FFCP PHASE1:Hg19::chr7:20371077..20371122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |||
|TSSclassifier=weak | |||
|UniProt=P26012 | |||
|association_with_transcript=331bp_to_ENST00000222573_5end | |||
|coexpression_cluster_id=C4673 | |||
|description=CAGE_peak_6_at_ITGB8_5end | |||
|id=chr7:20371077..20371122,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.25e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000147;8.93e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.06e-09,8;CL:0000147,8.33e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.10e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.74e-37!86;UBERON:0000073!1.46e-36!94;UBERON:0001016!1.46e-36!94;UBERON:0001017!8.10e-35!82;UBERON:0001049!1.24e-31!57;UBERON:0005068!1.24e-31!57;UBERON:0006241!1.24e-31!57;UBERON:0007135!1.24e-31!57;UBERON:0000955!4.53e-27!69;UBERON:0006238!4.53e-27!69;UBERON:0002780!2.42e-26!41;UBERON:0001890!2.42e-26!41;UBERON:0006240!2.42e-26!41;UBERON:0003080!3.46e-25!42;UBERON:0002616!1.35e-24!59;UBERON:0002020!2.01e-24!34;UBERON:0003528!2.01e-24!34;UBERON:0001893!2.12e-24!34;UBERON:0002791!9.89e-24!33;UBERON:0003075!6.86e-23!86;UBERON:0007284!6.86e-23!86;UBERON:0001869!8.30e-23!32;UBERON:0000033!8.30e-23!123;UBERON:0000153!1.14e-22!129;UBERON:0007811!1.14e-22!129;UBERON:0002346!4.85e-22!90;UBERON:0004121!1.08e-21!169;UBERON:0000924!2.48e-21!173;UBERON:0006601!2.48e-21!173;UBERON:0007023!1.91e-20!115;UBERON:0003056!9.05e-19!61;UBERON:0000956!4.90e-18!25;UBERON:0000203!4.90e-18!25;UBERON:0000922!1.29e-16!612;UBERON:0002619!1.13e-15!22;UBERON:0000468!1.11e-14!659;UBERON:0001950!1.63e-14!20;UBERON:0002050!1.91e-14!605;UBERON:0005423!1.91e-14!605;UBERON:0000923!3.80e-14!604;UBERON:0005291!3.80e-14!604;UBERON:0006598!3.80e-14!604;UBERON:0002532!3.80e-14!604;UBERON:0000467!4.59e-14!625;UBERON:0000480!6.98e-14!626;UBERON:0004111!2.65e-13!241;UBERON:0000477!3.68e-11!286;UBERON:0000062!2.18e-10!511;UBERON:0000025!3.32e-10!194;UBERON:0002308!7.78e-08!9;UBERON:0000125!7.78e-08!9;UBERON:0003076!1.21e-07!15;UBERON:0003057!1.21e-07!15;UBERON:0002420!1.50e-07!9;UBERON:0007245!1.50e-07!9;UBERON:0010009!1.50e-07!9;UBERON:0010011!1.50e-07!9;UBERON:0000454!1.50e-07!9;UBERON:0000481!2.17e-07!347;UBERON:0000475!5.38e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.73e-38;34!UBERON:0003528;1.22e-37;34!UBERON:0002020;1.22e-37;34!UBERON:0002791;1.33e-37;32!UBERON:0001869;2.24e-37;32!UBERON:0002780;2.39e-34;41!UBERON:0001890;2.39e-34;41!UBERON:0000956;1.01e-31;25!UBERON:0000203;1.01e-31;25!UBERON:0000073;7.04e-30;53!UBERON:0002616;7.04e-30;53!UBERON:0002619;4.72e-27;22!UBERON:0001950;7.77e-25;20!UBERON:0001017;1.58e-20;75!UBERON:0000955;4.47e-20;68!UBERON:0001016;1.58e-18;83!UBERON:0000125;4.10e-14;9!UBERON:0002308;4.10e-14;9!UBERON:0002420;2.08e-13;9!UBERON:0007245;2.08e-13;9!UBERON:0010009;2.08e-13;9!UBERON:0010011;2.08e-13;9!UBERON:0000454;2.08e-13;9!UBERON:0009663;2.93e-11;7!UBERON:0002298;3.52e-10;6!UBERON:0001871;8.33e-10;6!UBERON:0004732;1.56e-08;13!UBERON:0002021;2.29e-08;5!UBERON:0001872;1.06e-07;5!UBERON:0007023;1.06e-07;114!UBERON:0011216;2.13e-07;132!UBERON:0000349;2.91e-07;5!UBERON:0004733;2.99e-07;12!UBERON:0002028;2.99e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.28e-59,81;UBERON:0001049,1.78e-57,56;UBERON:0005068,1.78e-57,56;UBERON:0006241,1.78e-57,56;UBERON:0007135,1.78e-57,56;UBERON:0001016,2.40e-55,89;UBERON:0000073,4.92e-53,53;UBERON:0002616,4.92e-53,53;UBERON:0002780,5.78e-48,41;UBERON:0001890,5.78e-48,41;UBERON:0003080,5.78e-48,41;UBERON:0006240,5.78e-48,41;UBERON:0000955,6.41e-47,68;UBERON:0006238,6.41e-47,68;UBERON:0003075,7.71e-47,82;UBERON:0007284,7.71e-47,82;UBERON:0002346,2.50e-45,86;UBERON:0003528,7.43e-45,34;UBERON:0002020,7.43e-45,34;UBERON:0001893,8.23e-45,34;UBERON:0002791,6.46e-42,32;UBERON:0001869,1.22e-41,32;UBERON:0003056,9.49e-40,61;UBERON:0010371,4.83e-36,104;UBERON:0004121,2.34e-32,171;UBERON:0000924,2.34e-32,171;UBERON:0006601,2.34e-32,171;UBERON:0000956,3.98e-32,25;UBERON:0000203,3.98e-32,25;UBERON:0002619,1.91e-27,22;UBERON:0001950,3.88e-25,20;UBERON:0010314