FFCP PHASE1:Hg19::chr2:142249645..142249648,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:142249645..142249648,- | |||
|id=chr2:142249645..142249648,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;6.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1!UBERON:0005425;2.93e-23;1!UBERON:0010122;2.45e-12;2!UBERON:0003056;1.17e-08;3!UBERON:0005062;8.37e-07;4!UBERON:0007284;8.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.49e-07;4!DOID:1612;6.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.48e-65!57;UBERON:0005068!4.48e-65!57;UBERON:0006241!4.48e-65!57;UBERON:0007135!4.48e-65!57;UBERON:0002346!6.23e-59!90;UBERON:0002780!7.84e-59!41;UBERON:0001890!7.84e-59!41;UBERON:0006240!7.84e-59!41;UBERON:0003080!3.10e-57!42;UBERON:0002020!9.06e-56!34;UBERON:0003528!9.06e-56!34;UBERON:0001893!4.15e-55!34;UBERON:0002791!7.34e-53!33;UBERON:0002616!8.65e-53!59;UBERON:0003075!3.33e-51!86;UBERON:0007284!3.33e-51!86;UBERON:0001869!6.40e-51!32;UBERON:0001017!1.80e-48!82;UBERON:0000955!3.48e-48!69;UBERON:0006238!3.48e-48!69;UBERON:0005743!1.06e-45!86;UBERON:0002619!2.78e-45!22;UBERON:0000073!8.37e-45!94;UBERON:0001016!8.37e-45!94;UBERON:0003056!1.27e-41!61;UBERON:0001950!2.84e-40!20;UBERON:0000956!2.43e-39!25;UBERON:0000203!2.43e-39!25;UBERON:0007023!4.89e-34!115;UBERON:0000924!6.41e-34!173;UBERON:0006601!6.41e-34!173;UBERON:0004121!7.11e-29!169;UBERON:0000033!2.73e-28!123;UBERON:0000153!5.09e-28!129;UBERON:0007811!5.09e-28!129;UBERON:0002420!6.04e-18!9;UBERON:0007245!6.04e-18!9;UBERON:0010009!6.04e-18!9;UBERON:0010011!6.04e-18!9;UBERON:0000454!6.04e-18!9;UBERON:0002308!1.16e-17!9;UBERON:0000125!1.16e-17!9;UBERON:0001871!1.37e-15!7;UBERON:0000200!3.72e-15!6;UBERON:0000025!4.33e-15!194;UBERON:0000349!5.44e-14!5;UBERON:0002021!2.54e-13!5;UBERON:0009663!5.89e-13!7;UBERON:0000369!9.18e-11!4;UBERON:0002435!9.18e-11!4;UBERON:0000204!9.18e-11!4;UBERON:0010082!9.18e-11!4;UBERON:0004111!1.18e-10!241;UBERON:0000064!1.88e-10!219;UBERON:0003076!5.41e-10!15;UBERON:0003057!5.41e-10!15;UBERON:0000477!1.11e-09!286;UBERON:0000483!1.94e-09!309;UBERON:0000119!3.13e-09!312;UBERON:0006331!7.77e-09!3;UBERON:0000988!8.40e-09!3;UBERON:0005383!1.24e-08!3;UBERON:0005382!1.24e-08!3;UBERON:0002771!1.83e-08!3;UBERON:0002240!1.92e-08!3;UBERON:0001872!2.36e-08!5;UBERON:0000475!4.02e-08!365;UBERON:0002298!4.74e-08!8;UBERON:0000062!1.06e-07!511;UBERON:0004732!6.52e-07!13;UBERON:0001876!7.64e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.93e-23;1!UBERON:0000941;2.93e-23;1!UBERON:0001785;2.93e-23;1!UBERON:0002464;2.93e-23;1!UBERON:0004904;2.93e-23;1!UBERON:0001021;2.93e-23;1!UBERON:0005208;2.93e-23;1!UBERON:0004145;2.93e-23;1!UBERON:0005946;2.93e-23;1!UBERON:0005965;2.93e-23;1!UBERON:0002078;2.93e-23;1!UBERON:0002021;1.48e-18;5!UBERON:0002791;3.20e-17;32!UBERON:0001869;3.20e-17;32!UBERON:0001950;3.77e-17;20!UBERON:0001893;4.26e-16;34!UBERON:0002619;1.06e-15;22!UBERON:0000956;6.09e-14;25!UBERON:0000203;6.09e-14;25!UBERON:0002780;2.34e-13;41!UBERON:0001890;2.34e-13;41!UBERON:0003528;6.39e-13;34!UBERON:0002020;6.39e-13;34!UBERON:0001876;2.45e-12;2!UBERON:0001873;2.45e-12;2!UBERON:0003714;2.45e-12;2!UBERON:0005162;2.45e-12;2!UBERON:0000122;2.45e-12;2!UBERON:0002081;2.45e-12;2!UBERON:0002133;2.45e-12;2!UBERON:0002420;9.23e-11;9!UBERON:0007245;9.23e-11;9!UBERON:0010009;9.23e-11;9!UBERON:0010011;9.23e-11;9!UBERON:0000454;9.23e-11;9!UBERON:0003978;1.17e-08;3!UBERON:0004151;1.17e-08;3!UBERON:0000