FFCP PHASE1:Hg19::chr2:233497885..233497894,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29556 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUP0 | |||
|association_with_transcript=-43bp_to_ENST00000264059_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_10_at_EFHD1_5end | |||
|id=chr2:233497885..233497894,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.31e-10!3;CL:0002575!2.76e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.16e-21;1!UBERON:0003056;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.61e-52!115;UBERON:0001049!5.80e-49!57;UBERON:0005068!5.80e-49!57;UBERON:0006241!5.80e-49!57;UBERON:0007135!5.80e-49!57;UBERON:0002616!6.41e-41!59;UBERON:0003080!1.37e-40!42;UBERON:0000955!1.46e-38!69;UBERON:0006238!1.46e-38!69;UBERON:0005743!3.23e-38!86;UBERON:0002780!3.85e-38!41;UBERON:0001890!3.85e-38!41;UBERON:0006240!3.85e-38!41;UBERON:0001017!4.61e-38!82;UBERON:0003075!3.36e-36!86;UBERON:0007284!3.36e-36!86;UBERON:0000073!4.17e-36!94;UBERON:0001016!4.17e-36!94;UBERON:0001893!3.74e-35!34;UBERON:0002346!3.41e-34!90;UBERON:0002791!6.54e-33!33;UBERON:0002020!6.65e-32!34;UBERON:0003528!6.65e-32!34;UBERON:0001869!3.69e-30!32;UBERON:0003056!2.50e-28!61;UBERON:0002308!2.69e-22!9;UBERON:0000125!2.69e-22!9;UBERON:0002420!3.09e-22!9;UBERON:0007245!3.09e-22!9;UBERON:0010009!3.09e-22!9;UBERON:0010011!3.09e-22!9;UBERON:0000454!3.09e-22!9;UBERON:0009663!3.66e-22!7;UBERON:0000033!4.21e-21!123;UBERON:0000153!1.00e-19!129;UBERON:0007811!1.00e-19!129;UBERON:0002619!1.77e-17!22;UBERON:0004121!2.73e-17!169;UBERON:0000924!1.12e-16!173;UBERON:0006601!1.12e-16!173;UBERON:0001950!3.59e-16!20;UBERON:0000956!3.90e-15!25;UBERON:0000203!3.90e-15!25;UBERON:0002298!9.03e-15!8;UBERON:0000200!5.14e-13!6;UBERON:0000369!7.77e-13!4;UBERON:0002435!7.77e-13!4;UBERON:0000204!7.77e-13!4;UBERON:0010082!7.77e-13!4;UBERON:0000476!1.31e-10!3;UBERON:0000920!1.31e-10!3;UBERON:0002771!2.39e-10!3;UBERON:0005383!2.80e-10!3;UBERON:0005382!2.80e-10!3;UBERON:0001871!7.33e-10!7;UBERON:0003076!1.16e-09!15;UBERON:0003057!1.16e-09!15;UBERON:0000025!1.46e-09!194;UBERON:0004732!1.18e-08!13;UBERON:0001897!6.25e-08!2;UBERON:0002950!6.68e-08!2;UBERON:0001891!6.68e-08!2;UBERON:0009616!6.68e-08!2;UBERON:0001875!7.62e-08!2;UBERON:0006514!7.62e-08!2;UBERON:0005162!8.41e-08!2;UBERON:0000122!8.41e-08!2;UBERON:0003124!1.34e-07!7;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2;UBERON:0000064!1.79e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.69e-21;1!UBERON:0009661;1.69e-21;1!UBERON:0002950;1.69e-21;1!UBERON:0001891;1.69e-21;1!UBERON:0000941;5.16e-21;1!UBERON:0001785;5.16e-21;1!UBERON:0002464;5.16e-21;1!UBERON:0004904;5.16e-21;1!UBERON:0001021;5.16e-21;1!UBERON:0000125;1.16e-20;9!UBERON:0002308;1.16e-20;9!UBERON:0004732;2.61e-14;13!UBERON:0000200;3.97e-14;6!UBERON:0002298;3.97e-14;6!UBERON:0000073;7.48e-13;53!UBERON:0002616;7.48e-13;53!UBERON:0009663;1.59e-12;7!UBERON:0001875;1.92e-11;2!UBERON:0006514;1.92e-11;2!UBERON:0001897;2.23e-11;2!UBERON:0010225;2.23e-11;2!UBERON:0002771;3.34e-11;2!UBERON:0002148;3.34e-11;2!UBERON:0003714;3.34e-11;2!UBERON:0002702;3.34e-11;2!UBERON:0005162;3.34e-11;2!UBERON:0000122;3.34e-11;2!UBERON:0006331;3.34e-11;2!UBERON:0009662;3.34e-11;2!UBERON:0003528;3.40e-10;34!UBERON:0002020;3.40e-10;34!UBERON:0002420;5.93e-