FFCP PHASE1:Mm9::chr13:100883951..100883993,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100883951..100883993,-|id=chr13:100883951..100883993,-|ontology_enrichment_celltype=CL:0000117!6.42e-10!23;CL:0000337!6.42e-10!23;CL:0000540!2.64e-07!33;CL:0000047!2.64e-07!33;CL:0000031!2.64e-07!33;CL:0000404!2.64e-07!33;CL:0000221!5.58e-07!44;CL:0000133!5.58e-07!44;CL:0002319!8.25e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-16,23;CL:0000337,4.41e-16,23;CL:0000540,1.36e-10,33;CL:0000047,1.36e-10,33;CL:0000031,1.36e-10,33;CL:0000404,1.36e-10,33;CL:0002319,7.27e-10,43;CL:0000221,1.70e-09,44;CL:0000133,1.70e-09,44;CL:0002609,1.78e-08,6;CL:0000393,4.09e-08,39;CL:0000211,4.09e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.59e-08,34;UBERON:0002346,8.87e-08,64;UBERON:0003075,8.87e-08,64;UBERON:0007284,8.87e-08,64;UBERON:0001017,1.74e-07,73;UBERON:0000991,1.78e-07,18;UBERON:0005564,1.78e-07,18;UBERON:0001049,2.50e-07,52;UBERON:0005068,2.50e-07,52;UBERON:0006241,2.50e-07,52;UBERON:0007135,2.50e-07,52;UBERON:0001016,4.39e-07,75;UBERON:0003056,5.62e-07,49;UBERON:0000073,7.78e-07,54|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0.319088635981346,0,0,0,0,0,0,0,0,4.59233766815777,1.68794617041505,1.82839852397255,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.816677425049476,0,0,0.523523743973798,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,2.34717403304412,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,7.93486468908049,5.07065122804943,1.0165335962074,0,0,0.988866362566974,0,1.19840044207362,1.53687322128622,1.65903379693564,3.78016627328734,2.52389953621658,0.856952953211411,2.42955395046775,3.06226998037385,1.34183659425531,2.75765635983006,0,0.127687338085188,0.614426133024974,4.2203612073662,2.65314166446988,1.04182674111352,1.95428099300967,1.12552522006336,0.45839474333043,1.76777151284201,2.13557521198654,2.42319279572891,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0,0,0.842666520790511,0.340860645156116,0.779358013808606,2.12003744706204,0.704217098883403,0,0,0,0.865964164044856,0,3.0331466700887,0.5709193985953,0,0.148442139064825,1.21439728736295,1.21786191324856,0.922461989024234,0.904335843315735,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0.359445373517761,0,0,0,0,1.7591609295801,0,0.255715457330331,0.41557608911912,0.324482526135515,0.712875546952214,0.373220911830279,1.0108910337347,0.210441855886474,1.17108398666433,3.90833577536904,0.900310649026746,1.80845781402858,0.204109497453984,0.384341160854549,1.49922759295566,0,0.431135985865684,0,0.351902248327898,1.09597866213787,1.11218899690239,0,0.61734640922383,1.59227413454795,0,0,0,0.207125772535502,1.17263029990548,1.44049649168812,0.946978942340841,1.18058539048442,1.54267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,1.02904612379284,0,0,0.853153002140936,0.928946687441754,0.644337306610467,0,0.22237804384487,0.760902504450237,1.42358718463353,0.329397909448022,1.00534083520108,0.198956472041151,0.779856348476481,0,0.432276099749388,0.995706366271836,0.569003702859245,1.37098215131675,1.1270773567308,1.83286195060783,0.581857461502877,0.420814919341911,0.442655759869801,0,0.627994911365499,0.123397163921801,0,0.667380422864376,0,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0,2.65287976478679,0.651859905768103,1.18821560042632,0.938760993154008,0.167506257441816,0.476087281772027,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,1.11399337041197,0.849229592366497,0,0.584511715822624,0.395287777946524,0.642642632843614,0.141940085208269,1.24645922567079,1.14020871547503,0.164970122972535,1.32745138339963,1.45668381692989,1.81394134178851,0.565815239267694,0.590603785761546,0,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.44048875225048,1.16422815404479,1.71469628025274,0.532020700926821,1.07021290561242,0.493647061806363,0,0.23467170806371,1.0591603543191,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0.619160603889667,0.370389054739423,0,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0.790839983952838,0.609958401380546,0.972048067396211,0.209088296014469,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0.621339313086926,33.2578833823672,1.04661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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100883951..100883993,- | |||
|description=CAGE_peak_at_chr13:100883951..100883993,- | |||
|id=chr13:100883951..100883993,- | |||
|ontology_enrichment_celltype=CL:0000117!6.42e-10!23;CL:0000337!6.42e-10!23;CL:0000540!2.64e-07!33;CL:0000047!2.64e-07!33;CL:0000031!2.64e-07!33;CL:0000404!2.64e-07!33;CL:0000221!5.58e-07!44;CL:0000133!5.58e-07!44;CL:0002319!8.25e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-16,23;CL:0000337,4.41e-16,23;CL:0000540,1.36e-10,33;CL:0000047,1.36e-10,33;CL:0000031,1.36e-10,33;CL:0000404,1.36e-10,33;CL:0002319,7.27e-10,43;CL:0000221,1.70e-09,44;CL:0000133,1.70e-09,44;CL:0002609,1.78e-08,6;CL:0000393,4.09e-08,39;CL:0000211,4.09e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.59e-08,34;UBERON:0002346,8.87e-08,64;UBERON:0003075,8.87e-08,64;UBERON:0007284,8.87e-08,64;UBERON:0001017,1.74e-07,73;UBERON:0000991,1.78e-07,18;UBERON:0005564,1.78e-07,18;UBERON:0001049,2.50e-07,52;UBERON:0005068,2.50e-07,52;UBERON:0006241,2.50e-07,52;UBERON:0007135,2.50e-07,52;UBERON:0001016,4.39e-07,75;UBERON:0003056,5.62e-07,49;UBERON:0000073,7.78e-07,54 