946;1.17e-08;3!UBERON:0005383;1.17e-08;3!UBERON:0005382;1.17e-08;3!UBERON:0001911;6.49e-07;4!UBERON:0000369;8.37e-07;4!UBERON:0002435;8.37e-07;4!UBERON:0002346;8.37e-07;4!UBERON:0000923;8.37e-07;4!UBERON:0010316;8.37e-07;4!UBERON:0005291;8.37e-07;4!UBERON:0000204;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.28e-23,1;UBERON:0005208,3.28e-23,1;UBERON:0005946,3.28e-23,1;UBERON:0005965,3.28e-23,1;UBERON:0002078,3.28e-23,1;UBERON:0000941,4.10e-23,1;UBERON:0001785,4.10e-23,1;UBERON:0002464,4.10e-23,1;UBERON:0004904,4.10e-23,1;UBERON:0001021,4.10e-23,1;UBERON:0003902,4.10e-23,1;UBERON:0005425,4.10e-23,1;UBERON:0002021,1.62e-18,5;UBERON:0001950,4.46e-17,20;UBERON:0002791,8.20e-17,32;UBERON:0001869,8.20e-17,32;UBERON:0002346,5.67e-16,86;UBERON:0003528,7.24e-16,34;UBERON:0002020,7.24e-16,34;UBERON:0001893,7.24e-16,34;UBERON:0002619,1.24e-15,22;UBERON:0000956,6.98e-14,25;UBERON:0000203,6.98e-14,25;UBERON:0002780,2.92e-13,41;UBERON:0001890,2.92e-13,41;UBERON:0003080,2.92e-13,41;UBERON:0006240,2.92e-13,41;UBERON:0010371,3.26e-13,104;UBERON:0003075,7.76e-13,82;UBERON:0007284,7.76e-13,82;UBERON:0003056,9.40e-13,61;UBERON:0001873,1.85e-12,2;UBERON:0010122,1.85e-12,2;UBERON:0002081,2.59e-12,2;UBERON:0002133,2.59e-12,2;UBERON:0010227,2.59e-12,2;UBERON:0003714,2.90e-12,2;UBERON:0005162,2.90e-12,2;UBERON:0000122,2.90e-12,2;UBERON:0001876,3.62e-12,2;UBERON:0002420,9.69e-11,9;UBERON:0007245,9.69e-11,9;UBERON:0010009,9.69e-11,9;UBERON:0010011,9.69e-11,9;UBERON:0000454,9.69e-11,9;UBERON:0000073,2.35e-10,53;UBERON:0002616,2.35e-10,53;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0001049,8.10e-10,56;UBERON:0005068,8.10e-10,56;UBERON:0006241,8.10e-10,56;UBERON:0007135,8.10e-10,56;UBERON:0005383,9.66e-09,3;UBERON:0005382,9.66e-09,3;UBERON:0003978,1.21e-08,3;UBERON:0009751,1.21e-08,3;UBERON:0004151,1.21e-08,3;UBERON:0000946,1.21e-08,3;UBERON:0002523,1.21e-08,3;UBERON:0005983,1.21e-08,3;UBERON:0004145,1.21e-08,3;UBERON:0002165,1.21e-08,3;UBERON:0002062,1.21e-08,3;UBERON:0007280,1.21e-08,3;UBERON:0001016,1.38e-08,89;UBERON:0000955,5.12e-08,68;UBERON:0006238,5.12e-08,68;UBERON:0010314,6.07e-08,132;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0007023,6.62e-07,114;UBERON:0000369,7.27e-07,4;UBERON:0002435,7.27e-07,4;UBERON:0000204,7.27e-07,4;UBERON:0010082,7.27e-07,4;UBERON:0001017,8.95e-07,81;UBERON:0001781,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,2.36141999989728,0,0,0,0,0,0.583209226766509,0,1.77148277162768,0.482385754501632,0,0.884634079449797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.751145584238999,0,0,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.983091635014877,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,1.91317428091515,0.619678821295011,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.798169295285756,1.64093091392604,0.252071696221718,0.0691572524642179,0.322951291263702,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.620060389503552,0.0634158101939068,1.64092442705466,0,0,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0.33883824611688,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0.476128862927481,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:142249645..142249648,- | |||
}} |
Revision as of 05:38, 21 January 2014
Short description: | p@chr2:142249645..142249648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:142249645..142249648, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |