FFCP PHASE1:Hg19::chr19:13135566..13135577,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4784 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-192bp_to_uc002mwg.1_5end | |||
|cluster_id=chr19:13135566..13135577,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_NFIX_5end | |||
|id=chr19:13135566..13135577,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.81e-09!180;CL:0000057!1.22e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.49e-07;25!CL:0002603;8.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.60e-07,25;CL:0002603,6.43e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.88e-13;82!UBERON:0006215;1.76e-08;3!UBERON:0006241;5.64e-07;3!UBERON:0003057;5.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.79e-07,3;DOID:127,4.79e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.29e-42!57;UBERON:0005068!2.29e-42!57;UBERON:0006241!2.29e-42!57;UBERON:0007135!2.29e-42!57;UBERON:0001017!2.78e-38!82;UBERON:0005743!2.37e-36!86;UBERON:0002616!2.69e-36!59;UBERON:0000073!3.75e-35!94;UBERON:0001016!3.75e-35!94;UBERON:0000955!3.86e-33!69;UBERON:0006238!3.86e-33!69;UBERON:0003075!1.07e-29!86;UBERON:0007284!1.07e-29!86;UBERON:0003080!1.20e-29!42;UBERON:0002780!4.42e-29!41;UBERON:0001890!4.42e-29!41;UBERON:0006240!4.42e-29!41;UBERON:0002346!2.43e-28!90;UBERON:0001893!4.81e-28!34;UBERON:0002020!1.16e-27!34;UBERON:0003528!1.16e-27!34;UBERON:0002791!4.34e-27!33;UBERON:0001869!2.29e-26!32;UBERON:0004121!8.82e-26!169;UBERON:0000924!3.55e-25!173;UBERON:0006601!3.55e-25!173;UBERON:0007023!6.76e-25!115;UBERON:0000033!2.44e-24!123;UBERON:0000153!6.54e-24!129;UBERON:0007811!6.54e-24!129;UBERON:0002619!3.34e-22!22;UBERON:0000956!7.33e-22!25;UBERON:0000203!7.33e-22!25;UBERON:0003056!1.05e-21!61;UBERON:0001950!1.87e-20!20;UBERON:0000475!1.24e-18!365;UBERON:0004111!1.01e-13!241;UBERON:0003076!1.21e-13!15;UBERON:0003057!1.21e-13!15;UBERON:0004732!4.20e-12!13;UBERON:0000483!4.24e-12!309;UBERON:0000119!1.24e-11!312;UBERON:0000477!1.95e-11!286;UBERON:0004733!2.05e-11!12;UBERON:0002028!2.05e-11!12;UBERON:0007277!2.05e-11!12;UBERON:0000025!2.58e-11!194;UBERON:0000468!1.22e-09!659;UBERON:0002680!4.69e-09!9;UBERON:0001895!4.69e-09!9;UBERON:0010092!4.69e-09!9;UBERON:0000481!1.55e-08!347;UBERON:0001871!3.84e-08!7;UBERON:0000467!7.58e-08!625;UBERON:0000480!9.58e-08!626;UBERON:0002298!1.65e-07!8;UBERON:0002308!2.91e-07!9;UBERON:0000125!2.91e-07!9;UBERON:0002420!3.15e-07!9;UBERON:0007245!3.15e-07!9;UBERON:0010009!3.15e-07!9;UBERON:0010011!3.15e-07!9;UBERON:0000454!3.15e-07!9;UBERON:0000200!3.68e-07!6;UBERON:0002037!8.04e-07!6;UBERON:0006215!8.04e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-45;22!UBERON:0000956;6.35e-43;25!UBERON:0000203;6.35e-43;25!UBERON:0001950;1.95e-41;20!UBERON:0001893;3.14e-39;34!UBERON:0003528;1.41e-38;34!UBERON:0002020;1.41e-38;34!UBERON:0001869;3.03e-38;32!UBERON:0002791;2.53e-37;32!UBERON:0000073;3.40e-36;53!UBERON:0002616;3.40e-36;53!UBERON:0002780;4.85e-33;41!UBERON:0001890;4.85e-33;41!UBERON:0001017;9.32e-26;75!UBERON:0004732;1.41e-25;13!UBERON:0000955;2.89e-25;68!UBERON:0004733;5.54e-24;12!UBERON:0002028;5.54e-24;12!UBERON:0001016;6.06e-23;83!UBERON:0002680;1.14e-18;9!UBERON:0001895;1.14e-18;9!UBERON:0000200;1.81e-14;6!UBERON:0002037;1.47e-13;6!UBERON:0002021;9.51e-13;5!UBERON:0001872;1.41e-12;5!UBERON:0002298;3.96e-12;6!UBERON:0001871;2.89e-11;6!UBERON:0007023;3.10e-10;114!UBERON:0011216;1.01e-09;132!UBERON:0001870;4.64e-08;3!UBERON:0000349;2.17e-07;5!UBERON:0001896;5.64e-07;3!UBERON:0002240;5.64e-07;3!UBERON:0005174;5.64e-07;3!UBERON:0005290;5.64e-07;3!UBERON:0001137;5.64e-07;3!UBERON:0000988;8.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.84e-73,56;UBERON:0005068,1.84e-73,56;UBERON:0006241,1.84e-73,56;UBERON:0007135,1.84e-73,56;UBERON:0001017,3.41e-72,81;UBERON:0001016,1.99e-68,89;UBERON:0000073,4.69e-68,53;UBERON:0002616,4.69e-68,53;UBERON:0000955,2.14e-60,68;UBERON:0006238,2.14e-60,68;UBERON:0003075,2.76e-50,82;UBERON:0007284,2.76e-50,82;UBERON:0002346,2.65e-47,86;UBERON:0001893,1.51e-45,34;UBERON:0002619,1.71e-45,22;UBERON:0002780,2.14e-45,41;UBERON:0001890,2.14e-45,41;UBERON:0003080,2.14e-45,41;UBERON:0006240,2.14e-45,41;UBERON:0003528,8.58e-45,34;UBERON:0002020,8.58e-45,34;UBERON:0010371,6.61e-44,104;UBERON:0000956,9.00e-43,25;UBERON:0000203,9.00e-43,25;UBERON:0001869,8.18e-42,32;UBERON:0002791,1.58e-41,32;UBERON:0001950,1.94e-41,20;UBERON:0004121,1.24e-37,171;UBERON:0000924,1.24e-37,171;UBERON:0006601,1.24e-37,171;UBERON:0003056,2.22e-31,61;UBERON:0003076,2.11e-29,15;UBERON:0003057,2.11e-29,15;UBERON:0010314,6.94e-29,132;UBERON:0007023,9.58e-27,114;UBERON:0011216,2.53e-26,223;UBERON:0004732,7.69e-26,13;UBERON:0004733,3.00e-24,12;UBERON:0002028,3.00e-24,12;UBERON:0007277,3.00e-24,12;UBERON:0002680,8.25e-19,9;UBERON:0001895,8.25e-19,9;UBERON:0010092,8.25e-19,9;UBERON:0000025,2.12e-16,192;UBERON:0000200,1.85e-14,6;UBERON:0002037,1.11e-13,6;UBERON:0006215,1.11e-13,6;UBERON:0002021,8.57e-13,5;UBERON:0001872,1.56e-12,5;UBERON:0002298,2.85e-12,6;UBERON:0004111,6.87e-12,240;UBERON:0001871,2.92e-11,6;UBERON:0000483,3.49e-10,306;UBERON:0000119,6.06e-10,309;UBERON:0001870,4.51e-08,3;UBERON:0000349,1.74e-07,5;UBERON:0001896,4.22e-07,3;UBERON:0005290,4.22e-07,3;UBERON:0010096,4.22e-07,3;UBERON:0000988,8.09e-07,3;UBERON:0002240,8.61e-07,3;UBERON:0005174,8.61e-07,3;UBERON:0001137,8.61e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,1.63200552995402,3.44800193625897,0,0.547497700291537,1.12988375635323,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,1.01392563272577,0,0.486634870302636,0.567208902984407,0.221729397462564,0.087834785693126,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0,1.36221684880438,0,0.468642863667593,0,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0,0,0.358779271377724,0.640672166455702,0.847727604638247,1.50045548042201,0.721367704669072,0.772921620136887,0.37223371266318,0.506328996723799,1.26668106709558,1.26216887122057,1.19664868234989,0.323292113637624,0,0.201504196455281,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0,0,1.03993478527958,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,1.52456774533478,2.60279707715243,2.31986643833309,3.01529277601828,2.55175500661265,0,0,0,0.12269149171914,0,0.271265023699736,0,1.24900292158013,0.157702415033935,1.28855556491985,0.300946099727719,0,0,0,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,0.896974044789907,0.511707249066704,0.321707842287215,0,0.462629081407967,0.177561725313127,0.492762936082855,0.519254429183621,0.232420756919918,0,0.200506470303285,0.368323955743585,0.114814448164607,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0.192190067365106,0.127612712494584,0,0.929691098594572,0.94443704049192,1.3940745403212,0,0.532306030317022,0,1.66791797193528,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.545999645631943,0.282810863907425,0,1.65409603063837,0.66343897524122,1.75380354101505,2.31510213706675,1.9676842561399,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0.994147647766298,1.82870241333667,0,0,0.63337622438398,0.996239941255349,0,0,0,0,0,0.539210106883961,0,0,0.197286811273867,0,0,5.81599647657131,7.4214478529481,3.99227596002388,0,0,0.724999575434793,0,0,0,1.03423011972439,0,0.520874984799877,1.77148277162768,0.482385754501632,33.5679819897583,24.4380164448006,15.9595714234916,6.80094731177315,0,0,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,0,0,0,0,3.10045211711114,0,1.63985112007737,0,0,0,0.394584402849391,1.20990716048664,10.4064738954367,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,9.62324098529356,0,0,0,0,0,0,0,0,0,0,0,0,0.815985741090574,0,0.600420288709789,0.958337652243951,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,5.56660782866512,3.13267834056624,0,0,0,0,0,8.32268926214938,0,0.0788057072991982,0,0,0,0,0,0,0,2.71499800876856,1.72844298240254,1.95952416065645,0,0,0,0,0,0,1.93924434542326,1.05786081394152,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,11.5188863395708,9.51804866235313,8.76336514945499,1.72022758707021,2.99508439149501,2.17337410294842,0,0,0,0,0,1.40500471742064,1.30428925749743,0.447764408660622,0.701139929541673,0.554805861502613,0,0.251567901752575,0,0,0.302461847526478,0.932623203496683,0.295710299979268,0.318593534327405,0,0,1.24411862352257,0.265841714557995,0,0,0,0,0,0.537052785212442,0,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0.358177682162975,0,0.438568099157414,0.353378291891762,0,0.506827321959218,0,0,0.303859956177382,6.63640493528308,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,1.40172254815686,0,0,0,0,0,0,0,0,0,0.705351887381368,0,5.52371335829552,19.8375206855819,10.6954685568291,17.2297745962234,10.8390829375339,20.3322322244801,9.36558744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| |||
|short_description=p9@NFIX | |||
}} |
Latest revision as of 23:12, 15 September 2015
Short description: | p9@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NFIX_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -192bp_to_uc002mwg.1_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.60e-07 | 25 |
astrocyte of the cerebellum | 6.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.79e-07 | 3 |
leiomyoma | 4.79e-07 | 3 |