FFCP PHASE1:Hg19::chr18:59685444..59685459,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:59685444..59685459,- to FFCP PHASE1:Hg19::chr18:59685444..59685459,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:59685444..59685459,- | |||
|description=CAGE_peak_at_chr18:59685444..59685459,- | |||
|id=chr18:59685444..59685459,- | |||
|ontology_enrichment_celltype=CL:0000057!8.18e-22!75;CL:0002556!3.52e-13!6;CL:0002620!1.25e-10!23;CL:0002552!1.56e-10!5;CL:0000055!3.24e-09!180;CL:0000197!2.12e-08!6;CL:0000098!2.12e-08!6;CL:0002167!2.12e-08!6;CL:0002551!6.61e-08!6;CL:0002367!2.42e-07!2;CL:0002549!6.97e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002574;1.67e-23;1!CL:0002552;1.35e-18;5!CL:0002556;9.74e-16;6!CL:0000346;1.30e-08;3!CL:1000428;1.30e-08;3!CL:1000306;9.10e-07;4!CL:0002547;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,1.67e-23,1;CL:0002552,1.13e-18,5;CL:0002556,1.13e-15,6;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3;CL:0000057,2.04e-07,76;CL:1000306,9.11e-07,4;CL:0002547,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.10e-23;1!UBERON:0003852;4.10e-23;1!UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4 | |||
|ontology_enrichment_disease=DOID:171!2.20e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.50e-13!95;UBERON:0001758!3.52e-13!6;UBERON:0003672!3.52e-13!6;UBERON:0003129!6.47e-10!11;UBERON:0000165!3.49e-09!28;UBERON:0000930!3.49e-09!28;UBERON:0000075!2.90e-08!13;UBERON:0005944!2.90e-08!13;UBERON:0004288!2.90e-08!13;UBERON:0003089!2.90e-08!13;UBERON:0002067!4.43e-08!9;UBERON:0004016!4.43e-08!9;UBERON:0010083!4.43e-08!9;UBERON:0002199!4.46e-08!45;UBERON:0002416!4.46e-08!45;UBERON:0001444!4.77e-08!48;UBERON:0002097!5.37e-08!40;UBERON:0005969!2.42e-07!2;UBERON:0003956!2.42e-07!2;UBERON:0003947!6.97e-07!2;UBERON:0005629!6.97e-07!2;UBERON:0005358!6.97e-07!2;UBERON:0001886!6.97e-07!2;UBERON:0004086!6.97e-07!2;UBERON:0005282!6.97e-07!2;UBERON:0005281!6.97e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.10e-23;1!UBERON:0008193;4.10e-23;1!UBERON:0010912;4.10e-23;1!UBERON:0002514;4.10e-23;1!UBERON:0003457;4.10e-23;1!UBERON:0008907;4.10e-23;1!UBERON:0008001;4.10e-23;1!UBERON:0007213;4.10e-23;1!UBERON:0009891;4.10e-23;1!UBERON:0007914;4.10e-23;1!UBERON:0007375;4.10e-23;1!UBERON:0003323;4.10e-23;1!UBERON:0010258;4.10e-23;1!UBERON:0005253;4.10e-23;1!UBERON:0007842;4.10e-23;1!UBERON:0002397;4.10e-23;1!UBERON:0003113;4.10e-23;1!UBERON:0003277;4.10e-23;1!UBERON:0001709;4.10e-23;1!UBERON:0002244;4.10e-23;1!UBERON:0005620;4.10e-23;1!UBERON:0010364;4.10e-23;1!UBERON:0004288;4.10e-23;1!UBERON:0011137;1.10e-18;11!UBERON:0010323;1.10e-18;11!UBERON:0001758;9.74e-16;6!UBERON:0003672;9.74e-16;6!UBERON:0003129;1.23e-13;7!UBERON:0000075;4.49e-13;16!UBERON:0000165;4.96e-13;28!UBERON:0004089;2.90e-12;2!UBERON:0001828;5.22e-12;8!UBERON:0001444;8.48e-11;48!UBERON:0007811;4.19e-10;52!UBERON:0000033;8.02e-09;50!UBERON:0000412;1.30e-08;3!UBERON:0001992;1.30e-08;3!UBERON:0003729;9.51e-08;13!UBERON:0000153;7.26e-07;54!UBERON:0002346;7.27e-07;4!UBERON:0000923;7.27e-07;4!UBERON:0010316;7.27e-07;4!UBERON:0005291;7.27e-07;4!UBERON:0001708;9.10e-07;4!UBERON:0004797;9.10e-07;4!UBERON:0000415;9.10e-07;4!UBERON:0007240;9.10e-07;4!UBERON:0005742;9.10e-07;4!UBERON:0005734;9.10e-07;4!UBERON:0004664;9.10e-07;4!UBERON:0008895;9.10e-07;4!UBERON:0004663;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,5.13e-23,1;UBERON:0008193,5.13e-23,1;UBERON:0010912,5.13