FFCP PHASE1:Hg19::chr13:58204232..58204248,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:58204232..58204248,+ | |||
|coexpression_cluster_id=C2267 | |||
|description=CAGE_peak_at_chr13:58204232..58204248,+ | |||
|id=chr13:58204232..58204248,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.45e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.74e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.75e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.13e-43!94;UBERON:0001016!7.13e-43!94;UBERON:0005743!1.80e-41!86;UBERON:0007023!2.27e-41!115;UBERON:0001017!6.38e-40!82;UBERON:0001049!4.57e-39!57;UBERON:0005068!4.57e-39!57;UBERON:0006241!4.57e-39!57;UBERON:0007135!4.57e-39!57;UBERON:0002346!6.66e-38!90;UBERON:0003075!4.81e-35!86;UBERON:0007284!4.81e-35!86;UBERON:0002616!5.13e-34!59;UBERON:0000955!7.86e-33!69;UBERON:0006238!7.86e-33!69;UBERON:0003080!3.27e-29!42;UBERON:0002780!5.83e-29!41;UBERON:0001890!5.83e-29!41;UBERON:0006240!5.83e-29!41;UBERON:0000924!1.14e-27!173;UBERON:0006601!1.14e-27!173;UBERON:0004121!2.18e-25!169;UBERON:0002020!2.76e-25!34;UBERON:0003528!2.76e-25!34;UBERON:0001893!3.22e-25!34;UBERON:0002791!1.86e-24!33;UBERON:0001869!6.30e-24!32;UBERON:0003056!8.75e-24!61;UBERON:0000025!9.09e-23!194;UBERON:0000153!2.01e-19!129;UBERON:0007811!2.01e-19!129;UBERON:0000033!3.91e-19!123;UBERON:0000956!6.63e-19!25;UBERON:0000203!6.63e-19!25;UBERON:0002619!4.49e-18!22;UBERON:0001950!1.57e-16!20;UBERON:0000483!3.07e-16!309;UBERON:0000119!3.60e-16!312;UBERON:0004111!2.08e-15!241;UBERON:0000477!5.32e-13!286;UBERON:0000468!1.09e-12!659;UBERON:0000922!1.38e-11!612;UBERON:0003076!8.77e-11!15;UBERON:0003057!8.77e-11!15;UBERON:0000064!9.12e-11!219;UBERON:0000475!1.43e-10!365;UBERON:0000467!1.80e-10!625;UBERON:0000480!2.57e-10!626;UBERON:0000481!7.98e-10!347;UBERON:0002050!1.28e-09!605;UBERON:0005423!1.28e-09!605;UBERON:0000923!2.50e-09!604;UBERON:0005291!2.50e-09!604;UBERON:0006598!2.50e-09!604;UBERON:0002532!2.50e-09!604;UBERON:0004732!2.78e-09!13;UBERON:0004733!9.92e-09!12;UBERON:0002028!9.92e-09!12;UBERON:0007277!9.92e-09!12;UBERON:0002420!6.28e-08!9;UBERON:0007245!6.28e-08!9;UBERON:0010009!6.28e-08!9;UBERON:0010011!6.28e-08!9;UBERON:0000454!6.28e-08!9;UBERON:0002308!8.18e-08!9;UBERON:0000125!8.18e-08!9;UBERON:0000062!2.19e-07!511;UBERON:0001871!3.77e-07!7;UBERON:0002680!9.35e-07!9;UBERON:0001895!9.35e-07!9;UBERON:0010092!9.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.84e-29;34!UBERON:0002020;5.84e-29;34!UBERON:0001869;6.27e-29;32!UBERON:0002791;8.33e-29;32!UBERON:0001893;9.35e-29;34!UBERON:0002780;9.43e-28;41!UBERON:0001890;9.43e-28;41!UBERON:0000073;1.66e-27;53!UBERON:0002616;1.66e-27;53!UBERON:0000956;5.12e-25;25!UBERON:0000203;5.12e-25;25!UBERON:0002619;5.88e-24;22!UBERON:0001950;7.31e-22;20!UBERON:0001017;8.71e-19;75!UBERON:0001016;3.02e-18;83!UBERON:0000955;6.10e-18;68!UBERON:0000922;2.46e-15;49!UBERON:0007023;2.87e-13;114!UBERON:0004732;3.94e-12;13!UBERON:0004733;2.17e-11;12!UBERON:0002028;2.17e-11;12!UBERON:0002420;3.23e-10;9!UBERON:0007245;3.23e-10;9!UBERON:0010009;3.23e-10;9!UBERON:0010011;3.23e-10;9!UBERON:0000454;3.23e-10;9!UBERON:0000125;4.63e-10;9!UBERON:0002308;4.63e-10;9!UBERON:0002680;1.01e-08;9!UBERON:0001895;1.01e-08;9!UBERON:0001871;3.20e-08;6!UBERON:0009663;4.39e-08;7!UBERON:0011216;2.54e-07;132!UBERON:0000200;2.59e-07;6!UBERON:0002298;4.04e-07;6!UBERON:0000349;7.