FFCP PHASE1:Hg19::chr10:105314881..105314945,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9148|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7761|TSSclassifier=S|UniProt=|association_with_transcript=-43bp_to_ENST00000437579_5end|coexpression_cluster_id=C2975|description=CAGE_peak_3_at_NEURL_5end|id=chr10:105314881..105314945,+|ontology_enrichment_celltype=CL:0002057!3.85e-22!42;CL:0000860!2.12e-19!45;CL:0000557!6.42e-11!71;CL:0002009!1.24e-10!65;CL:0000766!2.58e-10!76;CL:0002194!2.83e-10!63;CL:0000576!2.83e-10!63;CL:0000040!2.83e-10!63;CL:0000559!2.83e-10!63;CL:0000839!3.56e-10!70;CL:0002393!2.82e-08!9;CL:0002397!2.82e-08!9|ontology_enrichment_celltype_v019=CL:0000860;2.40e-15;33!CL:0002057;2.40e-15;33!CL:0000576;1.28e-13;48!CL:0000473;6.99e-10;39!CL:0000234;6.99e-10;39!CL:0000766;6.47e-09;69!CL:0002393;3.83e-08;6!CL:0002397;3.83e-08;6|ontology_enrichment_celltype_v019_2=CL:0000860,9.88e-26,42;CL:0002057,9.88e-26,42;CL:0000473,4.95e-21,48;CL:0000234,4.95e-21,48;CL:0000766,1.97e-15,72;CL:0000839,1.37e-14,66;CL:0002194,1.39e-14,59;CL:0000576,1.39e-14,59;CL:0000040,1.39e-14,59;CL:0000559,1.39e-14,59;CL:0000557,3.31e-14,67;CL:0002009,9.11e-14,61;CL:0002393,3.15e-12,9;CL:0002397,3.15e-12,9;CL:0000763,3.65e-07,108;CL:0000049,3.65e-07,108|ontology_enrichment_development_v019=CL:0002057;2.73e-18;42!UBERON:0006601;7.16e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.76e-32!115;UBERON:0001049!1.18e-23!57;UBERON:0005068!1.18e-23!57;UBERON:0006241!1.18e-23!57;UBERON:0007135!1.18e-23!57;UBERON:0002780!1.22e-22!41;UBERON:0001890!1.22e-22!41;UBERON:0006240!1.22e-22!41;UBERON:0003080!1.16e-21!42;UBERON:0000955!4.62e-20!69;UBERON:0006238!4.62e-20!69;UBERON:0002616!5.38e-20!59;UBERON:0001893!4.94e-19!34;UBERON:0001869!6.42e-19!32;UBERON:0002020!6.47e-19!34;UBERON:0003528!6.47e-19!34;UBERON:0002791!2.95e-18!33;UBERON:0002619!3.89e-18!22;UBERON:0001017!8.28e-18!82;UBERON:0005743!7.29e-17!86;UBERON:0001950!8.30e-17!20;UBERON:0000073!9.36e-17!94;UBERON:0001016!9.36e-17!94;UBERON:0003075!5.21e-15!86;UBERON:0007284!5.21e-15!86;UBERON:0000956!1.16e-14!25;UBERON:0000203!1.16e-14!25;UBERON:0002346!2.94e-14!90;UBERON:0003056!5.08e-14!61;UBERON:0000062!4.69e-12!511;UBERON:0000153!6.74e-10!129;UBERON:0007811!6.74e-10!129;UBERON:0000033!1.34e-09!123;UBERON:0000922!2.56e-09!612;UBERON:0000468!7.57e-09!659;UBERON:0002390!7.94e-09!102;UBERON:0003061!7.94e-09!102;UBERON:0001474!1.95e-08!86;UBERON:0002050!6.89e-08!605;UBERON:0005423!6.89e-08!605;UBERON:0002371!7.11e-08!80;UBERON:0000467!7.92e-08!625;UBERON:0004121!8.68e-08!169;UBERON:0000480!1.05e-07!626;UBERON:0000923!1.29e-07!604;UBERON:0005291!1.29e-07!604;UBERON:0006598!1.29e-07!604;UBERON:0002532!1.29e-07!604;UBERON:0000924!1.47e-07!173;UBERON:0006601!1.47e-07!173;UBERON:0001871!2.26e-07!7;UBERON:0002193!3.91e-07!112|ontology_enrichment_uberon_v019=UBERON:0002619;6.11e-28;22!UBERON:0001869;2.51e-27;32!UBERON:0001950;7.71e-26;20!UBERON:0003528;1.49e-25;34!UBERON:0002020;1.49e-25;34!UBERON:0002791;2.18e-25;32!UBERON:0001893;3.00e-24;34!UBERON:0000956;1.08e-23;25!UBERON:0000203;1.08e-23;25!UBERON:0002780;1.80e-22;41!UBERON:0001890;1.80e-22;41!UBERON:0000073;1.34e-18;53!UBERON:0002616;1.34e-18;53!UBERON:0000955;1.03e-13;68!UBERON:0001017;6.09e-12;75!UBERON:0001016;2.13e-10;83!UBERON:0001871;1.54e-09;6!UBERON:0000200;7.94e-09;6!UBERON:0007023;1.86e-08;114!UBERON:0002420;2.95e-08;9!UBERON:0007245;2.95e-08;9!UBERON:0010009;2.95e-08;9!UBERON:0010011;2.95e-08;9!UBERON:0000454;2.95e-08;9!UBERON:0002021;2.21e-07;5!UBERON:0000349;2.29e-07;5!UBERON:0001872;2.53e-07;5!UBERON:0000125;2.87e-07;9!UBERON:0