FFCP PHASE1:Hg19::chrX:48931650..48931681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11230 | |EntrezGene=11230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28911 | |HGNC=28911 | ||
|TSSclassifier=strong | |||
|UniProt=O60831 | |UniProt=O60831 | ||
|association_with_transcript=0bp_to_NM_007213,uc004dmi.2_5end | |association_with_transcript=0bp_to_NM_007213,uc004dmi.2_5end | ||
|cluster_id=chrX:48931650..48931681,- | |||
|coexpression_cluster_id=C1142 | |coexpression_cluster_id=C1142 | ||
|description=CAGE_peak_1_at_PRAF2_5end | |description=CAGE_peak_1_at_PRAF2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.24e-33!180;CL:0000183!1.35e-20!59;CL:0000680!7.52e-19!57;CL:0000056!7.52e-19!57;CL:0000355!7.52e-19!57;CL:0000187!1.12e-18!54;CL:0000192!2.86e-17!42;CL:0000514!2.86e-17!42;CL:0000393!1.70e-16!60;CL:0000211!1.70e-16!60;CL:0000359!2.91e-14!32;CL:0000222!3.55e-14!119;CL:0000057!2.18e-11!75;CL:0000220!3.30e-10!246;CL:0002321!3.76e-10!248 | |ontology_enrichment_celltype=CL:0000055!5.24e-33!180;CL:0000183!1.35e-20!59;CL:0000680!7.52e-19!57;CL:0000056!7.52e-19!57;CL:0000355!7.52e-19!57;CL:0000187!1.12e-18!54;CL:0000192!2.86e-17!42;CL:0000514!2.86e-17!42;CL:0000393!1.70e-16!60;CL:0000211!1.70e-16!60;CL:0000359!2.91e-14!32;CL:0000222!3.55e-14!119;CL:0000057!2.18e-11!75;CL:0000220!3.30e-10!246;CL:0002321!3.76e-10!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.62e-13;32!CL:0000192;8.32e-13;43!CL:0000187;2.93e-10;55!CL:0000393;5.19e-09;61!CL:0000211;5.19e-09;61 | |ontology_enrichment_celltype_v019=CL:0000359;1.62e-13;32!CL:0000192;8.32e-13;43!CL:0000187;2.93e-10;55!CL:0000393;5.19e-09;61!CL:0000211;5.19e-09;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.58e-19,58;CL:0000056,6.58e-19,58;CL:0000355,6.58e-19,58;CL:0000187,9.96e-19,55;CL:0000192,2.72e-17,43;CL:0000514,2.72e-17,43;CL:0000393,1.42e-16,61;CL:0000211,1.42e-16,61;CL:0000359,2.90e-14,32;CL:0000222,3.46e-14,121;CL:0000057,1.49e-11,76;CL:0002321,2.86e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;8.32e-13;43!CL:0000355;2.55e-10;58 | |ontology_enrichment_development_v019=CL:0000514;8.32e-13;43!CL:0000355;2.55e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.78e-25!312;UBERON:0000483!5.11e-24!309;UBERON:0000475!5.55e-24!365;UBERON:0000914!2.59e-18!83;UBERON:0002329!2.59e-18!83;UBERON:0003077!2.59e-18!83;UBERON:0003059!2.59e-18!83;UBERON:0007282!2.59e-18!83;UBERON:0009618!2.59e-18!83;UBERON:0007285!2.59e-18!83;UBERON:0000025!3.94e-18!194;UBERON:0000481!8.51e-18!347;UBERON:0000477!1.58e-17!286;UBERON:0004290!2.27e-17!70;UBERON:0001134!8.51e-17!61;UBERON:0002036!8.51e-17!61;UBERON:0003082!8.51e-17!61;UBERON:0002385!8.32e-16!63;UBERON:0001015!8.32e-16!63;UBERON:0000383!8.32e-16!63;UBERON:0000486!9.69e-16!82;UBERON:0004111!6.69e-15!241;UBERON:0003075!5.24e-14!86;UBERON:0007284!5.24e-14!86;UBERON:0004872!1.85e-13!84;UBERON:0002346!1.96e-13!90;UBERON:0002049!3.10e-13!79;UBERON:0007798!3.10e-13!79;UBERON:0001637!3.34e-13!42;UBERON:0003509!3.34e-13!42;UBERON:0004572!3.34e-13!42;UBERON:0005256!3.80e-13!143;UBERON:0005743!1.17e-12!86;UBERON:0004121!1.32e-12!169;UBERON:0000924!2.38e-12!173;UBERON:0006601!2.38e-12!173;UBERON:0001017!4.92e-12!82;UBERON:0000073!5.30e-12!94;UBERON:0001016!5.30e-12!94;UBERON:0000955!7.99e-12!69;UBERON:0006238!7.99e-12!69;UBERON:0003056!8.08e-12!61;UBERON:0002616!1.02e-11!59;UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0001981!1.21e-11!60;UBERON:0007500!1.21e-11!60;UBERON:0004537!1.21e-11!60;UBERON:0006965!1.21e-11!60;UBERON:0000033!1.27e-11!123;UBERON:0000468!2.57e-11!659;UBERON:0004573!6.72e-11!33;UBERON:0004571!6.72e-11!33;UBERON:0000055!7.16e-11!69;UBERON:0004535!9.54e-11!110;UBERON:0003914!1.79e-10!118;UBERON:0000153!2.29e-10!129;UBERON:0007811!2.29e-10!129;UBERON:0001009!4.64e-10!113;UBERON:0000922!1.77e-09!612;UBERON