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.70e-53,89;UBERON:0001049,3.78e-52,56;UBERON:0005068,3.78e-52,56;UBERON:0006241,3.78e-52,56;UBERON:0007135,3.78e-52,56;UBERON:0001017,1.02e-50,81;UBERON:0000073,3.96e-49,53;UBERON:0002616,3.96e-49,53;UBERON:0007023,4.53e-48,114;UBERON:0002346,1.07e-44,86;UBERON:0000955,3.73e-41,68;UBERON:0006238,3.73e-41,68;UBERON:0003075,6.30e-41,82;UBERON:0007284,6.30e-41,82;UBERON:0002780,9.23e-39,41;UBERON:0001890,9.23e-39,41;UBERON:0003080,9.23e-39,41;UBERON:0006240,9.23e-39,41;UBERON:0010371,2.81e-34,104;UBERON:0003528,9.21e-34,34;UBERON:0002020,9.21e-34,34;UBERON:0001893,1.14e-33,34;UBERON:0004121,2.06e-33,171;UBERON:0000924,2.06e-33,171;UBERON:0006601,2.06e-33,171;UBERON:0001869,6.48e-32,32;UBERON:0002791,1.03e-31,32;UBERON:0010314,1.12e-31,132;UBERON:0003056,4.77e-29,61;UBERON:0000956,4.36e-25,25;UBERON:0000203,4.36e-25,25;UBERON:0011216,3.73e-24,223;UBERON:0002619,5.87e-24,22;UBERON:0001950,7.35e-22,20;UBERON:0000025,6.61e-20,192;UBERON:0003076,4.62e-14,15;UBERON:0003057,4.62e-14,15;UBERON:0004111,1.37e-12,240;UBERON:0004732,4.98e-12,13;UBERON:0000483,5.47e-12,306;UBERON:0000119,1.44e-11,309;UBERON:0000922,1.46e-11,592;UBERON:0004733,2.79e-11,12;UBERON:0002028,2.79e-11,12;UBERON:0007277,2.79e-11,12;UBERON:0002420,3.39e-10,9;UBERON:0007245,3.39e-10,9;UBERON:0010009,3.39e-10,9;UBERON:0010011,3.39e-10,9;UBERON:0000454,3.39e-10,9;UBERON:0000125,4.84e-10,9;UBERON:0002308,4.84e-10,9;UBERON:0002050,1.02e-08,564;UBERON:0000923,1.08e-08,560;UBERON:0010316,1.08e-08,560;UBERON:0005291,1.08e-08,560;UBERON:0006598,1.08e-08,560;UBERON:0010317,1.08e-08,560;UBERON:0002532,1.08e-08,560;UBERON:0002680,1.30e-08,9;UBERON:0001895,1.30e-08,9;UBERON:0010092,1.30e-08,9;UBERON:0001871,3.14e-08,6;UBERON:0005423,3.41e-08,581;UBERON:0009663,4.59e-08,7;UBERON:0000200,2.54e-07,6;UBERON:0002298,4.04e-07,6;UBERON:0000349,7.62e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,9.23407935575909,2.04000691244253,9.09018692286455,2.57612388417951,4.92747930262383,1.38096903554283,0.0764134057479513,0.0821005894499457,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0.434377689410233,1.81619850790011,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.527008714158756,14.5386773802461,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0.347140501607594,2.82653970962005,0.838998872419812,4.95212475492121,0.626984899610432,0.775250277507987,0.35576626268671,1.00416183829401,0,0.760272105718513,0.24406205754817,0,1.62028389576352,0.892997282840798,2.46982309888787,6.75668882899933,3.06633274931766,0.949265659568129,1.09921046358244,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,2.1349799145941,0,0.311211035399766,2.02066008104532,1.30769522490767,0.151357427644931,0.576175924479999,0.70296429550139,0,1.1409436430889,1.19558944441441,0.704606991862589,0