FFCP PHASE1:Hg19::chr8:9764145..9764235,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2673|description=CAGE_peak_at_chr8:9764145..9764235,-|id=chr8:9764145..9764235,-|ontology_enrichment_celltype=CL:0000047!4.77e-12!8;CL:0000540!1.26e-09!6;CL:0000031!1.26e-09!6;CL:0000404!1.26e-09!6;CL:0002322!6.79e-09!5|ontology_enrichment_celltype_v019=CL:0000540;9.67e-16;6!CL:0000404;9.67e-16;6!CL:0002322;1.71e-14;5!CL:0002321;1.97e-08;15|ontology_enrichment_celltype_v019_2=CL:0000047,6.59e-16,8;CL:0000540,1.06e-15,6;CL:0000031,1.06e-15,6;CL:0000404,1.06e-15,6;CL:0002322,2.02e-14,5|ontology_enrichment_development_v019=CL:0000031;9.67e-16;6!UBERON:0006601;2.06e-13;82!UBERON:0006215;2.11e-10;3!UBERON:0003056;1.89e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.30e-57!82;UBERON:0000073!1.14e-56!94;UBERON:0001016!1.14e-56!94;UBERON:0005743!8.15e-56!86;UBERON:0001049!9.38e-51!57;UBERON:0005068!9.38e-51!57;UBERON:0006241!9.38e-51!57;UBERON:0007135!9.38e-51!57;UBERON:0002616!8.08e-42!59;UBERON:0000955!5.79e-41!69;UBERON:0006238!5.79e-41!69;UBERON:0003075!8.84e-40!86;UBERON:0007284!8.84e-40!86;UBERON:0002780!6.06e-39!41;UBERON:0001890!6.06e-39!41;UBERON:0006240!6.06e-39!41;UBERON:0003080!9.51e-38!42;UBERON:0002346!3.14e-37!90;UBERON:0002020!6.27e-35!34;UBERON:0003528!6.27e-35!34;UBERON:0001893!9.75e-35!34;UBERON:0002791!2.51e-33!33;UBERON:0001869!1.36e-32!32;UBERON:0003056!6.64e-31!61;UBERON:0001950!4.98e-28!20;UBERON:0002619!8.04e-28!22;UBERON:0004121!2.15e-26!169;UBERON:0007023!3.92e-26!115;UBERON:0000924!2.63e-25!173;UBERON:0006601!2.63e-25!173;UBERON:0000956!9.11e-24!25;UBERON:0000203!9.11e-24!25;UBERON:0000033!1.69e-22!123;UBERON:0000153!1.07e-20!129;UBERON:0007811!1.07e-20!129;UBERON:0003076!1.09e-13!15;UBERON:0003057!1.09e-13!15;UBERON:0002308!9.55e-13!9;UBERON:0000125!9.55e-13!9;UBERON:0002420!1.74e-12!9;UBERON:0007245!1.74e-12!9;UBERON:0010009!1.74e-12!9;UBERON:0010011!1.74e-12!9;UBERON:0000454!1.74e-12!9;UBERON:0004732!2.05e-11!13;UBERON:0004733!2.88e-10!12;UBERON:0002028!2.88e-10!12;UBERON:0007277!2.88e-10!12;UBERON:0000200!3.70e-10!6;UBERON:0009663!4.86e-10!7;UBERON:0001871!1.32e-09!7;UBERON:0002298!4.81e-09!8;UBERON:0001872!6.79e-09!5;UBERON:0002021!7.72e-09!5;UBERON:0000025!4.49e-08!194;UBERON:0000369!7.24e-07!4;UBERON:0002435!7.24e-07!4;UBERON:0000204!7.24e-07!4;UBERON:0010082!7.24e-07!4|ontology_enrichment_uberon_v019=UBERON:0002619;4.59e-44;22!UBERON:0001950;6.46e-44;20!UBERON:0001869;4.64e-41;32!UBERON:0003528;2.73e-40;34!UBERON:0002020;2.73e-40;34!UBERON:0000956;2.51e-38;25!UBERON:0000203;2.51e-38;25!UBERON:0002791;5.91e-38;32!UBERON:0001893;1.09e-37;34!UBERON:0002780;3.66e-32;41!UBERON:0001890;3.66e-32;41!UBERON:0000073;6.36e-32;53!UBERON:0002616;6.36e-32;53!UBERON:0000955;7.48e-26;68!UBERON:0001017;6.85e-24;75!UBERON:0001016;6.68e-22;83!UBERON:0000200;1.40e-16;6!UBERON:0004732;2.14e-16;13!UBERON:0001872;1.76e-14;5!UBERON:0004733;1.90e-14;12!UBERON:0002028;1.90e-14;12!UBERON:0002021;2.67e-14;5!UBERON:0002298;1.92e-11;6!UBERON:0002680;2.07e-11;9!UBERON:0001895;2.07e-11;9!UBERON:0000369;9.36e-11;4!UBERON:0002435;9.36e-11;4!UBERON:0000204;9.36e-11;4!UBERON:0000125;3.91e-10;9!UBERON:0002308;3.91e-10;9!UBERON:0001871;1.06e-09;6!UBERON:0007023;3.66e-09;114!UBERON:0001870;5.89e-09;3!UBERON:0000988;7.34e-09;3!UBERON:0005383;2.28e-08;3!UBERON:0005382;2.28e-08;3!UBERON:0011216;2.77e-08;132!UBERON:0001905;2.24e-07;2