FFCP PHASE1:Hg19::chrX:106692537..106692551,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C693|description=CAGE_peak_at_chrX:106692537..106692551,+|id=chrX:106692537..106692551,+|ontology_enrichment_celltype=CL:0002319!7.59e-07!25|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;5.05e-18;3!UBERON:0006241;1.23e-17;3!UBERON:0003057;1.23e-17;3!UBERON:0006601;1.64e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;1.81e-07;2!DOID:4236;1.81e-07;2|ontology_enrichment_disease_v019_2=DOID:154,1.75e-07,2;DOID:4236,1.75e-07,2|ontology_enrichment_uberon=UBERON:0001049!7.97e-56!57;UBERON:0005068!7.97e-56!57;UBERON:0006241!7.97e-56!57;UBERON:0007135!7.97e-56!57;UBERON:0005743!3.26e-53!86;UBERON:0001017!1.02e-51!82;UBERON:0000073!4.69e-49!94;UBERON:0001016!4.69e-49!94;UBERON:0000955!6.68e-45!69;UBERON:0006238!6.68e-45!69;UBERON:0002616!1.21e-44!59;UBERON:0003075!9.95e-43!86;UBERON:0007284!9.95e-43!86;UBERON:0007023!1.39e-40!115;UBERON:0002346!3.08e-40!90;UBERON:0002780!2.08e-31!41;UBERON:0001890!2.08e-31!41;UBERON:0006240!2.08e-31!41;UBERON:0003080!1.74e-30!42;UBERON:0002020!2.10e-30!34;UBERON:0003528!2.10e-30!34;UBERON:0001893!5.84e-30!34;UBERON:0003076!7.87e-29!15;UBERON:0003057!7.87e-29!15;UBERON:0002791!2.66e-28!33;UBERON:0000033!1.39e-26!123;UBERON:0001869!1.82e-26!32;UBERON:0000153!4.35e-26!129;UBERON:0007811!4.35e-26!129;UBERON:0004121!9.13e-26!169;UBERON:0003056!1.91e-25!61;UBERON:0000924!7.96e-25!173;UBERON:0006601!7.96e-25!173;UBERON:0004733!2.47e-22!12;UBERON:0002028!2.47e-22!12;UBERON:0007277!2.47e-22!12;UBERON:0004732!2.18e-20!13;UBERON:0000956!3.44e-20!25;UBERON:0000203!3.44e-20!25;UBERON:0002619!4.35e-18!22;UBERON:0002680!8.57e-16!9;UBERON:0001895!8.57e-16!9;UBERON:0010092!8.57e-16!9;UBERON:0001950!1.09e-14!20;UBERON:0002298!1.16e-14!8;UBERON:0002308!6.09e-12!9;UBERON:0000125!6.09e-12!9;UBERON:0000025!1.13e-11!194;UBERON:0002037!1.77e-09!6;UBERON:0006215!1.77e-09!6;UBERON:0000064!2.64e-09!219;UBERON:0000475!5.45e-09!365;UBERON:0000062!7.31e-09!511;UBERON:0004111!7.52e-09!241;UBERON:0000483!9.95e-09!309;UBERON:0002420!1.04e-08!9;UBERON:0007245!1.04e-08!9;UBERON:0010009!1.04e-08!9;UBERON:0010011!1.04e-08!9;UBERON:0000454!1.04e-08!9;UBERON:0000477!1.05e-08!286;UBERON:0000119!1.63e-08!312;UBERON:0000200!1.96e-08!6;UBERON:0001896!2.41e-08!3;UBERON:0005290!2.41e-08!3;UBERON:0010096!2.41e-08!3;UBERON:0000988!3.26e-08!3;UBERON:0002240!3.26e-08!3;UBERON:0006331!3.75e-08!3;UBERON:0009663!5.67e-08!7;UBERON:0000922!7.34e-08!612;UBERON:0000349!1.54e-07!5;UBERON:0001872!2.20e-07!5;UBERON:0000468!8.34e-07!659|ontology_enrichment_uberon_v019=UBERON:0002298;2.86e-73;6!UBERON:0004733;3.33e-65;12!UBERON:0002028;3.33e-65;12!UBERON:0004732;3.77e-60;13!UBERON:0001896;9.52e-38;3!UBERON:0005290;9.52e-38;3!UBERON:0000988;2.44e-37;3!UBERON:0002680;1.57e-34;9!UBERON:0001895;1.57e-34;9!UBERON:0002148;1.63e-25;2!UBERON:0006331;1.63e-25;2!UBERON:0009662;1.63e-25;2!UBERON:0000073;1.22e-19;53!UBERON:0002616;1.22e-19;53!UBERON:0002240;1.23