FFCP PHASE1:Hg19::chrX:13835472..13835483,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2824|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4461|TSSclassifier=S|UniProt=Q13491|association_with_transcript=-7bp_to_ENST00000356942_5end|coexpression_cluster_id=C35|description=CAGE_peak_10_at_GPM6B_5end|id=chrX:13835472..13835483,-|ontology_enrichment_celltype=CL:0000128!4.41e-12!7;CL:0000126!4.41e-12!7;CL:0000127!4.41e-12!7;CL:0002453!4.41e-12!7;CL:0002319!2.05e-10!25;CL:0002605!2.04e-08!3;CL:0000047!1.02e-07!8|ontology_enrichment_celltype_v019=CL:0002605;1.50e-12;3!CL:0002319;2.51e-10;25!CL:0000128;3.50e-09;7!CL:0000126;3.50e-09;7!CL:0000127;3.50e-09;7!CL:0000047;7.63e-09;2|ontology_enrichment_celltype_v019_2=CL:0002605,9.05e-13,3;CL:0000047,3.43e-12,8;CL:0002319,2.59e-10,25;CL:0000128,2.57e-09,7;CL:0000126,2.57e-09,7;CL:0000127,2.57e-09,7;CL:0002453,2.57e-09,7|ontology_enrichment_development_v019=UBERON:0006601;8.56e-14;82!UBERON:0010122;5.06e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.89e-109!57;UBERON:0005068!2.89e-109!57;UBERON:0006241!2.89e-109!57;UBERON:0007135!2.89e-109!57;UBERON:0001017!9.20e-101!82;UBERON:0005743!1.01e-98!86;UBERON:0002616!6.67e-93!59;UBERON:0000073!2.53e-91!94;UBERON:0001016!2.53e-91!94;UBERON:0002780!1.01e-88!41;UBERON:0001890!1.01e-88!41;UBERON:0006240!1.01e-88!41;UBERON:0003080!2.26e-86!42;UBERON:0003075!1.24e-85!86;UBERON:0007284!1.24e-85!86;UBERON:0000955!3.24e-83!69;UBERON:0006238!3.24e-83!69;UBERON:0002346!3.67e-81!90;UBERON:0001893!7.13e-73!34;UBERON:0002020!1.42e-72!34;UBERON:0003528!1.42e-72!34;UBERON:0002791!1.54e-70!33;UBERON:0001869!6.95e-69!32;UBERON:0003056!2.60e-65!61;UBERON:0004121!1.22e-54!169;UBERON:0000924!5.33e-53!173;UBERON:0006601!5.33e-53!173;UBERON:0000956!1.47e-51!25;UBERON:0000203!1.47e-51!25;UBERON:0000033!9.36e-51!123;UBERON:0007023!2.17e-49!115;UBERON:0000153!1.02e-47!129;UBERON:0007811!1.02e-47!129;UBERON:0002619!1.04e-44!22;UBERON:0001950!3.76e-40!20;UBERON:0000025!1.12e-26!194;UBERON:0002420!4.34e-23!9;UBERON:0007245!4.34e-23!9;UBERON:0010009!4.34e-23!9;UBERON:0010011!4.34e-23!9;UBERON:0000454!4.34e-23!9;UBERON:0003076!7.80e-23!15;UBERON:0003057!7.80e-23!15;UBERON:0002308!5.00e-22!9;UBERON:0000125!5.00e-22!9;UBERON:0004111!1.63e-19!241;UBERON:0004732!3.83e-19!13;UBERON:0009663!4.01e-18!7;UBERON:0000483!1.99e-17!309;UBERON:0000119!4.17e-17!312;UBERON:0004733!5.64e-17!12;UBERON:0002028!5.64e-17!12;UBERON:0007277!5.64e-17!12;UBERON:0001894!1.13e-16!7;UBERON:0006222!1.13e-16!7;UBERON:0000477!1.45e-16!286;UBERON:0000064!1.47e-16!219;UBERON:0001871!1.17e-15!7;UBERON:0000200!2.04e-15!6;UBERON:0000349!1.31e-13!5;UBERON:0002298!3.99e-13!8;UBERON:0002021!1.08e-12!5;UBERON:0000475!2.37e-12!365;UBERON:0000369!9.95e-12!4;UBERON:0002435!9.95e-12!4;UBERON:0000204!9.95e-12!4;UBERON:0010082!9.95e-12!4;UBERON:0002680!2.16e-11!9;UBERON:0001895!2.16e-11!9;UBERON:0010092!2.16e-11!9;UBERON:0003296!6.05e-10!4;UBERON:0010133!6.05e-10!4;UBERON:0005383!2.71e-09!3;UBERON:0005382!2.71e-09!3;UBERON:0000062!2.93e-09!511;UBERON:0000481!5.53e-09!347;UBERON:0002771!8.91e-09!3;UBERON:0000922!1.61e-08!612;UBERON:0001872!2.20e-08!5;UBERON:0002240!1.04e-07!3;UBERON:0001896!1.58e-07!3;UBERON:0005290!1.58e-07!3;UBERON:0010096!1.58e-07!3;UBERON:0000988!1.73e-07!3;UBERON