FFCP PHASE1:Hg19::chr1:183605200..183605219,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30281 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SXQ6,Q9NZL6 | |||
|association_with_transcript=0bp_to_ENST00000304685,ENST00000367531,NM_015149,uc001gqm.2,uc010pof.1,uc010pog.1,uc010poh.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_RGL1_5end | |||
|id=chr1:183605200..183605219,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.72e-16;82!UBERON:0006215;1.07e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.50e-25!57;UBERON:0005068!3.50e-25!57;UBERON:0006241!3.50e-25!57;UBERON:0007135!3.50e-25!57;UBERON:0001017!2.26e-23!82;UBERON:0002616!4.25e-23!59;UBERON:0000955!5.14e-23!69;UBERON:0006238!5.14e-23!69;UBERON:0005743!2.42e-22!86;UBERON:0000073!2.70e-22!94;UBERON:0001016!2.70e-22!94;UBERON:0002780!5.12e-22!41;UBERON:0001890!5.12e-22!41;UBERON:0006240!5.12e-22!41;UBERON:0003080!6.72e-21!42;UBERON:0007023!3.82e-20!115;UBERON:0002346!1.84e-18!90;UBERON:0003075!2.17e-18!86;UBERON:0007284!2.17e-18!86;UBERON:0002020!3.92e-18!34;UBERON:0003528!3.92e-18!34;UBERON:0001893!5.77e-18!34;UBERON:0002791!2.95e-17!33;UBERON:0001869!3.16e-17!32;UBERON:0002619!7.74e-15!22;UBERON:0003056!1.37e-14!61;UBERON:0001950!1.38e-13!20;UBERON:0000153!2.29e-13!129;UBERON:0007811!2.29e-13!129;UBERON:0000033!3.23e-13!123;UBERON:0000956!8.23e-13!25;UBERON:0000203!8.23e-13!25;UBERON:0000924!7.58e-12!173;UBERON:0006601!7.58e-12!173;UBERON:0004121!1.37e-11!169;UBERON:0000025!8.18e-11!194;UBERON:0000477!7.78e-10!286;UBERON:0000483!8.90e-09!309;UBERON:0000119!1.82e-08!312;UBERON:0004111!5.06e-08!241;UBERON:0000475!7.47e-08!365;UBERON:0002420!4.75e-07!9;UBERON:0007245!4.75e-07!9;UBERON:0010009!4.75e-07!9;UBERON:0010011!4.75e-07!9;UBERON:0000454!4.75e-07!9;UBERON:0002308!7.02e-07!9;UBERON:0000125!7.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.45e-45;34!UBERON:0002020;6.45e-45;34!UBERON:0002619;2.36e-44;22!UBERON:0001869;3.84e-44;32!UBERON:0002791;1.06e-43;32!UBERON:0002780;2.05e-42;41!UBERON:0001890;2.05e-42;41!UBERON:0001893;6.99e-42;34!UBERON:0001950;1.91e-40;20!UBERON:0000956;2.01e-38;25!UBERON:0000203;2.01e-38;25!UBERON:0000073;7.95e-38;53!UBERON:0002616;7.95e-38;53!UBERON:0000955;3.22e-28;68!UBERON:0001017;1.15e-25;75!UBERON:0001016;1.53e-21;83!UBERON:0002420;1.33e-15;9!UBERON:0007245;1.33e-15;9!UBERON:0010009;1.33e-15;9!UBERON:0010011;1.33e-15;9!UBERON:0000454;1.33e-15;9!UBERON:0000125;2.52e-15;9!UBERON:0002308;2.52e-15;9!UBERON:0000200;9.45e-15;6!UBERON:0007023;8.28e-14;114!UBERON:0001872;4.69e-12;5!UBERON:0009663;5.22e-12;7!UBERON:0002021;5.67e-12;5!UBERON:0004732;6.58e-12;13!UBERON:0000349;2.27e-11;5!UBERON:0001871;2.92e-11;6!UBERON:0001894;5.48e-11;7!UBERON:0000369;1.85e-10;4!UBERON:0002435;1.85e-10;4!UBERON:0000204;1.85e-10;4!UBERON:0004733;2.07