FFCP PHASE1:Hg19::chr19:291365..291427,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9230 | |||
|TSSclassifier=strong | |||
|UniProt=O43688,E9PAY8 | |||
|association_with_transcript=7bp_to_ENST00000269812,ENST00000434325,NM_003712,NM_177526,uc002loi.2,uc002loj.2_5end | |||
|description=CAGE_peak_1_at_PPAP2C_5end | |||
|id=chr19:291365..291427,- | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-36!254;CL:0002076!1.22e-08!43;CL:0000082!3.02e-08!19;CL:0000076!5.09e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.62e-08;19!CL:0002076;5.81e-07;42!CL:1000497;6.08e-07;17!CL:0002518;6.08e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.05e-37,253;CL:0002076,2.07e-09,42;CL:0000082,1.81e-08,19;CL:1000497,6.04e-07,17;CL:0002518,6.04e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.27e-14;29 | |||
|ontology_enrichment_disease=DOID:305!3.30e-23!106;DOID:0050687!1.07e-18!143;DOID:299!1.03e-10!25;DOID:0050615!1.83e-08!16;DOID:1324!6.56e-08!15;DOID:14566!2.15e-07!239;DOID:120!4.74e-07!27;DOID:162!5.86e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:299;2.31e-11;25!DOID:0050615;9.74e-09;16!DOID:1324;3.79e-08;15!DOID:305;1.36e-07;106!DOID:120;1.39e-07;27!DOID:193;3.17e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.17e-25,106;DOID:0050687,2.81e-19,143;DOID:299,2.16e-11,25;DOID:14566,6.36e-09,239;DOID:0050615,1.11e-08,16;DOID:162,2.21e-08,235;DOID:1324,4.25e-08,15;DOID:120,1.35e-07,27;DOID:193,3.00e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000064!2.94e-22!219;UBERON:0000481!2.67e-21!347;UBERON:0000464!1.51e-17!104;UBERON:0000922!2.62e-17!612;UBERON:0004119!7.60e-17!169;UBERON:0000925!7.60e-17!169;UBERON:0006595!7.60e-17!169;UBERON:0000468!3.12e-16!659;UBERON:0000477!4.30e-16!286;UBERON:0000475!1.49e-15!365;UBERON:0002050!2.20e-15!605;UBERON:0005423!2.20e-15!605;UBERON:0000923!3.08e-15!604;UBERON:0005291!3.08e-15!604;UBERON:0006598!3.08e-15!604;UBERON:0002532!3.08e-15!604;UBERON:0008947!2.38e-14!38;UBERON:0003258!2.38e-14!38;UBERON:0001007!3.17e-14!155;UBERON:0001555!3.17e-14!155;UBERON:0007026!3.17e-14!155;UBERON:0000063!6.67e-14!97;UBERON:0001004!8.54e-14!72;UBERON:0004111!1.05e-13!241;UBERON:0000062!2.48e-13!511;UBERON:0000466!5.85e-13!126;UBERON:0000480!8.69e-13!626;UBERON:0000467!9.50e-13!625;UBERON:0000033!4.02e-12!123;UBERON:0004121!9.06e-12!169;UBERON:0000483!1.80e-11!309;UBERON:0000077!1.82e-11!130;UBERON:0000119!1.92e-11!312;UBERON:0000072!2.23e-11!46;UBERON:0000153!2.65e-11!129;UBERON:0007811!2.65e-11!129;UBERON:0000065!3.78e-11!53;UBERON:0000924!4.14e-11!173;UBERON:0006601!4.14e-11!173;UBERON:0004921!6.37e-11!129;UBERON:0004185!6.37e-11!129;UBERON:0001048!7.09e-11!168;UBERON:0001041!4.60e-10!98;UBERON:0005177!4.64e-10!107;UBERON:0003104!1.11e-09!238;UBERON:0009142!1.11e-09!238;UBERON:0002553!1.19e-09!70;UBERON:0000025!3.72e-09!194;UBERON:0005178!3.95e-09!34;UBERON:0002224!3.95e-09!34;UBERON:0003075!9.35e-09!86;UBERON:0007284!9.35e-09!86;UBERON:0005181!2.17e-08!35;UBERON:0000058!2.61e-08!26;UBERON:0003886!2.62e-08!63;UBERON:0004802!3.02e-08!19;UBERON:0000115!3.02e-08!19;UBERON:0002048!4.77e-08!22;UBERON:0000117!4.77e-08!22;UBERON:0000171!4.77e-08!22;UBERON:0000170!4.77e-08!22;UBERON:0005597!4.77e-08!22;UBERON:0000118!4.77e-08!22;UBERON:0002346!6.01e-08!90;UBERON:0007023!3.27e-07!115;UBERON:0003056!4.61e-07!61;UBERON:0005743!5.10e-07!86;UBERON:0005153!5.21e-07!37;UBERON:0001049!5.61e-07!57;UBERON:0005068!5.61e-07!57;UBERON:0006241!5.61e-07!57;UBERON:0007135!5.61e-07!57;UBERON:0000073!8.63e-07!94;UBERON:0001016!8.63e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.32e-12;37!UBERON:0000065;2.22e-10;44!UBERON:0005178;5.41e-09;34!UBERON:0002224;5.41e-09;34!UBERON:0004807;1.46e-08;22!UBERON:0004802;1.62e-