FFCP PHASE2:Hg19::chrX:50557095..50557207,-
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Short description: | p1@SHROOM4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHROOM4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -51bp_to_ENST00000376020, NM_020717, NR_027121, uc004dpd.3, uc004dpe.2_5end |
EntrezGene: | SHROOM4 |
HGNC: | 29215 |
UniProt: | Q9ULL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SHROOM4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell of vascular tree | 2.71e-16 | 24 |
endothelial cell | 1.92e-14 | 36 |
blood vessel endothelial cell | 4.19e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.19e-13 | 18 |
meso-epithelial cell | 1.15e-12 | 45 |
mesodermal cell | 1.14e-08 | 121 |
endothelial cell of artery | 1.57e-07 | 9 |
lining cell | 6.70e-07 | 58 |
barrier cell | 6.70e-07 | 58 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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tube | 6.49e-38 | 192 |
anatomical conduit | 5.26e-37 | 240 |
neural plate | 3.91e-28 | 82 |
presumptive neural plate | 3.91e-28 | 82 |
neural tube | 4.54e-27 | 56 |
neural rod | 4.54e-27 | 56 |
future spinal cord | 4.54e-27 | 56 |
neural keel | 4.54e-27 | 56 |
neurectoderm | 1.86e-25 | 86 |
epithelium | 9.20e-25 | 306 |
Showing 1 to 10 of 79 entries