e-17;3!UBERON:0005174;1.23e-17;3!UBERON:0001137;1.23e-17;3!UBERON:0001017;2.53e-13;75!UBERON:0000125;4.79e-13;9!UBERON:0002308;4.79e-13;9!UBERON:0000955;2.03e-11;68!UBERON:0001016;2.26e-11;83!UBERON:0003528;2.38e-11;34!UBERON:0002020;2.38e-11;34!UBERON:0000349;5.70e-11;5!UBERON:0002037;1.75e-09;6!UBERON:0001954;1.12e-07;2!UBERON:0001875;1.12e-07;2!UBERON:0003022;1.12e-07;2!UBERON:0002421;1.12e-07;2!UBERON:0006514;1.12e-07;2!UBERON:0002600;1.12e-07;2!UBERON:0001876;1.81e-07;2!UBERON:0001905;1.81e-07;2!UBERON:0002757;1.81e-07;2!UBERON:0010134;1.81e-07;2!UBERON:0005408;1.81e-07;2!UBERON:0001899;1.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.70e-81,15;UBERON:0003057,1.70e-81,15;UBERON:0002298,2.10e-73,6;UBERON:0004733,2.29e-65,12;UBERON:0002028,2.29e-65,12;UBERON:0007277,2.29e-65,12;UBERON:0004732,2.67e-60,13;UBERON:0001049,3.10e-47,56;UBERON:0005068,3.10e-47,56;UBERON:0006241,3.10e-47,56;UBERON:0007135,3.10e-47,56;UBERON:0001896,5.76e-38,3;UBERON:0005290,5.76e-38,3;UBERON:0010096,5.76e-38,3;UBERON:0000988,2.95e-37,3;UBERON:0000073,3.20e-37,53;UBERON:0002616,3.20e-37,53;UBERON:0002680,1.52e-34,9;UBERON:0001895,1.52e-34,9;UBERON:0010092,1.52e-34,9;UBERON:0001017,5.79e-32,81;UBERON:0003075,5.79e-32,82;UBERON:0007284,5.79e-32,82;UBERON:0002346,2.01e-30,86;UBERON:0001016,1.11e-28,89;UBERON:0000955,2.18e-28,68;UBERON:0006238,2.18e-28,68;UBERON:0002148,1.27e-25,2;UBERON:0006331,1.27e-25,2;UBERON:0009662,1.27e-25,2;UBERON:0010371,6.21e-25,104;UBERON:0007023,7.77e-23,114;UBERON:0010314,2.46e-19,132;UBERON:0002240,1.08e-17,3;UBERON:0005174,1.08e-17,3;UBERON:0001137,1.08e-17,3;UBERON:0004121,2.27e-14,171;UBERON:0000924,2.27e-14,171;UBERON:0006601,2.27e-14,171;UBERON:0000125,4.23e-13,9;UBERON:0002308,4.23e-13,9;UBERON:0000025,8.83e-13,192;UBERON:0003528,1.80e-12,34;UBERON:0002020,1.80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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C693 | |||
|description=CAGE_peak_at_chrX:106692537..106692551,+ | |||
|id=chrX:106692537..106692551,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.59e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.05e-18;3!UBERON:0006241;1.23e-17;3!UBERON:0003057;1.23e-17;3!UBERON:0006601;1.64e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.81e-07;2!DOID:4236;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.75e-07,2;DOID:4236,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.97e-56!57;UBERON:0005068!7.97e-56!57;UBERON:0006241!7.97e-56!57;UBERON:0007135!7.97e-56!57;UBERON:0005743!3.26e-53!86;UBERON:0001017!1.02e-51!82;UBERON:0000073!4.69e-49!94;UBERON:0001016!4.69e-49!94;UBERON:0000955!6.68e-45!69;UBERON:0006238!6.68e-45!69;UBERON:0002616!1.21e-44!59;UBERON:0003075!9.95e-43!86;UBERON:0007284!9.95e-43!86;UBERON:0007023!1.39e-40!115;UBERON:0002346!3.08e-40!90;UBERON:0002780!2.08e-31!41;UBERON:0001890!2.08e-31!41;UBERON:0006240!2.08e-31!41;UBERON:0003080!1.74e-30!42;UBERON:0002020!2.10e-30!34;UBERON:0003528!2.10e-30!34;UBERON:0001893!