e-10;12!UBERON:0002028;2.07e-10;12!UBERON:0003296;2.44e-09;4!UBERON:0010133;2.44e-09;4!UBERON:0002298;1.36e-08;6!UBERON:0002680;1.92e-08;9!UBERON:0001895;1.92e-08;9!UBERON:0011216;2.67e-08;132!UBERON:0005383;3.38e-08;3!UBERON:0005382;3.38e-08;3!UBERON:0001870;3.98e-08;3!UBERON:0000988;4.70e-07;3!UBERON:0010314;4.93e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.33e-69,53;UBERON:0002616,7.33e-69,53;UBERON:0001049,5.24e-68,56;UBERON:0005068,5.24e-68,56;UBERON:0006241,5.24e-68,56;UBERON:0007135,5.24e-68,56;UBERON:0002780,7.48e-60,41;UBERON:0001890,7.48e-60,41;UBERON:0003080,7.48e-60,41;UBERON:0006240,7.48e-60,41;UBERON:0000955,1.70e-58,68;UBERON:0006238,1.70e-58,68;UBERON:0001017,1.03e-54,81;UBERON:0003528,3.48e-53,34;UBERON:0002020,3.48e-53,34;UBERON:0001016,3.19e-52,89;UBERON:0003075,2.24e-51,82;UBERON:0007284,2.24e-51,82;UBERON:0001869,2.57e-50,32;UBERON:0001893,3.62e-50,34;UBERON:0002791,1.10e-49,32;UBERON:0002346,2.41e-48,86;UBERON:0002619,3.80e-45,22;UBERON:0007023,1.25e-42,114;UBERON:0003056,1.46e-41,61;UBERON:0001950,3.46e-41,20;UBERON:0010371,2.12e-39,104;UBERON:0000956,4.06e-39,25;UBERON:0000203,4.06e-39,25;UBERON:0010314,4.54e-34,132;UBERON:0004121,2.09e-27,171;UBERON:0000924,2.09e-27,171;UBERON:0006601,2.09e-27,171;UBERON:0000025,1.07e-19,192;UBERON:0011216,1.41e-16,223;UBERON:0002420,1.03e-15,9;UBERON:0007245,1.03e-15,9;UBERON:0010009,1.03e-15,9;UBERON:0010011,1.03e-15,9;UBERON:0000454,1.03e-15,9;UBERON:0000125,3.10e-15,9;UBERON:0002308,3.10e-15,9;UBERON:0004111,3.28e-15,240;UBERON:0000200,1.23e-14,6;UBERON:0001872,2.53e-12,5;UBERON:0002021,3.81e-12,5;UBERON:0004732,4.19e-12,13;UBERON:0009663,7.15e-12,7;UBERON:0000349,1.05e-11,5;UBERON:0001871,1.33e-11,6;UBERON:0001894,8.00e-11,7;UBERON:0006222,8.00e-11,7;UBERON:0000483,1.32e-10,306;UBERON:0004733,1.51e-10,12;UBERON:0002028,1.51e-10,12;UBERON:0007277,1.51e-10,12;UBERON:0000369,1.70e-10,4;UBERON:0002435,1.70e-10,4;UBERON:0000204,1.70e-10,4;UBERON:0010082,1.70e-10,4;UBERON:0003076,1.95e-10,15;UBERON:0003057,1.95e-10,15;UBERON:0000119,2.31e-10,309;UBERON:0003296,2.04e-09,4;UBERON:0010133,2.04e-09,4;UBERON:0002298,1.35e-08,6;UBERON:0002680,1.35e-08,9;UBERON:0001895,1.35e-08,9;UBERON:0010092,1.35e-08,9;UBERON:0005383,3.12e-08,3;UBERON:0005382,3.12e-08,3;UBERON:0001870,4.42e-08,3;UBERON:0000988,4.45e-07,3 | |||
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| |||
|short_description=p4@RGL1 | |||
}} |
Revision as of 22:44, 10 January 2014
Short description: | p4@RGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RGL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000304685, ENST00000367531, NM_015149, uc001gqm.2, uc010pof.1, uc010pog.1, uc010poh.1_5end |
EntrezGene: | RGL1 |
HGNC: | 30281 |
UniProt: | Q5SXQ6Q9NZL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data