.809364721840658,0.98315564691574,0,0.491337269247072,0.413303124703062,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0.226864366320042,0.717558542755448,0.640672166455702,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0,0,0,0,0,1.77504796258307,1.0075209822764,0.169560592310488,0,0,0,2.92736894711029,1.06023814657188,3.60201222895507,3.93912009058408,3.5324919122588,1.45990943630332,1.56449532329816,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,4.20725321410337,0,0,0,0,8.27105869353966,0,0,0.171567810298526,0,0,0,0,1.3032332212413,0,0,5.33279862885353,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.288239906833923,0,0,0,0,3.4214489204541,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0.791951872933429,0,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,3.04913549066956,11.712586847186,6.95959931499926,2.68026024534958,4.46557126157214,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,2.0694614258501,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,5.68666920354483,1.19065593693561,2.37507507712353,3.08454505380579,0.541892875087706,0,0.254876273045038,0,0,0,0.261435451024901,1.02580050046556,3.93617574839647,2.60302715731442,5.35813260568156,0,0,0,0,0,2.70678011217942,0.154048617114644,0,0.413509717453592,0,0,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0.10115778085555,0,0.94443704049192,0,1.23213432070436,1.06461206063404,0.869932992075073,0,0,0,0,0.38126038784765,0,1.28381696410176,3.81843897511124,0.78494864019923,0,0.54907405947211,0,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0,3.3171948762061,2.63070531152258,0,1.31178950409327,0,0.6196469961995,0.845086807596724,0,0,0,0,0,0,0,0,0,0.670302275535787,0,6.7783536559281,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,1.02555725490326,3.88353669598443,0,0,0.71623345421307,3.56357616999166,0.614321404198464,133.215784800684,40.5127919262277,0,0,12.4563990795516,8.76691148304707,1.38141957765574,0,45.8163697609654,0.246169610922139,0,0,0,0,3.15658898038188,0,0,17.4479894297139,21.4294306753876,51.8995874803105,0,0,2.17499872630438,0.1137934482855,0.254253650292766,0,0,2.04123229368278,2.95162491386597,18.6005691020906,20.2602016890685,16.7839909948792,17.0292060294086,11.8219047581419,14.0406654178542,0,0,5.38651809526579,0,0,0,0.108647371922008,0,0.0915975934018623,2.66517388009317,0,0.470940769185074,0,0,0,0,0,0.317873157960757,0.421996129056054,0.326465616318295,0,0,0.995261931078505,1.32686346755009,6.11030144933625,0,0,0,19.2767240324736,12.0386647094818,27.64320459559,0,0,0,0.394584402849391,12.0990716048664,23.8736754071782,16.4916972830354,2.25485129121739,0.414752765588989,5.31723098165748,2.31694369112849,5.33685961292283,4.77889719091835,0.284609546029793,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,2.13375836274523,0,3.38971111170799,0,0,30.5791144466894,0,0,4.4825128895264,0,0,0,0.686379991447858,0,0,0,0,0,0,0.288950589901519,39.0273187661363,15.7441185725792,0,2.14882720709979,0,3.90995361781156,2.7499250881402,2.87149209830726,1.39775300349294,1.28767814440971,3.57074331906996,14.3772631121594,0,0,0