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0.319088635981346,0,0,0,0,0,0,0,0,4.59233766815777,1.68794617041505,1.82839852397255,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.816677425049476,0,0,0.523523743973798,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,2.34717403304412,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,3.43937983461316,7.93486468908049,5.07065122804943,1.0165335962074,0,0,0.988866362566974,0,1.19840044207362,1.53687322128622,1.65903379693564,3.78016627328734,2.52389953621658,0.856952953211411,2.42955395046775,3.06226998037385,1.34183659425531,2.75765635983006,0,0.127687338085188,0.614426133024974,4.2203612073662,2.65314166446988,1.04182674111352,1.95428099300967,1.12552522006336,0.45839474333043,1.76777151284201,2.13557521198654,2.42319279572891,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0,0,0.842666520790511,0.340860645156116,0.779358013808606,2.12003744706204,0.704217098883403,0,0,0,0.865964164044856,0,3.0331466700887,0.5709193985953,0,0.148442139064825,1.21439728736295,1.21786191324856,0.922461989024234,0.904335843315735,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0.359445373517761,0,0,0,0,1.7591609295801,0,0.255715457330331,0.41557608911912,0.324482526135515,0.712875546952214,0.373220911830279,1.0108910337347,0.210441855886474,1.17108398666433,3.90833577536904,0.900310649026746,1.80845781402858,0.204109497453984,0.384341160854549,1.49922759295566,0,0.431135985865684,0,0.351902248327898,1.09597866213787,1.11218899690239,0,0.61734640922383,1.59227413454795,0,0,0,0.207125772535502,1.17263029990548,1.44049649168812,0.946978942340841,1.18058539048442,1.54267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0.493679549740441,0,0.0810688095458557,0.438599962275997,0.439100230582101,0.268412837520744,0.210289948564127,1.02904612379284,0,0,0.853153002140936,0.928946687441754,0.644337306610467,0,0.22237804384487,0.760902504450237,1.42358718463353,0.329397909448022,1.00534083520108,0.198956472041151,0.779856348476481,0,0.432276099749388,0.995706366271836,0.569003702859245,1.37098215131675,1.1270773567308,1.83286195060783,0.581857461502877,0.420814919341911,0.442655759869801,0,0.627994911365499,0.123397163921801,0,0.667380422864376,0,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0,0,0.252578877947112,0.358794827043824,0.482443521363367,0,2.65287976478679,0.651859905768103,1.18821560042632,0.938760993154008,0.167506257441816,0.476087281772027,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,1.11399337041197,0.849229592366497,0,0.584511715822624,0.395287777946524,0.642642632843614,0.141940085208269,1.24645922567079,1.14020871547503,0.164970122972535,1.32745138339963,1.45668381692989,1.81394134178851,0.565815239267694,0.590603785761546,0,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.44048875225048,1.16422815404479,1.71469628025274,0.532020700926821,1.07021290561242,0.493647061806363,0,0.23467170806371,1.0591603543191,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0.619160603889667,0.370389054739423,0,0,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0.790839983952838,0.609958401380546,0.972048067396211,0.209088296014469,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0.621339313086926,33.2578833823672,1.04661582230785,1.15820943319968,1.16670713006429,1.6790777052105,1.68956125490778,1.05621514781179,0.781226309063701,0.314578033277133,14.0118790079084,14.4015003128933,0.316011120628178,1.01362607645082,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,1.20297227640581,0,0,0,0.45032120322422,0,0,2.28332164685189,0,0.682934423016537,0.243106717068294,1.25767897576789,0.919217542250071,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.936415074698824,0.704276676453562,0.402048282689293,0.952587382566147,0.463537303779422,0.38581844092741,1.23625770240992,0.147198920134397,0,0.70990322463735,1.1921809497366,0.872078499793971,0.941093804153306,0.592302255241736,0.548783918618318,0,0.271608227691724,0,0.593175090620871,0.689531376628944,0.409231043169689,0.464810523557898,0.385813221962283,0.499621155875892,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr13:100883951..100883993,- | |||
}} |
Latest revision as of 12:42, 5 August 2015
Short description: | p@chr13:100883951..100883993, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100883951..100883993, - |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.41e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.41e-16 | 23 |
neuron | 1.36e-10 | 33 |
neuronal stem cell | 1.36e-10 | 33 |
neuroblast | 1.36e-10 | 33 |
electrically signaling cell | 1.36e-10 | 33 |
neural cell | 7.27e-10 | 43 |
ectodermal cell | 1.70e-09 | 44 |
neurectodermal cell | 1.70e-09 | 44 |
neuron of cerebral cortex | 1.78e-08 | 6 |
electrically responsive cell | 4.09e-08 | 39 |
electrically active cell | 4.09e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.59e-08 | 34 |
neurectoderm | 8.87e-08 | 64 |
neural plate | 8.87e-08 | 64 |
presumptive neural plate | 8.87e-08 | 64 |
central nervous system | 1.74e-07 | 73 |
gonad | 1.78e-07 | 18 |
gonad primordium | 1.78e-07 | 18 |
neural tube | 2.50e-07 | 52 |
neural rod | 2.50e-07 | 52 |
future spinal cord | 2.50e-07 | 52 |
neural keel | 2.50e-07 | 52 |
nervous system | 4.39e-07 | 75 |
pre-chordal neural plate | 5.62e-07 | 49 |
regional part of nervous system | 7.78e-07 | 54 |