:0006331!2.08e-07!3;UBERON:0000923!3.00e-07!604;UBERON:0005291!3.00e-07!604;UBERON:0006598!3.00e-07!604;UBERON:0002532!3.00e-07!604;UBERON:0002050!3.31e-07!605;UBERON:0005423!3.31e-07!605;UBERON:0000467!6.98e-07!625;UBERON:0000480!7.67e-07!626;UBERON:0001873!9.95e-07!2;UBERON:0010122!9.95e-07!2|ontology_enrichment_uberon_v019=UBERON:0001869;6.73e-101;32!UBERON:0002791;1.16e-96;32!UBERON:0003528;5.14e-92;34!UBERON:0002020;5.14e-92;34!UBERON:0001893;1.79e-91;34!UBERON:0000956;4.57e-84;25!UBERON:0000203;4.57e-84;25!UBERON:0002780;4.06e-80;41!UBERON:0001890;4.06e-80;41!UBERON:0002619;5.53e-73;22!UBERON:0001950;1.43e-65;20!UBERON:0000073;5.53e-51;53!UBERON:0002616;5.53e-51;53!UBERON:0001017;3.36e-34;75!UBERON:0000955;1.34e-33;68!UBERON:0002420;5.02e-30;9!UBERON:0007245;5.02e-30;9!UBERON:0010009;5.02e-30;9!UBERON:0010011;5.02e-30;9!UBERON:0000454;5.02e-30;9!UBERON:0001016;4.52e-29;83!UBERON:0000200;3.86e-24;6!UBERON:0000125;1.75e-22;9!UBERON:0002308;1.75e-22;9!UBERON:0009663;5.26e-22;7!UBERON:0001871;2.84e-21;6!UBERON:0000349;3.85e-21;5!UBERON:0002021;5.04e-20;5!UBERON:0000369;3.72e-18;4!UBERON:0002435;3.72e-18;4!UBERON:0000204;3.72e-18;4!UBERON:0005383;3.33e-14;3!UBERON:0005382;3.33e-14;3!UBERON:0001872;6.05e-13;5!UBERON:0001870;8.17e-13;3!UBERON:0007023;1.49e-11;114!UBERON:0011216;2.77e-10;132!UBERON:0001873;5.06e-10;2!UBERON:0001876;6.55e-10;2!UBERON:0001894;8.04e-10;7!UBERON:0002771;1.19e-09;2!UBERON:0001875;2.23e-09;2!UBERON:0006514;2.23e-09;2!UBERON:0002702;4.15e-09;2!UBERON:0001954;5.19e-09;2!UBERON:0003022;5.19e-09;2!UBERON:0002421;5.19e-09;2!UBERON:0002600;5.19e-09;2!UBERON:0010314;8.28e-09;132|ontology_enrichment_uberon_v019_2=UBERON:0001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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |||
|TSSclassifier=S | |||
|UniProt=Q13491 | |||
|association_with_transcript=-7bp_to_ENST00000356942_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_10_at_GPM6B_5end | |||
|id=chrX:13835472..13835483,- | |||
|ontology_enrichment_celltype=CL:0000128!4.41e-12!7;CL:0000126!4.41e-12!7;CL:0000127!4.41e-12!7;CL:0002453!4.41e-12!7;CL:0002319!2.05e-10!25;CL:0002605!2.04e-08!3;CL:0000047!1.02e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.50e-12;3!CL:0002319;2.51e-10;25!CL:0000128;3.50e-09;7!CL:0000126;3.50e-09;7!CL:0000127;3.50e-09;7!CL:0000047;7.63e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.05e-13,3;CL:0000047,3.43e-12,8;CL:0002319,2.59e-10,25;CL:0000128,2.57e-09,7;CL:0000126,2.57e-09,7;CL:0000127,2.57e-09,7;CL:0002453,2.57e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.56e-14;82!UBERON:0010122;5.06e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@GPM6B | |||
}} |
Revision as of 10:57, 14 September 2013
Short description: | p10@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_GPM6B_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -7bp_to_ENST00000356942_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | Q13491 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.05e-13 | 3 |
neuronal stem cell | 3.43e-12 | 8 |
neural cell | 2.59e-10 | 25 |
oligodendrocyte | 2.57e-09 | 7 |
macroglial cell | 2.57e-09 | 7 |
astrocyte | 2.57e-09 | 7 |
oligodendrocyte precursor cell | 2.57e-09 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.