5.84e-30!34;UBERON:0003076!7.87e-29!15;UBERON:0003057!7.87e-29!15;UBERON:0002791!2.66e-28!33;UBERON:0000033!1.39e-26!123;UBERON:0001869!1.82e-26!32;UBERON:0000153!4.35e-26!129;UBERON:0007811!4.35e-26!129;UBERON:0004121!9.13e-26!169;UBERON:0003056!1.91e-25!61;UBERON:0000924!7.96e-25!173;UBERON:0006601!7.96e-25!173;UBERON:0004733!2.47e-22!12;UBERON:0002028!2.47e-22!12;UBERON:0007277!2.47e-22!12;UBERON:0004732!2.18e-20!13;UBERON:0000956!3.44e-20!25;UBERON:0000203!3.44e-20!25;UBERON:0002619!4.35e-18!22;UBERON:0002680!8.57e-16!9;UBERON:0001895!8.57e-16!9;UBERON:0010092!8.57e-16!9;UBERON:0001950!1.09e-14!20;UBERON:0002298!1.16e-14!8;UBERON:0002308!6.09e-12!9;UBERON:0000125!6.09e-12!9;UBERON:0000025!1.13e-11!194;UBERON:0002037!1.77e-09!6;UBERON:0006215!1.77e-09!6;UBERON:0000064!2.64e-09!219;UBERON:0000475!5.45e-09!365;UBERON:0000062!7.31e-09!511;UBERON:0004111!7.52e-09!241;UBERON:0000483!9.95e-09!309;UBERON:0002420!1.04e-08!9;UBERON:0007245!1.04e-08!9;UBERON:0010009!1.04e-08!9;UBERON:0010011!1.04e-08!9;UBERON:0000454!1.04e-08!9;UBERON:0000477!1.05e-08!286;UBERON:0000119!1.63e-08!312;UBERON:0000200!1.96e-08!6;UBERON:0001896!2.41e-08!3;UBERON:0005290!2.41e-08!3;UBERON:0010096!2.41e-08!3;UBERON:0000988!3.26e-08!3;UBERON:0002240!3.26e-08!3;UBERON:0006331!3.75e-08!3;UBERON:0009663!5.67e-08!7;UBERON:0000922!7.34e-08!612;UBERON:0000349!1.54e-07!5;UBERON:0001872!2.20e-07!5;UBERON:0000468!8.34e-07!659 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.40669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,1.56262495439963,0,0.482385754501632,4.5774520895125,2.98564001814306,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0.160753148465019,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.85125642439766,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.751145584238999,1.72022758707021,1.88579387612649,2.04918129706565,0.138348634936231,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.484100767249525,0.322951291263702,0,0,0,0,0,0,0.690359926060101,0,0.752103283492572,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.380494861163441,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,1.01954599465248,0.197318320688547,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.701818390386317,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,2.1593931382644,1.78227840196252,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.752122617877125,0.151557396436479,0,0.829169439458779,0.930896962757057,0,0.23806443146374,0,0,0,0.891060215894309,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chrX:106692537..106692551,+ | |||
}} |
Revision as of 10:20, 14 September 2013
Short description: | p@chrX:106692537..106692551, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:106692537..106692551, + |
Coexpression cluster: | C693_cerebellum_medulla_spinal_locus_Hepatocyte_pons_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.75e-07 | 2 |
carcinosarcoma | 1.75e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.