;UBERON:0002346,3.70e-53,86;UBERON:0003075,1.49e-50,82;UBERON:0007284,1.49e-50,82;UBERON:0001893,4.86e-43,34;UBERON:0003528,4.93e-43,34;UBERON:0002020,4.93e-43,34;UBERON:0003056,1.93e-41,61;UBERON:0004121,7.28e-41,171;UBERON:0000924,7.28e-41,171;UBERON:0006601,7.28e-41,171;UBERON:0010371,7.35e-41,104;UBERON:0001869,2.28e-40,32;UBERON:0002791,3.79e-40,32;UBERON:0002619,7.42e-35,22;UBERON:0001950,4.20e-32,20;UBERON:0011216,1.80e-31,223;UBERON:0007023,4.51e-31,114;UBERON:0000956,6.19e-30,25;UBERON:0000203,6.19e-30,25;UBERON:0010314,2.08e-27,132;UBERON:0003076,4.59e-15,15;UBERON:0003057,4.59e-15,15;UBERON:0002420,6.28e-15,9;UBERON:0007245,6.28e-15,9;UBERON:0010009,6.28e-15,9;UBERON:0010011,6.28e-15,9;UBERON:0000454,6.28e-15,9;UBERON:0000125,1.61e-14,9;UBERON:0002308,1.61e-14,9;UBERON:0000025,2.41e-14,192;UBERON:0004732,2.43e-12,13;UBERON:0009663,1.00e-11,7;UBERON:0001894,1.37e-11,7;UBERON:0006222,1.37e-11,7;UBERON:0004733,5.23e-11,12;UBERON:0002028,5.23e-11,12;UBERON:0007277,5.23e-11,12;UBERON:0000200,5.81e-11,6;UBERON:0002298,3.61e-10,6;UBERON:0002021,3.77e-10,5;UBERON:0004111,6.69e-10,240;UBERON:0001871,1.22e-09,6;UBERON:0001872,1.32e-09,5;UBERON:0000349,5.43e-09,5;UBERON:0002784,1.07e-07,4;UBERON:0000369,1.24e-07,4;UBERON:0002435,1.24e-07,4;UBERON:0000204,1.24e-07,4;UBERON:0010082,1.24e-07,4;UBERON:0000483,1.62e-07,306;UBERON:0003296,1.99e-07,4;UBERON:0010133,1.99e-07,4;UBERON:0000119,2.72e-07,309;UBERON:0002680,3.29e-07,9;UBERON:0001895,3.29e-07,9;UBERON:0010092,3.29e-07,9;UBERON:0000922,3.98e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.580969714347592,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0.118306800039844,0.168584690078102,1.20505514941741,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,1.32438929824395,0.737930631258681,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0.528290604079356,0,0,0,0.444485260045183,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.128343036279748,1.77866236955724,7.8083912314573,2.31986643833309,10.553524716064,7.01732626818479,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,4.81239927631679,0,0.185803175125719,0.28853842595289,0,1.11598390910176,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0.307240764308458,0,0.166849141711909,0,0.556812347790485,0,0,0,0,0.561421621224659,0,10.1942838269591,0,1.70481688083848,0,0,0,12.9239194209619,12.6602474769461,0,1.97764649072111,3.3780065300479,0.19924798825107,0.276283915531148,7.55798243562828,0,0.861593638227486,0,0.449341755736634,0.537063524026827,0.511572370226872,0,0,0,13.5706584453331,6.95760736213884,33.934345660203,0,0.699679999969566,0,0.341380344856499,0.254253650292766,0.236387681767936,5.51589397186343,3.2076507472158,10.070249706131,11.5146380155799,12.0596438625408,41.1970688056125,63.2513366806605,45.5143333188463,8.11725969469698,0.32681539055697,0,0.153900517007594,3.07643550786903,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0.676786981851542,0.19606253431774,0,0,0.158936578980379,0.210998064528027,0,0.282706142867882,0,0,0,0,1.77912677208373,0.988511511572023,1.35748534357092,6.20090423422229,0,7.26219781748551,0,0.586993856796269,0,0.394584402849391,0,22.9554571222868,0.695052375913368,0.300646838828985,0.829505531177977,1.99396161812156,2.31694369112849,1.2557316736289,3.58417289318877,0.284609546029793,2.77349346026277,0,0.0979923974143777,0.783532859223623,0,0.51595809741485,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,4.58931858795801,5.64951851951331,1.09633539717401,0.596143835108969,12.0923620275728,0.195551382734803,0.