e-23,1;UBERON:0002514,5.13e-23,1;UBERON:0003457,5.13e-23,1;UBERON:0008907,5.13e-23,1;UBERON:0008001,5.13e-23,1;UBERON:0007213,5.13e-23,1;UBERON:0009891,5.13e-23,1;UBERON:0007914,5.13e-23,1;UBERON:0009292,5.13e-23,1;UBERON:0003099,5.13e-23,1;UBERON:0007375,5.13e-23,1;UBERON:0003323,5.13e-23,1;UBERON:0010258,5.13e-23,1;UBERON:0007842,5.13e-23,1;UBERON:0009494,5.13e-23,1;UBERON:0010042,5.13e-23,1;UBERON:0010045,5.13e-23,1;UBERON:0010259,5.13e-23,1;UBERON:0010359,5.13e-23,1;UBERON:0009526,5.13e-23,1;UBERON:0002397,5.13e-23,1;UBERON:0003113,5.13e-23,1;UBERON:0003277,5.13e-23,1;UBERON:0001709,5.13e-23,1;UBERON:0004066,5.13e-23,1;UBERON:0002244,5.13e-23,1;UBERON:0005620,5.13e-23,1;UBERON:0004362,5.13e-23,1;UBERON:0010364,5.13e-23,1;UBERON:0010046,5.13e-23,1;UBERON:0005868,5.13e-23,1;UBERON:0007238,5.13e-23,1;UBERON:0004288,5.13e-23,1;UBERON:0004068,5.13e-23,1;UBERON:0010334,5.13e-23,1;UBERON:0003852,5.13e-23,1;UBERON:0010253,5.13e-23,1;UBERON:0000165,3.83e-19,29;UBERON:0000930,3.83e-19,29;UBERON:0010323,1.32e-18,11;UBERON:0001758,1.13e-15,6;UBERON:0003672,1.13e-15,6;UBERON:0011137,8.86e-15,14;UBERON:0003129,1.40e-13,7;UBERON:0000075,5.08e-13,16;UBERON:0005253,3.24e-12,2;UBERON:0004089,3.24e-12,2;UBERON:0001828,4.67e-12,8;UBERON:0001444,2.01e-11,49;UBERON:0000033,5.14e-10,56;UBERON:0000166,1.12e-09,22;UBERON:0000153,4.64e-09,62;UBERON:0007811,4.64e-09,62;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0003102,5.30e-08,99;UBERON:0003729,8.89e-08,13;UBERON:0000415,9.11e-07,4;UBERON:0007240,9.11e-07,4;UBERON:0005742,9.11e-07,4;UBERON:0005734,9.11e-07,4;UBERON:0004664,9.11e-07,4;UBERON:0004663,9.11e-07,4;UBERON:0001708,9.63e-07,4;UBERON:0008895,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.421352420106746,2.85815839756851,0.245668634623536,0.619954687054593,0,1.48360157567134,0,0,1.0100166837244,0.500474079487857,3.60183350129438,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0.0974370051611986,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0.315404830067869,0.937131319941706,0,0,0,0,0,2.69339204851057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.509197589862076,0.212574920101683,0,0.558644917973244,0,0,0,1.05802783107205,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46219742103469,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.421352420106746,2.85815839756851,0.245668634623536,0.619954687054593,0,1.48360157567134,0,0,1.0100166837244,0.500474079487857,3.60183350129438,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0.0974370051611986,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0.315404830067869,0.937131319941706,0,0,0,0,0,2.69339204851057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.509197589862076,0.212574920101683,0,0.558644917973244,0,0,0,1.05802783107205,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46219742103469,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr18:59685444..59685459,- | |||
}} | }} |
Latest revision as of 01:44, 26 July 2015
Short description: | p@chr18:59685444..59685459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:59685444..59685459, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 1.67e-23 | 1 |
fibroblast of gingiva | 1.13e-18 | 5 |
fibroblast of periodontium | 1.13e-15 | 6 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
fibroblast | 2.04e-07 | 76 |
fibroblast of tunica adventitia of artery | 9.11e-07 | 4 |
fibroblast of the aortic adventitia | 9.11e-07 | 4 |