FFCP PHASE1:Hg19::chr17:73028676..73028706,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23510|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21294|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc010dfy.1,uc010dfz.2_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_KCTD2_5end|id=chr17:73028676..73028706,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;5.65e-17;82!UBERON:0006215;9.07e-17;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.67e-41!57;UBERON:0005068!7.67e-41!57;UBERON:0006241!7.67e-41!57;UBERON:0007135!7.67e-41!57;UBERON:0000955!1.76e-35!69;UBERON:0006238!1.76e-35!69;UBERON:0001017!1.12e-33!82;UBERON:0002616!2.11e-33!59;UBERON:0000073!4.72e-33!94;UBERON:0001016!4.72e-33!94;UBERON:0005743!1.15e-32!86;UBERON:0002780!7.65e-32!41;UBERON:0001890!7.65e-32!41;UBERON:0006240!7.65e-32!41;UBERON:0003080!9.29e-31!42;UBERON:0007023!1.15e-28!115;UBERON:0003075!6.24e-28!86;UBERON:0007284!6.24e-28!86;UBERON:0002346!7.19e-27!90;UBERON:0001893!1.03e-24!34;UBERON:0002020!1.41e-24!34;UBERON:0003528!1.41e-24!34;UBERON:0002791!1.29e-23!33;UBERON:0001869!1.98e-22!32;UBERON:0003056!1.54e-19!61;UBERON:0002619!4.01e-19!22;UBERON:0004121!3.97e-18!169;UBERON:0000033!5.43e-18!123;UBERON:0000924!8.05e-18!173;UBERON:0006601!8.05e-18!173;UBERON:0000956!1.85e-17!25;UBERON:0000203!1.85e-17!25;UBERON:0001950!3.05e-17!20;UBERON:0000153!4.42e-17!129;UBERON:0007811!4.42e-17!129;UBERON:0003076!5.50e-11!15;UBERON:0003057!5.50e-11!15;UBERON:0000025!1.04e-09!194;UBERON:0000062!1.40e-09!511;UBERON:0004732!1.43e-09!13;UBERON:0000064!2.41e-09!219;UBERON:0001894!1.01e-08!7;UBERON:0006222!1.01e-08!7;UBERON:0002308!1.26e-08!9;UBERON:0000125!1.26e-08!9;UBERON:0002420!1.64e-08!9;UBERON:0007245!1.64e-08!9;UBERON:0010009!1.64e-08!9;UBERON:0010011!1.64e-08!9;UBERON:0000454!1.64e-08!9;UBERON:0004733!1.75e-08!12;UBERON:0002028!1.75e-08!12;UBERON:0007277!1.75e-08!12;UBERON:0002298!2.76e-08!8;UBERON:0004111!7.30e-08!241;UBERON:0000475!2.06e-07!365;UBERON:0000483!3.66e-07!309;UBERON:0001872!4.96e-07!5;UBERON:0000119!6.88e-07!312|ontology_enrichment_uberon_v019=UBERON:0000073;1.42e-40;53!UBERON:0002616;1.42e-40;53!UBERON:0004732;1.32e-37;13!UBERON:0004733;3.85e-33;12!UBERON:0002028;3.85e-33;12!UBERON:0002780;5.80e-30;41!UBERON:0001890;5.80e-30;41!UBERON:0002298;1.06e-29;6!UBERON:0001893;1.03e-27;34!UBERON:0003528;3.06e-26;34!UBERON:0002020;3.06e-26;34!UBERON:0001016;8.97e-25;83!UBERON:0000955;9.13e-24;68!UBERON:0001017;1.29e-23;75!UBERON:0001869;5.02e-22;32!UBERON:0002791;2.00e-21;32!UBERON:0001950;7.10e-21;20!UBERON:0002680;5.50e-20;9!UBERON:0001895;5.50e-20;9!UBERON:0002619;6.67e-19;22!UBERON:0000125;8.00e-19;9!UBERON:0002308;8.00e-19;9!UBERON:0000956;1.64e-16;25!UBERON:0000203;1.64e-16;25!UBERON:0001896;3.35e-16;3!UBERON:0005290;3.35e-16;3!UBERON:0001872;1.55e-15;5!UBERON:0000988;2.74e-15;3!UBERON:0007023;5.54e-13;114!UBERON:0002784;3.36e-12;4!UBERON:0001894;9.08e-12;7!UBERON:0005162;2.00e-11;2!UBERON:0000122;2.00e-11;2!UBERON:0001905;2.27e-11;2!UBERON:0002757;2.27e-11;2!UBERON:0010134;2.27e-11;2!UBERON:0005408;2.27e-11;2!UBERON:0001899;2.27e-11;2!UBERON:0009663;2.56e-11;7!UBERON:0002148;1.48e-10;2!UBERON:0001875;1.48e-10;2!UBERON:0006331;1.48e-10;2!UBERON:0009662;1.48e-10;2!UBERON:0006514;1.48e-10;2!UBERON:0002021;3.49e-09;5!UBERON:0002420;7.95e-09;9!UBERON:0007245;7.95e-09;9!UBERON:0010009;7.95e-09;9!UBERON:0010011;7.95e-09;9!UBERON:0000454;7.95e-09;9!UBERON:0002037;1.33e-08;6!UBERON:0011216;4.65e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.65e-71,56;UBERON:0005068,2.65e-71,56;UBERON:0006241,2.65e-71,56;UBERON:0007135,2.65e-71,56;UBERON:0000073,1.66e-70,53;UBERON:0002616,1.66e-