64127056201227,0.213452994739353,0,1.58499458869517,2.86341490414789,20.0766147498499,0.432164393964449,0.124252535565433,0,0,0.104602846312333,0.611989305817931,0.288950589901519,7.80546375322726,9.99409265911549,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0,2.39614800598789,0,0,0.0671834724867263,0,0,0.393915911536118,0.494495150286999,0.606631894687664,0.492137407573744,0,3.97614844904652,11.3048827072608,1.92903778158023,2.88832816854191,2.07720169014593,0,0,11.7246644349988,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0,1.77987976358325,0.542999601753713,0,0,0,0.164185041498678,0.681552087141687,1.58636928128176,0,0,8.01554329441613,8.46288651153216,0.513260513652988,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.157054096250234,7.08854543973589,12.0806002252944,14.522147961954,5.73409195690071,10.538259896001,7.32737554708325,6.08733993719416,0.249960815924213,0.303298235083296,1.99825733481477,0.235265819698172,5.1516839638757,4.92731497276806,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.385239660814607,0,0,0,0.463044948647668,0,0.179088841081487,0,0.657852148736121,0.176689145945881,0.192914038270915,0.168942440653073,0.76872455576384,0,0,12.0284839452006,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,6.65050730778989,5.60689019262745,0.943595651135378,10.4841252664333,0.509197589862076,4.25149840203366,1.61116493536703,0,0,0,7.20513673456923,0,0,8.67094538802204,15.5866233958143,14.6863150332579,16.2041927750196,27.727886584389,19.2948734375168,10.818868257334,8.56616521554926,0,1.1796972334774,0,0.693153996902029,0,0.690359926060101,0.397832444232549,0.0752103283492573,0.80682027481408,1.56302802246618,0,0.655087670040387,0,11.1437014620351,10.15401528198,13.8480153655793,10.2733612514129,22.425967169747,1.09651553371436,0,3.34155364283279,0.127762427639595,12.3211422252006,14.4602000554094,5.46269043812968,7.05752793189023,0,0.115233987555779,0,13.3900373964358,15.259283466581,1.89110145414349,0,0.156986185701028,9.58405098487612,0.280272163313789,4.56579360254748,1.07963795609311,0.47775168788705,3.4308741204795,6.95259891623997,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.62041277132864,0,0.223710863595585,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,4.67878926924211,17.7066189893618,11.1784885330914,0,8.57536030614347,10.8693247368005,0.231522474323834,1.09279780251979,10.3469805199535,0,8.01300260145528,7.45972175036792,5.34683520588755,17.7515405585028,0,0.281951753939561,0.45120521581504,0,0.357107877211315,0,0.802413666891683,0,0.458729283404541,6.16360207551241,0.157771562193185,15.3660767831467,22.6902358976996,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0,0,0,0,0.454672189309436,1.60778478093707,11.6083721524229,5.89568076412803,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.404234377916439,0.217716747896961,0.684466602170562,0,0.143444410785353,0,0.244209805832924,0.106727345877715,0,0.179650404213174,2.34640942403454,0.122241444182866,0,0,0,1.28227396921293 | |||
|short_description=p1@TMEM145 | |||
}} |
Revision as of 23:36, 20 January 2014
Short description: | p1@TMEM145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM145_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000301204, NM_173633, uc002otk.1_5end |
EntrezGene: | TMEM145 |
HGNC: | 26912 |
UniProt: | Q8NBT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.38e-11 | 8 |
neuron | 8.53e-09 | 6 |
neuroblast | 8.53e-09 | 6 |
electrically signaling cell | 8.53e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.50e-07 | 10 |