08;19!UBERON:0000115;1.62e-08;19!UBERON:0002048;2.44e-08;22!UBERON:0000117;2.44e-08;22!UBERON:0000171;2.44e-08;22!UBERON:0000170;2.44e-08;22!UBERON:0005181;3.15e-08;35!UBERON:0001004;3.82e-08;65!UBERON:0005911;3.86e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,7.29e-16,223;UBERON:0008947,6.27e-15,38;UBERON:0003258,6.27e-15,38;UBERON:0004119,2.08e-14,160;UBERON:0000925,2.08e-14,160;UBERON:0006595,2.08e-14,160;UBERON:0001004,9.95e-14,74;UBERON:0000922,1.48e-13,592;UBERON:0004111,2.45e-12,240;UBERON:0001007,7.07e-12,145;UBERON:0001555,7.07e-12,145;UBERON:0007026,7.07e-12,145;UBERON:0000072,4.02e-11,47;UBERON:0000065,5.87e-11,54;UBERON:0005423,7.21e-11,581;UBERON:0005178,4.59e-10,34;UBERON:0002224,4.59e-10,34;UBERON:0005177,8.05e-10,101;UBERON:0004121,2.11e-09,171;UBERON:0000924,2.11e-09,171;UBERON:0006601,2.11e-09,171;UBERON:0005181,2.31e-09,35;UBERON:0000483,6.77e-09,306;UBERON:0002050,7.35e-09,564;UBERON:0004921,7.82e-09,118;UBERON:0000119,9.45e-09,309;UBERON:0001048,1.12e-08,160;UBERON:0000923,1.71e-08,560;UBERON:0010316,1.71e-08,560;UBERON:0005291,1.71e-08,560;UBERON:0006598,1.71e-08,560;UBERON:0010317,1.71e-08,560;UBERON:0002532,1.71e-08,560;UBERON:0004802,1.81e-08,19;UBERON:0000115,1.81e-08,19;UBERON:0001041,2.44e-08,87;UBERON:0002048,2.84e-08,22;UBERON:0000117,2.84e-08,22;UBERON:0000171,2.84e-08,22;UBERON:0000170,2.84e-08,22;UBERON:0005597,2.84e-08,22;UBERON:0000118,2.84e-08,22;UBERON:0003075,4.17e-08,82;UBERON:0007284,4.17e-08,82;UBERON:0000025,6.06e-08,192;UBERON:0010371,2.54e-07,104;UBERON:0003056,2.59e-07,61;UBERON:0003133,3.02e-07,48;UBERON:0000915,4.61e-07,52;UBERON:0002346,4.69e-07,86;UBERON:0001049,5.14e-07,56;UBERON:0005068,5.14e-07,56;UBERON:0006241,5.14e-07,56;UBERON:0007135,5.14e-07,56;UBERON:0002553,7.59e-07,61;UBERON:0005156,8.21e-07,59;UBERON:0000990,8.21e-07,59 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.704772020479856,2.00146596706261,0.893922188854576,0,0,5.05375898741465,0.522371256399677,4.17747692052565,43.2636724142905,10.9220686065086,18.4636884759917,6.31208400096238,9.94192127183747,3.36162573225888,3.61616716814386,0.730310090387373,3.41552959153355,5.66356867153224,11.8320400921667,1.88072832886853,1.43117993565528,3.28498620174922,0.376627918784408,0,0,0,0,0.383829398097213,0.309632246632152,7.35536979583142,4.819294700452,17.7481924880058,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,1.30216690771284,0,0,0,0,0.473554504088034,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,6.99557647014102,5.98669373148923,4.91874799881506,3.86388272718252,5.46442932438813,4.44941331341315,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,1.25849830862972,3.30141650328081,0.417989933073621,4.65150166504792,7.47109151642091,3.68192674041137,10.0707329277287,15.2054421143703,10.9827925896676,4.41195696415042,4.0507097394088,1.69669483739752,1.34717623575702,4.16662477788292,4.5994991239765,2.84779697870439,2.01521918323448,0,0,18.752044242129,0.496971951695318,1.2663051166458,2.91300197789081,3.44203944898576,1.41867352879343,0.560677600142307,0,0.98667019366864,2.8008993185979,2.02066008104532,4.08654757783647,1.66493170409425,2.88087962239999,1.87457145467037,0.936480230490962,2.2818872861778,2.09228152772521,3.64046945795671,0.971237666208789,1.26405726032024,2.65400422631361,6.1417158655884,7.12947890112782,8.31602000097437,4.45080472701402,0,0,5.38675564653012,2.25213335769535,1.38532057742091,0.438977620880838,0.919463387397059,4.35690370829131,0.794025282120147,0.358779271377724,0.213557388818567,0,0.900273288253207,0.618315175430633,0.515281080091258,0.37223371266318,4.89451363499672,1.65642908774038,0,0,0.646584227275248,0,0.10075209822764,1.69560592310488,8.88999924551165,3.81844568827