70,53;UBERON:0000955,3.18e-61,68;UBERON:0006238,3.18e-61,68;UBERON:0001016,4.02e-55,89;UBERON:0001017,3.84e-54,81;UBERON:0003075,1.62e-50,82;UBERON:0007284,1.62e-50,82;UBERON:0002346,6.86e-48,86;UBERON:0002780,1.58e-41,41;UBERON:0001890,1.58e-41,41;UBERON:0003080,1.58e-41,41;UBERON:0006240,1.58e-41,41;UBERON:0010371,1.84e-41,104;UBERON:0004732,1.21e-37,13;UBERON:0004733,3.75e-33,12;UBERON:0002028,3.75e-33,12;UBERON:0007277,3.75e-33,12;UBERON:0007023,1.28e-32,114;UBERON:0003076,4.40e-32,15;UBERON:0003057,4.40e-32,15;UBERON:0001893,1.42e-31,34;UBERON:0003528,2.96e-31,34;UBERON:0002020,2.96e-31,34;UBERON:0002298,1.01e-29,6;UBERON:0003056,1.02e-29,61;UBERON:0004121,1.14e-29,171;UBERON:0000924,1.14e-29,171;UBERON:0006601,1.14e-29,171;UBERON:0010314,4.92e-29,132;UBERON:0002791,2.84e-25,32;UBERON:0001869,3.20e-25,32;UBERON:0001950,6.39e-21,20;UBERON:0002680,5.81e-20,9;UBERON:0001895,5.81e-20,9;UBERON:0010092,5.81e-20,9;UBERON:0011216,1.24e-19,223;UBERON:0002619,6.07e-19,22;UBERON:0000125,1.43e-18,9;UBERON:0002308,1.43e-18,9;UBERON:0000025,5.89e-18,192;UBERON:0000956,1.51e-16,25;UBERON:0000203,1.51e-16,25;UBERON:0001896,2.97e-16,3;UBERON:0005290,2.97e-16,3;UBERON:00100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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23510 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21294 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010dfy.1,uc010dfz.2_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_KCTD2_5end | |||
|id=chr17:73028676..73028706,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.65e-17;82!UBERON:0006215;9.07e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.67e-41!57;UBERON:0005068!7.67e-41!57;UBERON:0006241!7.67e-41!57;UBERON:0007135!7.67e-41!57;UBERON:0000955!1.76e-35!69;UBERON:0006238!1.76e-35!69;UBERON:0001017!1.12e-33!82;UBERON:0002616!2.11e-33!59;UBERON:0000073!4.72e-33!94;UBERON:0001016!4.72e-33!94;UBERON:0005743!1.15e-32!86;UBERON:0002780!7.65e-32!41;UBERON:0001890!7.65e-32!41;UBERON:0006240!7.65e-32!41;UBERON:0003080!9.29e-31!42;UBERON:0007023!1.15e-28!115;UBERON:0003075!6.24e-28!86;UBERON:0007284!6.24e-28!86;UBERON:0002346!7.19e-27!90;UBERON:0001893!1.03e-24!34;UBERON:0002020!1.41e-24!34;UBERON:0003528!1.41e-24!34;UBERON:0002791!1.29e-23!33;UBERON:0001869!1.98e-22!32;UBERON:0003056!1.54e-19!61;UBERON:0002619!4.01e-19!22;UBERON:0004121!3.97e-18!169;UBERON:0000033!5.43e-18!123;UBERON:0000924!8.05e-18!173;UBERON:0006601!8.05e-18!173;UBERON:0000956!1.85e-17!25;UBERON:0000203!1.85e-17!25;UBERON:0001950!3.05e-17!20;UBERON:0000153!4.42e-17!129;UBERON:0007811!4.42e-17!129;UBERON:0003076!5.50e-11!15;UBERON:0003057!5.50e-11!15;UBERON:0000025!1.04e-09!194;UBERON:0000062!1.40e-09!511;UBERON:0004732!1.43e-09!13;UBERON:0000064!2.41e-09!219;UBERON:0001894!1.01e-08!7;UBERON:0006222!1.01e-08!7;UBERON:0002308!1.26e-08!9;UBERON:0000125!1.26e-08!9;UBERON:0002420!1.64e-08!9;UBERON:0007245!1.64e-08!9;UBERON:0010009!1.64e-08!9;UBERON:0010011!1.64e-08!9;UBERON:0000454!1.64e-08!9;UBERON:0004733!1.75e-08!12;UBERON:0002028!1.75e-08!12;UBERON:0007277!1.75e-08!12;UBERON:0002298!2.76e-08!8;UBERON:0004111!7.30e-08!241;UBERON:0000475!2.06e-07!365;UBERON:0000483!3.66e-07!309;UBERON:0001872!4.96e-07!5;UBERON:0000119!6.88e-07!312 | |||
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| |||
|short_description=p3@KCTD2 | |||
}} |
Revision as of 15:36, 11 September 2013
Short description: | p3@KCTD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCTD2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_uc010dfy.1, uc010dfz.2_5end |
EntrezGene: | KCTD2 |
HGNC: | 21294 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.