!UBERON:0002757;2.24e-07;2!UBERON:0010134;2.24e-07;2!UBERON:0005408;2.24e-07;2!UBERON:0001899;2.24e-07;2!UBERON:0002784;2.80e-07;4!UBERON:0002420;4.45e-07;9!UBERON:0007245;4.45e-07;9!UBERON:0010009;4.45e-07;9!UBERON:0010011;4.45e-07;9!UBERON:0000454;4.45e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.04e-73,89;UBERON:0001017,2.03e-72,81;UBERON:0001049,1.30e-61,56;UBERON:0005068,1.30e-61,56;UBERON:0006241,1.30e-61,56;UBERON:0007135,1.30e-61,56;UBERON:0000073,8.72e-59,53;UBERON:0002616,8.72e-59,53;UBERON:0000955,1.59e-54,68;UBERON:0006238,1.59e-54,68;UBERON:0003528,4.65e-47,34;UBERON:0002020,4.65e-47,34;UBERON:0003075,1.31e-46,82;UBERON:0007284,1.31e-46,82;UBERON:0001869,2.01e-46,32;UBERON:0002780,4.43e-45,41;UBERON:0001890,4.43e-45,41;UBERON:0003080,4.43e-45,41;UBERON:0006240,4.43e-45,41;UBERON:0002619,3.76e-44,22;UBERON:0001950,5.65e-44,20;UBERON:0002346,6.00e-44,86;UBERON:0001893,2.32e-43,34;UBERON:0002791,1.68e-42,32;UBERON:0000956,2.11e-38,25;UBERON:0000203,2.11e-38,25;UBERON:0003056,2.05e-35,61;UBERON:0010371,1.71e-34,104;UBERON:0004121,7.30e-34,171;UBERON:0000924,7.30e-34,171;UBERON:0006601,7.30e-34,171;UBERON:0007023,3.65e-27,114;UBERON:0010314,1.89e-26,132;UBERON:0011216,3.09e-25,223;UBERON:0003076,5.53e-17,15;UBERON:0003057,5.53e-17,15;UBERON:0000200,1.24e-16,6;UBERON:0004732,2.27e-16,13;UBERON:0001872,2.02e-14,5;UBERON:0004733,2.02e-14,12;UBERON:0002028,2.02e-14,12;UBERON:0007277,2.02e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2673 | |||
|description=CAGE_peak_at_chr8:9764145..9764235,- | |||
|id=chr8:9764145..9764235,- | |||
|ontology_enrichment_celltype=CL:0000047!4.77e-12!8;CL:0000540!1.26e-09!6;CL:0000031!1.26e-09!6;CL:0000404!1.26e-09!6;CL:0002322!6.79e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.67e-16;6!CL:0000404;9.67e-16;6!CL:0002322;1.71e-14;5!CL:0002321;1.97e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.59e-16,8;CL:0000540,1.06e-15,6;CL:0000031,1.06e-15,6;CL:0000404,1.06e-15,6;CL:0002322,2.02e-14,5 | |||
|ontology_enrichment_development_v019=CL:0000031;9.67e-16;6!UBERON:0006601;2.06e-13;82!UBERON:0006215;2.11e-10;3!UBERON:0003056;1.89e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.30e-57!82;UBERON:0000073!1.14e-56!94;UBERON:0001016!1.14e-56!94;UBERON:0005743!8.15e-56!86;UBERON:0001049!9.38e-51!57;UBERON:0005068!9.38e-51!57;UBERON:0006241!9.38e-51!57;UBERON:0007135!9.38e-51!57;UBERON:0002616!8.08e-42!59;UBERON:0000955!5.79e-41!69;UBERON:0006238!5.79e-41!69;UBERON:0003075!8.84e-40!86;UBERON:0007284!8.84e-40!86;UBERON:0002780!6.06e-39!41;UBERON:0001890!6.06e-39!41;UBERON:0006240!6.06e-39!41;UBERON:0003080!9.51e-38!42;UBERON:0002346!3.14e-37!90;UBERON:0002020!6.27e-35!34;UBERON:0003528!6.27e-35!34;UBERON:0001893!9.75e-35!34;UBERON:0002791!2.51e-33!33;UBERON:0001869!1.36e-32!32;UBERON:0003056!6.64e-31!61;UBERON:0001950!4.98e-28!20;UBERON:0002619!8.04e-28!22;UBERON:0004121!2.15e-26!169;UBERON:0007023!3.92e-26!115;UBERON:0000924!2.63e-25!173;UBERON:0006601!2.63e-25!173;UBERON:0000956!9.11e-24!25;UBERON:0000203!9.11e-24!25;UBERON:0000033!1.69e-22!123;UBERON:0000153!1.07e-20!129;UBERON:0007811!1.07e-20!129;UBERON:0003076!1.09e-13!15;UBERON:0003057!1.09e-13!15;UBERON:0002308!9.55e-13!9;UBERON:0000125!9.55e-13!9;UBERON:0002420!1.74e-12!9;UBERON:0007245!1.74e-12!9;UBERON:0010009!1.74e-12!9;UBERON:0010011!1.74e-12!9;UBERON:0000454!1.74e-12!9;UBERON:0004732!2.05e-11!13;