,0,0,0,0,42.9424032497024,36.0939026195675,2.57205037544031,2.47570985875021,2.49264202817511,0.2249738915515,0,42.5246896606173,0,1.57611414598396,9.65164421683965,0,0,0,5.00286728461357,6.62091970365432,0,0,0,2.28611152076586,0,2.21649806023215,0,0,3.81035807563014,1.32506888912221,31.2864754394952,33.4548482409006,1.19760786519031,0,55.2090922974982,62.4101091245674,23.1973870994429,2.48083010905975,0,0,0,3.26410682021684,5.013797880454,2.14441903734423,3.93447156851765,2.04170325125305,42.5312726384153,29.774408636079,23.6610859035285,29.2438689801936,15.751925318233,21.857933835367,1.52183498429854,0,3.7912279385412,2.56918800190471,0,0,10.8690771458119,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,6.30924491143255,0,7.5054556981224,2.08795433572169,0,0,2.93684045407761,0,2.47041157728778,0,0.176689145945881,0,0.337884881306145,0,0,0,16.8675292105112,0.194860308839388,0.132864840313363,0,0.655219697692825,0,0,0,0.106691729694141,0,2.27006381426734,1.10463570151104,0,6.8428498603627,9.84786659038118,12.7233277448085,295.974502572797,18.1287999398743,64.1588963226215,93.5329648447405,4.58562327758308,29.0495357346087,0,0,3.20228299314188,0.352675943690684,0,35.7114491536315,26.9223495018611,18.6771615096867,26.0497782585759,72.3445768156331,18.9490871751957,37.946776723485,9.99385941814081,0,0,0,0,0,0,0,4.06135773085989,0,3.90757005616546,0,0,0,33.8363298938157,32.0242020431677,21.0820532431208,34.688448176067,67.8248763182592,0,0.992422356778588,29.3704978080566,0,5.35701835878287,2.35398605553177,6.06965604236632,2.95960848756687,2.66107110487917,0.115233987555779,0,17.4002516420689,26.572200519391,0,0.556157009460346,0.470958557103084,41.4785157378245,0,28.3079203357944,0,0,3.85973338553944,0.158013611732727,0,0,0,0,0,0,1.29068207646083,0,0,0,0,1.5510319283216,0,2.12525320415805,0,0,2.58971534875158,0.718639647993729,12.7579587447202,6.79995390282795,0,0,0.83244063544298,0,5.16720428703517,0.150962843566674,2.62392137567012,6.55678681511872,0,2.20633489578515,0,22.9680906524486,17.8227840196252,37.1937040273392,0,152.065979291403,110.09407265887,0,0,0,0,8.76403665895821,2.75237570042724,15.3373353972053,0.315543124386369,32.2959578406845,26.617392110763,15.870805215462,0,0,0,0.126166424835079,0.327796715891087,2.02717601618299,0.815910637935854,0.801652215796681,6.24885316836945,1.75495277504663,10.2301242594623,17.1497043299954,33.1667775783512,16.9630113213508,1.27940389140589,15.9503169080706,0.193766729508018,4.09693114352662,0,2.16400338145761,25.8710001866521,0.435433495793923,14.0315653444965,0.875576689189638,3.37094365345579,3.99192427855216,0,0.960546112899439,5.7921684686082,0,0,7.33448665097199,6.10344267473608,0,1.40891655513718,0 | |||
|short_description=p@chr13:58204232..58204248,+ | |||
}} |
Latest revision as of 16:52, 24 July 2015
Short description: | p@chr13:58204232..58204248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:58204232..58204248, + |
Coexpression cluster: | C2267_neuroblastoma_spleen_amygdala_neuroectodermal_lung_occipital_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.75e-08 | 10 |