169,5.44928731239107,9.63592278423804,17.3613996501146,11.5032003440823,7.67091807113741,8.83122978064699,2.18986415445498,0,0.643240938192885,1.38134921352481,0,0,22.9515192077297,19.2186546689036,22.8960478389308,25.3676137284506,20.4806677446862,23.7270619111097,30.337044336037,18.4448177217825,26.1628066723545,1.4763109092493,2.80483547606892,1.6462960453256,4.41026134156626,0,0,0,0,4.5505722260952,4.97546649865724,4.60951198716227,3.37205259772859,3.41798506199545,3.33318402570707,6.51616610620649,4.15973914111831,14.4331342025273,6.60803308357938,0.939269553886573,8.8063533134255,12.5006088395685,17.1228737011138,18.1747011530633,13.735778593518,0,0,0,11.2480600784132,1.17587489739202,4.53680311175637,2.68675568108545,0.871901815541886,8.05103626246943,0,0.088048434013226,0.621984346622316,0.288239906833923,0.50496973370552,2.79390734885544,6.875791660049,2.34434894420094,1.71072446022705,0.205654985406647,4.80548892550268,0.857479297891735,3.7003257833969,0.87192013766656,2.27348686044945,4.13669490424889,0,4.22651376278,6.64845291462176,11.4408180602503,0.514414748524284,0,2.1313774321288,1.57275793023962,2.71310802695722,6.58592269424615,1.62868092146868,1.77695974371273,4.75171123760058,14.4690900988601,18.3022026306062,18.3950303774985,0,0,0,4.55287225434007,5.7430967917057,2.85273810081437,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.4538298343828,12.0040925054323,12.4781910901878,0.623912584592421,0.178428988797162,0.946214490203608,0.234282829985426,2.40756879782175,29.562975527278,2.0694614258501,1.32845119707087,5.16233671916769,4.43106433787223,10.573262502988,3.77457766191941,0,0,0,6.36567900037145,13.3148351608398,11.1884408531982,0,0,0,2.56278298511402,0.511707249066704,1.44768529029247,0,2.7757744884478,4.97172830876756,0.9033987161519,8.30807086693794,4.41599438147845,6.88898862672247,12.4314011588037,17.0349829531408,0.459257792658427,0.182091168006717,4.72047893853927,24.3647790970002,7.62451837333706,28.2365916903668,21.9208836979891,5.27758144464378,14.7853399292166,5.4429985688485,4.75015015424707,6.16909010761157,6.50271450105247,12.5422443463713,11.9791848331168,29.0876603125053,18.1338551324964,0,0,23.3369613855914,17.7127908677841,13.3405141812364,2.67906630284078,0,0.082509499920588,3.44559322797703,3.90036147621913,0,3.963499449977,1.84858340537573,1.07452572308291,1.7918754422989,1.93356440762893,3.62541734785571,4.85791776271775,0.801288320820636,5.78497203763423,1.53752053892085,2.04180339991335,4.8555734810664,0,0.94443704049192,4.8792608911242,2.46426864140871,1.59691809095107,1.73986598415015,7.4129687641568,0.572499546967965,3.72158369359667,0,0.571890581771475,4.35026245229268,2.1396949401696,4.45484547096312,0.78494864019923,0,2.74537029736055,5.7728077149386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| |||
|short_description=p1@PPAP2C | |||
}} |
Revision as of 20:03, 20 January 2014
Short description: | p1@PPAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000269812, ENST00000434325, NM_003712, NM_177526, uc002loi.2, uc002loj.2_5end |
EntrezGene: | PPAP2C |
HGNC: | 9230 |
UniProt: | O43688E9PAY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.05e-37 | 253 |
endo-epithelial cell | 2.07e-09 | 42 |
epithelial cell of lung | 1.81e-08 | 19 |
kidney cell | 6.04e-07 | 17 |
kidney epithelial cell | 6.04e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.17e-25 | 106 |
cell type cancer | 2.81e-19 | 143 |
adenocarcinoma | 2.16e-11 | 25 |
disease of cellular proliferation | 6.36e-09 | 239 |
respiratory system cancer | 1.11e-08 | 16 |
cancer | 2.21e-08 | 235 |
lung cancer | 4.25e-08 | 15 |
female reproductive organ cancer | 1.35e-07 | 27 |
reproductive organ cancer | 3.00e-07 | 29 |