FFCP PHASE1:Hg19::chrX:13956737..13956808,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000454189_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_GPM6B_5end | |||
|id=chrX:13956737..13956808,- | |||
|ontology_enrichment_celltype=CL:0000133!9.66e-09!59;CL:0000055!4.71e-08!180;CL:0000221!4.53e-07!71;CL:0000148!8.76e-07!10;CL:0000541!8.76e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.71e-07;10!CL:0002319;5.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.93e-08,59;CL:0000148,1.72e-07,10;CL:0000541,1.72e-07,10;CL:0002319,5.91e-07,25;CL:0000333,7.19e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.29e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.39e-40!94;UBERON:0001016!3.39e-40!94;UBERON:0001017!5.09e-40!82;UBERON:0005743!6.17e-40!86;UBERON:0000924!1.98e-37!173;UBERON:0006601!1.98e-37!173;UBERON:0004121!3.95e-37!169;UBERON:0001049!2.34e-36!57;UBERON:0005068!2.34e-36!57;UBERON:0006241!2.34e-36!57;UBERON:0007135!2.34e-36!57;UBERON:0003075!3.53e-35!86;UBERON:0007284!3.53e-35!86;UBERON:0002346!5.04e-35!90;UBERON:0007023!2.92e-34!115;UBERON:0002616!2.50e-33!59;UBERON:0000955!2.39e-32!69;UBERON:0006238!2.39e-32!69;UBERON:0000033!1.88e-30!123;UBERON:0000153!1.59e-29!129;UBERON:0007811!1.59e-29!129;UBERON:0003080!3.49e-27!42;UBERON:0002780!4.90e-27!41;UBERON:0001890!4.90e-27!41;UBERON:0006240!4.90e-27!41;UBERON:0003056!1.32e-26!61;UBERON:0002020!1.07e-23!34;UBERON:0003528!1.07e-23!34;UBERON:0001893!1.11e-23!34;UBERON:0002791!5.33e-23!33;UBERON:0001869!3.62e-22!32;UBERON:0000475!8.37e-19!365;UBERON:0000481!5.88e-18!347;UBERON:0000956!1.70e-17!25;UBERON:0000203!1.70e-17!25;UBERON:0000922!3.41e-16!612;UBERON:0002619!7.68e-16!22;UBERON:0000119!8.08e-16!312;UBERON:0000483!3.38e-15!309;UBERON:0001950!1.82e-14!20;UBERON:0000468!9.35e-14!659;UBERON:0002050!1.46e-13!605;UBERON:0005423!1.46e-13!605;UBERON:0000923!3.08e-13!604;UBERON:0005291!3.08e-13!604;UBERON:0006598!3.08e-13!604;UBERON:0002532!3.08e-13!604;UBERON:0000477!3.18e-12!286;UBERON:0000064!9.63e-12!219;UBERON:0000467!6.59e-11!625;UBERON:0000480!1.03e-10!626;UBERON:0003076!3.73e-10!15;UBERON:0003057!3.73e-10!15;UBERON:0000025!7.48e-10!194;UBERON:0004111!5.02e-09!241;UBERON:0004732!8.21e-09!13;UBERON:0004733!4.38e-08!12;UBERON:0002028!4.38e-08!12;UBERON:0007277!4.38e-08!12;UBERON:0000062!4.52e-08!511;UBERON:0002308!1.19e-07!9;UBERON:0000125!1.19e-07!9;UBERON:0002420!1.46e-07!9;UBERON:0007245!1.46e-07!9;UBERON:0010009!1.46e-07!9;UBERON:0010011!1.46e-07!9;UBERON:0000454!1.46e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.70e-23;34!UBERON:0003528;6.62e-23;34!UBERON:0002020;6.62e-23;34!UBERON:0002791;8.83e-23;32!UBERON:0001869;1.03e-22;32!UBERON:0002780;5.01e-22;41!UBERON:0001890;5.01e-22;41!UBERON:0000073;8.08e-22;53!UBERON:0002