UBERON:0004733!2.88e-10!12;UBERON:0002028!2.88e-10!12;UBERON:0007277!2.88e-10!12;UBERON:0000200!3.70e-10!6;UBERON:0009663!4.86e-10!7;UBERON:0001871!1.32e-09!7;UBERON:0002298!4.81e-09!8;UBERON:0001872!6.79e-09!5;UBERON:0002021!7.72e-09!5;UBERON:0000025!4.49e-08!194;UBERON:0000369!7.24e-07!4;UBERON:0002435!7.24e-07!4;UBERON:0000204!7.24e-07!4;UBERON:0010082!7.24e-07!4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,1.15106533222573,0.829050053357545,1.73881851441031,0,0,0,0.906474741580529,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,12.5632917313483,10.4698516973973,7.43641234364918,2.59152637538426,3.02785021050754,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,6.50699269288109,6.18631050222156,3.18280904135263,4.46557126157214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.47003968731907,0,0,6.42352300414798,3.02699560786571,5.11015485228392,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,2.81338832821025,0,0,0,0,0,0,0,0,0,0,0,7.67358555340308,0,0,0,3.87733098438087,2.04089815956073,3.99227596002388,0,0,0,0.1137934482855,0,0,0,0,5.72962483279864,1.77148277162768,4.70326110639091,44.2487035319541,76.9631649121323,61.4739047423379,3.07139556015562,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.606610196826093,0,0.702793337176017,0,0,0,0,0,2.75465485467441,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0.0882561266915003,26.6657274121028,0,0,4.17851253308799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,3.81369537112412,1.12527203925513,2.88832816854191,2.49264202817511,0,0,5.77120788251234,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58565912723101,5.55376927319298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.56255156294123,7.51145584238999,0.573409195690071,5.65738162837947,3.16691655001056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57202304140731,0,0.132864840313363,0,0,0,0,0,0.746842107858986,0,0,0,0.139879507719444,0,17.6494232399039,0.754773679776773,0,1.31051565830417,0,0,0,0,0,0,0,0,0,3.53260738030527,2.8339315265117,11.8129055702292,3.07674546361133,4.53729053199093,11.2726321516675,3.87541549516443,1.42769420259154,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,4.38994300019565,2.34323429584154,11.9878341970687,6.02450196842115,4.37579847214576,0,0,0,0,28.9278991374275,39.0089117773836,0,0,0,0,0,3.33051691586475,7.89273282754189,0,0,0,1.57115589916002,0,0,0,0,28.6620942148392,39.6614165449144,6.50951982061501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,39.7984670618453,0.452888530700021,0.0771741581079447,0,0,0,0.471353094203252,1.37415926980462,0.891139200981258,1.6906229103336,0,0,0,0,0,0,0,0,0,0.286679166302903,0,6.39120007794598,3.49080552272302,0,0,0,0,0,0,0,0.407955318967927,2.6721740526556,0.18378979906969,0,0,0,0.829169439458779,2.27552590896169,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:9764145..9764235,- | |||
}} |
Revision as of 06:28, 14 September 2013
Short description: | p@chr8:9764145..9764235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:9764145..9764235, - |
Coexpression cluster: | C2673_cerebellum_small_pineal_retinoblastoma_retina_eye_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.59e-16 | 8 |
neuron | 1.06e-15 | 6 |
neuroblast | 1.06e-15 | 6 |
electrically signaling cell | 1.06e-15 | 6 |
embryonic stem cell | 2.02e-14 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.