:0002050!2.20e-09!605;UBERON:0005423!2.20e-09!605;UBERON:0000923!2.65e-09!604;UBERON:0005291!2.65e-09!604;UBERON:0006598!2.65e-09!604;UBERON:0002532!2.65e-09!604;UBERON:0002100!2.82e-09!216;UBERON:0000064!3.65e-09!219;UBERON:0002780!3.67e-09!41;UBERON:0001890!3.67e-09!41;UBERON:0006240!3.67e-09!41;UBERON:0003080!8.02e-09!42;UBERON:0000467!1.27e-08!625;UBERON:0000480!1.91e-08!626;UBERON:0000490!2.45e-08!138;UBERON:0001893!3.48e-08!34;UBERON:0001869!6.48e-08!32;UBERON:0002791!6.99e-08!33;UBERON:0002020!7.89e-08!34;UBERON:0003528!7.89e-08!34;UBERON:0002619!6.18e-07!22 | |ontology_enrichment_uberon=UBERON:0000119!4.78e-25!312;UBERON:0000483!5.11e-24!309;UBERON:0000475!5.55e-24!365;UBERON:0000914!2.59e-18!83;UBERON:0002329!2.59e-18!83;UBERON:0003077!2.59e-18!83;UBERON:0003059!2.59e-18!83;UBERON:0007282!2.59e-18!83;UBERON:0009618!2.59e-18!83;UBERON:0007285!2.59e-18!83;UBERON:0000025!3.94e-18!194;UBERON:0000481!8.51e-18!347;UBERON:0000477!1.58e-17!286;UBERON:0004290!2.27e-17!70;UBERON:0001134!8.51e-17!61;UBERON:0002036!8.51e-17!61;UBERON:0003082!8.51e-17!61;UBERON:0002385!8.32e-16!63;UBERON:0001015!8.32e-16!63;UBERON:0000383!8.32e-16!63;UBERON:0000486!9.69e-16!82;UBERON:0004111!6.69e-15!241;UBERON:0003075!5.24e-14!86;UBERON:0007284!5.24e-14!86;UBERON:0004872!1.85e-13!84;UBERON:0002346!1.96e-13!90;UBERON:0002049!3.10e-13!79;UBERON:0007798!3.10e-13!79;UBERON:0001637!3.34e-13!42;UBERON:0003509!3.34e-13!42;UBERON:0004572!3.34e-13!42;UBERON:0005256!3.80e-13!143;UBERON:0005743!1.17e-12!86;UBERON:0004121!1.32e-12!169;UBERON:0000924!2.38e-12!173;UBERON:0006601!2.38e-12!173;UBERON:0001017!4.92e-12!82;UBERON:0000073!5.30e-12!94;UBERON:0001016!5.30e-12!94;UBERON:0000955!7.99e-12!69;UBERON:0006238!7.99e-12!69;UBERON:0003056!8.08e-12!61;UBERON:0002616!1.02e-11!59;UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0001981!1.21e-11!60;UBERON:0007500!1.21e-11!60;UBERON:0004537!1.21e-11!60;UBERON:0006965!1.21e-11!60;UBERON:0000033!1.27e-11!123;UBERON:0000468!2.57e-11!659;UBERON:0004573!6.72e-11!33;UBERON:0004571!6.72e-11!33;UBERON:0000055!7.16e-11!69;UBERON:0004535!9.54e-11!110;UBERON:0003914!1.79e-10!118;UBERON:0000153!2.29e-10!129;UBERON:0007811!2.29e-10!129;UBERON:0001009!4.64e-10!113;UBERON:0000922!1.77e-09!612;UBERON:0002050!2.20e-09!605;UBERON:0005423!2.20e-09!605;UBERON:0000923!2.65e-09!604;UBERON:0005291!2.65e-09!604;UBERON:0006598!2.65e-09!604;UBERON:0002532!2.65e-09!604;UBERON:0002100!2.82e-09!216;UBERON:0000064!3.65e-09!219;UBERON:0002780!3.67e-09!41;UBERON:0001890!3.67e-09!41;UBERON:0006240!3.67e-09!41;UBERON:0003080!8.02e-09!42;UBERON:0000467!1.27e-08!625;UBERON:0000480!1.91e-08!626;UBERON:0000490!2.45e-08!138;UBERON:0001893!3.48e-08!34;UBERON:0001869!6.48e-08!32;UBERON:0002791!6.99e-08!33;UBERON:0002020!7.89e-08!34;UBERON:0003528!7.89e-08!34;UBERON:0002619!6.18e-07!22 | ||
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| ||
|short_description=p1@PRAF2 | |short_description=p1@PRAF2 | ||
}} | }} |
Latest revision as of 21:00, 15 September 2015
Short description: | p1@PRAF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRAF2_5end |
Coexpression cluster: | C1142_Mesenchymal_Fibroblast_Pericytes_Smooth_Renal_Hepatic_Hair |
Association with transcript: | 0bp_to_NM_007213, uc004dmi.2_5end |
EntrezGene: | PRAF2 |
HGNC: | 28911 |
UniProt: | O60831 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.58e-19 | 58 |
myoblast | 6.58e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.58e-19 | 58 |
muscle cell | 9.96e-19 | 55 |
smooth muscle cell | 2.72e-17 | 43 |
smooth muscle myoblast | 2.72e-17 | 43 |
electrically responsive cell | 1.42e-16 | 61 |
electrically active cell | 1.42e-16 | 61 |
vascular associated smooth muscle cell | 2.90e-14 | 32 |
mesodermal cell | 3.46e-14 | 121 |
fibroblast | 1.49e-11 | 76 |
embryonic cell | 2.86e-10 | 250 |