002308;2.87e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.31e-34,53;UBERON:0002616,2.31e-34,53;UBERON:0001049,3.52e-33,56;UBERON:0005068,3.52e-33,56;UBERON:0006241,3.52e-33,56;UBERON:0007135,3.52e-33,56;UBERON:0002780,7.35e-31,41;UBERON:0001890,7.35e-31,41;UBERON:0003080,7.35e-31,41;UBERON:0006240,7.35e-31,41;UBERON:0001869,1.74e-30,32;UBERON:0007023,6.38e-30,114;UBERON:0003528,1.63e-29,34;UBERON:0002020,1.63e-29,34;UBERON:0001893,4.38e-28,34;UBERON:0002791,5.24e-28,32;UBERON:0002619,6.49e-28,22;UBERON:0000955,1.51e-27,68;UBERON:0006238,1.51e-27,68;UBERON:0001950,8.55e-26,20;UBERON:0000956,1.14e-23,25;UBERON:0000203,1.14e-23,25;UBERON:0001016,3.22e-23,89;UBERON:0001017,4.61e-23,81;UBERON:0003075,5.03e-20,82;UBERON:0007284,5.03e-20,82;UBERON:0003056,3.94e-19,61;UBERON:0002346,2.11e-18,86;UBERON:0010371,3.88e-15,104;UBERON:0002371,2.98e-11,76;UBERON:0002390,1.06e-10,98;UBERON:0003061,1.06e-10,98;UBERON:0011216,6.75e-10,223;UBERON:0010314,7.89e-10,132;UBERON:0001474,1.11e-09,82;UBERON:0002050,1.27e-09,564;UBERON:0001871,1.41e-09,6;UBERON:0004121,1.59e-09,171;UBERON:0000924,1.59e-09,171;UBERON:0006601,1.59e-09,171;UBERON:0000923,1.70e-09,560;UBERON:0010316,1.70e-09,560;UBERON:0005291,1.70e-09,560;UBERON:0006598,1.70e-09,560;UBERON:0010317,1.70e-09,560;UBERON:0002532,1.70e-09,560;UBERON:0000922,5.07e-09,592;UBERON:0000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-43bp_to_ENST00000437579_5end | |||
|coexpression_cluster_id=C2975 | |||
|description=CAGE_peak_3_at_NEURL_5end | |||
|id=chr10:105314881..105314945,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.85e-22!42;CL:0000860!2.12e-19!45;CL:0000557!6.42e-11!71;CL:0002009!1.24e-10!65;CL:0000766!2.58e-10!76;CL:0002194!2.83e-10!63;CL:0000576!2.83e-10!63;CL:0000040!2.83e-10!63;CL:0000559!2.83e-10!63;CL:0000839!3.56e-10!70;CL:0002393!2.82e-08!9;CL:0002397!2.82e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-15;33!CL:0002057;2.40e-15;33!CL:0000576;1.28e-13;48!CL:0000473;6.99e-10;39!CL:0000234;6.99e-10;39!CL:0000766;6.47e-09;69!CL:0002393;3.83e-08;6!CL:0002397;3.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.88e-26,42;CL:0002057,9.88e-26,42;CL:0000473,4.95e-21,48;CL:0000234,4.95e-21,48;CL:0000766,1.97e-15,72;CL:0000839,1.37e-14,66;CL:0002194,1.39e-14,59;CL:0000576,1.39e-14,59;CL:0000040,1.39e-14,59;CL:0000559,1.39e-14,59;CL:0000557,3.31e-14,67;CL:0002009,9.11e-14,61;CL:0002393,3.15e-12,9;CL:0002397,3.15e-12,9;CL:0000763,3.65e-07,108;CL:0000049,3.65e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-18;42!UBERON:0006601;7.16e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@NEURL | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p3@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NEURL_5end |
Coexpression cluster: | C2975_CD14CD16_CD14_smallcell_cerebellum_eye_pineal_merkel |
Association with transcript: | -43bp_to_ENST00000437579_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.88e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.88e-26 | 42 |
defensive cell | 4.95e-21 | 48 |
phagocyte | 4.95e-21 | 48 |
myeloid leukocyte | 1.97e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.37e-14 | 66 |
monopoietic cell | 1.39e-14 | 59 |
monocyte | 1.39e-14 | 59 |
monoblast | 1.39e-14 | 59 |
promonocyte | 1.39e-14 | 59 |
granulocyte monocyte progenitor cell | 3.31e-14 | 67 |
macrophage dendritic cell progenitor | 9.11e-14 | 61 |
intermediate monocyte | 3.15e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.15e-12 | 9 |
myeloid cell | 3.65e-07 | 108 |
common myeloid progenitor | 3.65e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.