,2.60e-23,132;UBERON:0007023,9.33e-23,114;UBERON:0011216,1.65e-20,223;UBERON:0000025,1.30e-15,192;UBERON:0000125,4.93e-14,9;UBERON:0002308,4.93e-14,9;UBERON:0004111,7.49e-14,240;UBERON:0002420,1.81e-13,9;UBERON:0007245,1.81e-13,9;UBERON:0010009,1.81e-13,9;UBERON:0010011,1.81e-13,9;UBERON:0000454,1.81e-13,9;UBERON:0009663,3.40e-11,7;UBERON:0003076,6.89e-11,15;UBERON:0003057,6.89e-11,15;UBERON:0002298,3.91e-10,6;UBERON:0000923,5.42e-10,560;UBERON:0010316,5.42e-10,560;UBERON:0005291,5.42e-10,560;UBERON:0006598,5.42e-10,560;UBERON:0010317,5.42e-10,560;UBERON:0002532,5.42e-10,560;UBERON:0001871,6.48e-10,6;UBERON:0002050,1.05e-09,564;UBERON:0000922,1.17e-09,592;UBERON:0005423,2.06e-09,581;UBERON:0000483,1.24e-08,306;UBERON:0004732,1.77e-08,13;UBERON:0002021,2.04e-08,5;UBERON:0000119,2.27e-08,309;UBERON:0001872,7.85e-08,5;UBERON:0000349,1.67e-07,5;UBERON:0004733,3.35e-07,12;UBERON:0002028,3.35e-07,12;UBERON:0007277,3.35e-07,12 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,2.01697543935533,1.20538905604795,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,1.25381888591235,13.4530913951597,15.7405588833817,15.0651167513763,1.14620108621927,1.06730766284929,0.787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,4.43196326825502,5.41470008169383,1.73608696572681,0.223915474239924,0,0,0,0,0,0.464858073811369,0,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,4.82643953031266,1.93645405075148,0,0,0,0,2.14258724659632,1.92557416245656,5.11469700639233,0,0.199463657621632,0,7.54544020434318,2.8369261234557,7.4738669879469,0,0,0,2.42159801053347,3.31449872388808,3.79754864929061,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55244006342983,0,0.87834785693126,0.851363990735132,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,1.2663051166458,18.9345128562903,3.15520282823695,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.276149695926898,0,0,0,0,0.193260853163297,0,0.860413786167011,0.487894824518382,0.397589304964456,0.69716365721711,0.518305275076852,1.26160425437814,1.82488679537915,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.185176890317059,0,0,0,4.05756417412769,0.117408694235822,0.721832238805369,0.462985512576611,1.52203321787679,0,0,0,0,0,0.93733833986777,0.16798212819886,0.708875486211932,0.0895585227028483,0.871901815541886,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0,2.41291998310242,5.72982638337417,3.51652341630141,0,2.77634230298973,2.70308752059526,4.0015700568281,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,1.19967589418468,0,0,2.10833939483032,0,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,0,0,0.256686072559497,20.0734753135746,3.90419561572865,6.18631050222156,4.02039036802437,7.65526501983796,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.601519410909855,0.368323955743585,0.229628896329213,0,0,0.451199612907412,1.38627606787947,0,0,1.37217117560738,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,2.56450125116389,0.328014645699706,3.25378394664303,0,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0,0.145016693914229,0,0.267096106940212,0,0.192190067365106,0.382838137483752,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0,3.1682753652067,1.05650146756755,0.136499911407986,0.848432591722276,0,0.551365343546124,0,3.5076070820301,0,1.31178950409327,2.63783490051515,0,0,0.286822704408103,0,0.7133421029625,0,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0.79312517629427,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,1.9882952955326,5.06409899077846,0.556543525114529,0,0,0.19924798825107,0.276283915531148,0.503865495708552,6.95427041014653,0.861593638227486,0,0.179736702294654,0,0,0.789147245095469,0,0,2.90799823828566,7.51421595110995,1.99613798001194,0,0,0,0.796554137998498,0.254253650292766,0,0,0,0,10.6288966297661,3.13550740426061,0,0.884634079449797,1.18219047581419,2.4132393686937,0,0.557694977114413,0.538651809526579,1.13942055847001,0.23056390438806,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,9.14103725691227,0,0,0,0.619202951523374,0.611030144933625,2.37216902944498,0.988511