10;9!UBERON:0007245;5.93e-10;9!UBERON:0010009;5.93e-10;9!UBERON:0010011;5.93e-10;9!UBERON:0000454;5.93e-10;9!UBERON:0002780;5.77e-09;41!UBERON:0001890;5.77e-09;41!UBERON:0000988;6.78e-08;3!UBERON:0001896;6.78e-08;3!UBERON:0001870;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3!UBERON:0005290;6.78e-08;3!UBERON:0002791;1.26e-07;32!UBERON:0004733;1.57e-07;12!UBERON:0002028;1.57e-07;12!UBERON:0001893;2.61e-07;34!UBERON:0000955;7.53e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.88e-21,1;UBERON:0009661,1.88e-21,1;UBERON:0002950,1.88e-21,1;UBERON:0001891,1.88e-21,1;UBERON:0009616,1.88e-21,1;UBERON:0010286,1.88e-21,1;UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0000125,1.33e-20,9;UBERON:0002308,1.33e-20,9;UBERON:0000073,8.75e-18,53;UBERON:0002616,8.75e-18,53;UBERON:0001049,7.69e-17,56;UBERON:0005068,7.69e-17,56;UBERON:0006241,7.69e-17,56;UBERON:0007135,7.69e-17,56;UBERON:0003075,5.78e-15,82;UBERON:0007284,5.78e-15,82;UBERON:0004732,2.38e-14,13;UBERON:0003528,2.80e-14,34;UBERON:0002020,2.80e-14,34;UBERON:0002346,2.91e-14,86;UBERON:0002298,3.71e-14,6;UBERON:0000200,5.17e-14,6;UBERON:0000955,1.12e-13,68;UBERON:0006238,1.12e-13,68;UBERON:0001016,1.81e-13,89;UBERON:0009663,1.59e-12,7;UBERON:0002780,5.50e-12,41;UBERON:0001890,5.50e-12,41;UBERON:0003080,5.50e-12,41;UBERON:0006240,5.50e-12,41;UBERON:0010371,9.31e-12,104;UBERON:0001017,1.68e-11,81;UBERON:0003056,1.75e-11,61;UBERON:0001875,1.82e-11,2;UBERON:0006514,1.82e-11,2;UBERON:0001897,2.23e-11,2;UBERON:0010225,2.23e-11,2;UBERON:0003714,3.02e-11,2;UBERON:0005162,3.02e-11,2;UBERON:0000122,3.02e-11,2;UBERON:0002771,3.70e-11,2;UBERON:0002148,4.09e-11,2;UBERON:0006331,4.09e-11,2;UBERON:0009662,4.09e-11,2;UBERON:0002702,4.52e-11,2;UBERON:0002791,5.22e-10,32;UBERON:0002420,5.93e-10,9;UBERON:0007245,5.93e-10,9;UBERON:0010009,5.93e-10,9;UBERON:0010011,5.93e-10,9;UBERON:0000454,5.93e-10,9;UBERON:0001893,1.86e-09,34;UBERON:0010314,3.38e-09,132;UBERON:0007023,2.58e-08,114;UBERON:0001896,5.54e-08,3;UBERON:0005290,5.54e-08,3;UBERON:0010096,5.54e-08,3;UBERON:0000920,5.93e-08,3;UBERON:0000988,7.76e-08,3;UBERON:0001870,8.29e-08,3;UBERON:0004733,1.52e-07,12;UBERON:0002028,1.52e-07,12;UBERON:0007277,1.52e-07,12;UBERON:0004121,6.44e-07,171;UBERON:0000924,6.44e-07,171;UBERON:0006601,6.44e-07,171 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0.638002319463839,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.69644523008381,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,1.1267183763585,0,1.77486482458964,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.957803154342908,0,0,0.691572524642179,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.760989722326882,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.543757863814654,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,3.01013124618048,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,2.27552590896169,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@EFHD1 | |||
}} |
Revision as of 09:14, 21 January 2014
Short description: | p10@EFHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EFHD1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -43bp_to_ENST00000264059_5end |
EntrezGene: | EFHD1 |
HGNC: | 29556 |
UniProt: | Q9BUP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.93e-08 | 3 |