616;8.08e-22;53!UBERON:0000956;1.19e-19;25!UBERON:0000203;1.19e-19;25!UBERON:0002619;8.99e-18;22!UBERON:0001950;3.28e-16;20!UBERON:0001017;6.14e-16;75!UBERON:0000955;1.50e-15;68!UBERON:0001016;1.70e-15;83!UBERON:0007023;1.72e-10;114!UBERON:0004732;8.98e-10;13!UBERON:0004733;5.99e-09;12!UBERON:0002028;5.99e-09;12!UBERON:0011216;1.26e-08;132!UBERON:0000125;1.76e-08;9!UBERON:0002308;1.76e-08;9!UBERON:0002420;2.24e-08;9!UBERON:0007245;2.24e-08;9!UBERON:0010009;2.24e-08;9!UBERON:0010011;2.24e-08;9!UBERON:0000454;2.24e-08;9!UBERON:0010314;6.01e-07;132!UBERON:0009663;7.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.13e-44,89;UBERON:0001017,1.58e-43,81;UBERON:0004121,3.57e-42,171;UBERON:0000924,3.57e-42,171;UBERON:0006601,3.57e-42,171;UBERON:0003075,5.28e-41,82;UBERON:0007284,5.28e-41,82;UBERON:0001049,6.95e-41,56;UBERON:0005068,6.95e-41,56;UBERON:0006241,6.95e-41,56;UBERON:0007135,6.95e-41,56;UBERON:0002346,3.90e-40,86;UBERON:0000073,2.38e-38,53;UBERON:0002616,2.38e-38,53;UBERON:0010371,4.67e-38,104;UBERON:0007023,8.12e-37,114;UBERON:0000955,7.19e-35,68;UBERON:0006238,7.19e-35,68;UBERON:0010314,1.52e-33,132;UBERON:0002780,1.77e-30,41;UBERON:0001890,1.77e-30,41;UBERON:0003080,1.77e-30,41;UBERON:0006240,1.77e-30,41;UBERON:0003056,7.04e-30,61;UBERON:0003528,1.10e-26,34;UBERON:0002020,1.10e-26,34;UBERON:0001893,1.15e-26,34;UBERON:0002791,4.96e-25,32;UBERON:0001869,6.00e-25,32;UBERON:0011216,3.33e-23,223;UBERON:0000956,1.21e-19,25;UBERON:0000203,1.21e-19,25;UBERON:0002619,9.18e-18,22;UBERON:0001950,3.35e-16,20;UBERON:0000119,1.05e-13,309;UBERON:0000483,4.37e-13,306;UBERON:0000922,2.05e-12,592;UBERON:0003076,2.60e-11,15;UBERON:0003057,2.60e-11,15;UBERON:0000923,4.86e-11,560;UBERON:0010316,4.86e-11,560;UBERON:0005291,4.86e-11,560;UBERON:0006598,4.86e-11,560;UBERON:0010317,4.86e-11,560;UBERON:0002532,4.86e-11,560;UBERON:0002050,7.07e-11,564;UBERON:0005423,1.07e-10,581;UBERON:0004732,8.66e-10,13;UBERON:0004733,5.77e-09,12;UBERON:0002028,5.77e-09,12;UBERON:0007277,5.77e-09,12;UBERON:0000025,1.23e-08,192;UBERON:0000125,1.79e-08,9;UBERON:0002308,1.79e-08,9;UBERON:0002420,2.26e-08,9;UBERON:0007245,2.26e-08,9;UBERON:0010009,2.26e-08,9;UBERON:0010011,2.26e-08,9;UBERON:0000454,2.26e-08,9;UBERON:0004111,5.46e-08,240;UBERON:0009663,7.24e-07,7 | |||
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| |||
|short_description=p1@GPM6B | |||
}} |
Revision as of 04:54, 23 January 2014
Short description: | p1@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPM6B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000454189_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.93e-08 | 59 |
melanocyte | 1.72e-07 | 10 |
melanoblast | 1.72e-07 | 10 |
neural cell | 5.91e-07 | 25 |
migratory neural crest cell | 7.19e-07 | 41 |