511572023,1.04421949505455,11.3233903407537,0,8.19925560038687,0,0.586993856796269,0.242780379534093,0.394584402849391,2.41981432097328,3.36680037793539,0.379119477770928,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,3.41531455235751,0.138674673013139,3.47119476670262,0.0979923974143777,0,0.52418000472609,1.20390222730132,0.0967563312890851,0.511625219603299,0.0821154570532092,0.387956065953678,0.529536760149002,9.49119111278236,0,0,5.76128243198496,0,0.64127056201227,0,0,0.576361668616424,0,0,0,0,0.471388069233591,0.543616824294456,0.313808538937,0.203996435272644,0.288950589901519,11.407985485486,11.3631464480354,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0,0.599037001496973,0,0,0.403100834920358,0,0,0,0.164831716762333,0,0.393709926058995,0,1.59045937961861,5.5843396505746,0.964518890790115,1.37539436597234,1.24632101408756,1.1248694577575,0,4.25246896606173,0,0.394028536495991,0.577000469484979,0,0,0.383830394638891,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0.226624183040251,0,0,8.01554329441613,6.87609529061988,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0.942324577501406,0.886068179966986,3.90484047686282,3.6305369904885,5.16068276121064,8.76339507141133,7.01689353237633,0.553394539744923,1.12482367165896,0.758245587708239,16.5569893456081,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.295710299979268,0.477890301491107,0.899606224327209,0.310525913752519,0,0,0,0.150257608997218,0.761610424337591,0.406870733204662,0.363697318405119,0.537052785212442,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,7.60421398834519,0.194860308839388,0.531459361253452,1.14495775979091,0,0,0.633936370075881,0.19998739585493,0,0,0,0,0.279759015438889,0.622077260032973,0.255788742607303,0.215649622793364,2.35898912783845,0.436838552768056,0,0.212574920101683,0,0,0,0,0,0,0,4.88142110733092,8.5017945795351,5.42755120794314,8.2046545696302,4.53729053199093,3.8728061379962,5.97459888837849,14.2769420259154,0.294443155503077,1.88751557356385,0.366857197043358,0.115525666150338,0,0,0,0.376051641746286,0.20170506870352,0,0,0.327543835020193,1.6264169483875,4.66009333866923,3.90539049306924,4.75379631952723,4.18544347279785,3.82882366312754,1.64477330057155,0.496211178389294,1.05522746615772,1.14986184875636,0,1.00885116665647,1.21393120847326,0.455324382702595,0.532214220975833,0.115233987555779,0,7.54464036042832,3.7490480930824,0,0.333694205676207,1.17739639275771,2.35673384874003,0.280272163313789,0.913158720509496,0.863710364874486,0,61.1839218152178,0,0.581207126840626,0.347716544605159,0,1.03608082081518,0.6828739083758,0.691259661814092,1.29068207646083,0.118332000730565,0.426067023795788,0.846774100381858,1.14553434272025,0.31020638566432,0,0.782988022584546,0.98150233615243,0.731507549893617,0,0,0,1.45713297917742,0.233939463462106,3.18321240258189,0,0.33883824611688,5.93678790425317,2.11347980993343,0.231522474323834,0.655678681511872,0,1.22574160876953,0,11.5821995597818,7.12911360785006,5.4945244585842,0,0,0,0,0.357107877211315,0.705789743431384,0.641930933513346,0,0.458729283404541,16.3407124792654,0,3.05961705859116,3.49080552272302,0.5290268405154,0.743990036333503,0.924351257262837,0,0.252332849670158,0.437062287854782,0,0,0.534434810531121,0.735159196278759,0,1.13668047327359,0.803892390468535,9.95003327350535,13.4462894620464,0.213233981900981,0.714193294391221,0.193766729508018,0.248298857183432,0.560659312903067,0.381882949668989,0.202117188958219,0.217716747896961,0.342233301085281,0.202056159043763,0.932388670104793,1.33064142618405,1.95367844666339,0,0,1.07790242527904,0,0.855690109280065,0.813792356631477,1.33151354837103,0.201273793591026,0 | |||
|short_description=p6@ITGB8 | |||
}} |
Revision as of 15:55, 22 January 2014
Short description: | p6@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB8_5end |
Coexpression cluster: | C4673_retina_substantia_optic_Astrocyte_melanoma_Neural_thalamus |
Association with transcript: | 331bp_to_ENST00000222573_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.06e-09 | 8 |
pigment cell | 8.33e-07 | 14 |